RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 KCNH4Q9UQ05 1017 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 NTNG1Q9Y2I2 539 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 STARD13Q9Y3M8 1113 aa-0.34□□□□□ -2.46
CDKL5-210ENST00000636046 PRSS44E7EML9 344 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 BNIP3LO60238 219 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 SEMA7AO75326 666 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 RECQL4O94761 1208 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 BMP15O95972 392 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 F11P03951 625 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 C1SP09871 688 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 NR4A1P22736 598 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 FBLN1P23142 703 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 UVSSAQ2YD98 709 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 KRTAP24-1Q3LI83 254 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 MSS51Q4VC12 460 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 MIIPQ5JXC2 388 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 ZDHHC20Q5W0Z9 365 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 SP5Q6BEB4 398 aaPredicted RBP-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 SLC23A3Q6PIS1 610 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 NUDT18Q6ZVK8 323 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 GDF7Q7Z4P5 450 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 C1QL2Q7Z5L3 287 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 FBXO11Q86XK2 927 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 SPAG16Q8N0X2 631 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 TMEM130Q8N3G9 435 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 LINC01356Q8N9X3 169 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 LRRN4Q8WUT4 740 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 AJUBAQ96IF1 538 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 AGBL1Q96MI9 1066 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 ZNF778Q96MU6 729 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 NECAB3Q96P71 396 aaPredicted RBP-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 ARXQ96QS3 562 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 TRAF4Q9BUZ4 470 aaPredicted RBP-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 MRPL18Q9H0U6 180 aaKnown RBP-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 ZNF395Q9H8N7 513 aaPredicted RBP-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 LRRC4CQ9HCJ2 640 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 SLC2A4RGQ9NR83 387 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 ZNHIT2Q9UHR6 403 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 PRR12Q9ULL5 1215 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 CBLCQ9ULV8 474 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 PROCRQ9UNN8 238 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 PHF8Q9UPP1 1060 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 CTNND2Q9UQB3 1225 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 SLC27A5Q9Y2P5 690 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 IRAK3Q9Y616 596 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 COL3A1P02461 1466 aaPredicted RBP-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 USP24Q9UPU5 2620 aa-0.35□□□□□ -2.47
CDKL5-210ENST00000636046 TP53BP1Q12888 1972 aaPredicted RBP-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 IGKV2D-30A0A075B6S6 120 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 IGKV3D-20A0A0C4DH25 116 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 EVI5O60447 810 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 RGS9O75916 674 aaPredicted RBP-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 IGKV2-30P06310 120 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 ADH4P08319 380 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 CCKARP32238 428 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 CD96P40200 585 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 THBS3P49746 956 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 MMP16P51512 607 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 FOXG1P55316 489 aaPredicted RBP-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 FOXK1P85037 733 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 CKAP4Q07065 602 aaKnown RBP-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 KCNC3Q14003 757 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 LSM12Q3MHD2 195 aaKnown RBP-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 OTUD3Q5T2D3 398 aaPredicted RBP-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 NT5DC1Q5TFE4 455 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 ZNF468Q5VIY5 522 aaPredicted RBP-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 TMEM132EQ6IEE7 984 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 Q6ZVU0 165 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 CYFIP1Q7L576 1253 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 FAM20CQ8IXL6 584 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 AGGF1Q8N302 714 aaeCLIP-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 DTWD1Q8N5C7 304 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 FAM174AQ8TBP5 190 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 LARP4BQ92615 738 aaKnown RBP-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 NELL1Q92832 810 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 ZNF503Q96F45 646 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 MISP3Q96FF7 219 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 CDCA7LQ96GN5 454 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 SIGLEC10Q96LC7 697 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 CDK15Q96Q40 435 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 WDR24Q96S15 920 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 TTPALQ9BTX7 342 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 SGPP1Q9BX95 441 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 C1QTNF7Q9BXJ2 289 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 CEP41Q9BYV8 373 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 MCOLN1Q9GZU1 580 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 GPAMQ9HCL2 828 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 PRDM7Q9NQW5 492 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 ZNF581Q9P0T4 197 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 KIAA1522Q9P206 1035 aaPredicted RBP-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 FAM198AQ9UFP1 575 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 ICKQ9UPZ9 632 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 TAF6LQ9Y6J9 622 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 DUSP10Q9Y6W6 482 aa-0.36□□□□□ -2.47
CDKL5-210ENST00000636046 TEX51A0A1B0GUA7 166 aa-0.37□□□□□ -2.47
CDKL5-210ENST00000636046 ADARB2-AS1A8MUL3 147 aa-0.37□□□□□ -2.47
CDKL5-210ENST00000636046 TNFRSF13BO14836 293 aaPredicted RBP-0.37□□□□□ -2.47
CDKL5-210ENST00000636046 MUSKO15146 869 aa-0.37□□□□□ -2.47
CDKL5-210ENST00000636046 ZBTB7BO15156 539 aaPredicted RBP-0.37□□□□□ -2.47
CDKL5-210ENST00000636046 PHF14O94880 888 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms