RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 LIN9Q5TKA1 542 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 GBP7Q8N8V2 638 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-209ENST00000635750 PANK2Q9BZ23 570 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 BIRC3Q13489 604 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 TPTE2Q6XPS3 522 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 SEPT14Q6ZU15 432 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 TAOK1Q7L7X3 1001 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 SDCCAG8Q86SQ7 713 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-209ENST00000635750 CCDC25Q86WR0 208 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 MIPOL1Q8TD10 442 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 FAM135AQ9P2D6 1515 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 ESYT2A0FGR8 921 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 KRT9P35527 623 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 ISM2Q6H9L7 571 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 VCXQ9H320 206 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 EXOC7Q9UPT5 735 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 ERICH3Q5RHP9 1530 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 PFDN6O15212 129 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 KRT86O43790 486 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 SNRPA1P09661 255 aaKnown RBP6.24□□□□□ -1.41
SCN1A-209ENST00000635750 TMPOP42166 694 aaKnown RBP6.24□□□□□ -1.41
SCN1A-209ENST00000635750 MNAT1P51948 309 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 CALCOCO2Q13137 446 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 FYB2Q5VWT5 728 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 STMN1P16949 149 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 KRT2P35908 639 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 PPP2R5CQ13362 524 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 KCNG4Q8TDN1 519 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 NBPF3Q9H094 633 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 PAXBP1Q9Y5B6 917 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 P4HA1P13674 534 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 HAND2P61296 217 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 ALDH1L2Q3SY69 923 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 CCDC121Q6ZUS5 278 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 ATRIPQ8WXE1 791 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 HAUS8Q9BT25 410 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 ANKRD2Q9GZV1 360 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 PRKAG2Q9UGJ0 569 aa6.24□□□□□ -1.41
SCN1A-209ENST00000635750 SSFA2P28290 1259 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 GNG11P61952 73 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 NCOA2Q15596 1464 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 SPDYE16A6NNV3 312 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-209ENST00000635750 SPDYE2Q495Y8 402 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 USHBP1Q8N6Y0 703 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 ZNF277Q9NRM2 450 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-209ENST00000635750 SAMD15Q9P1V8 674 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 FGD6Q6ZV73 1430 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 CETN3O15182 167 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 IVLP07476 585 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 GJB2P29033 226 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 ZNF449Q6P9G9 518 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 CCDC26Q8TAB7 109 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 AZI2Q9H6S1 392 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 FAM8A1Q9UBU6 413 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 PHF8Q9UPP1 1060 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 C9orf84Q5VXU9 1444 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 FOXO3O43524 673 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 SLC12A2P55011 1212 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 ALG1Q9BT22 464 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 IRAK4Q9NWZ3 460 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 RAB3GAP1Q15042 981 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 DTHD1Q6ZMT9 781 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 TMEM57Q8N5G2 664 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 C16orf45Q96MC5 204 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-209ENST00000635750 NKIRAS1Q9NYS0 192 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 NIP7Q9Y221 180 aaKnown RBP eCLIP6.23□□□□□ -1.41
SCN1A-209ENST00000635750 NSD3Q9BZ95 1437 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 TTC21BQ7Z4L5 1316 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 CTAGE15A4D2H0 777 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 GOLGA8CPA6NN73 597 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 LDHBP07195 334 aaKnown RBP6.23□□□□□ -1.41
SCN1A-209ENST00000635750 CTAGE8P0CG41 777 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 HARSP12081 509 aaKnown RBP6.23□□□□□ -1.41
SCN1A-209ENST00000635750 DCAF17Q5H9S7 520 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-209ENST00000635750 INTS8Q75QN2 995 aaKnown RBP6.23□□□□□ -1.41
SCN1A-209ENST00000635750 CPLX4Q7Z7G2 160 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 CTAGE6Q86UF2 777 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 CTAGE4Q8IX94 777 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 FAM193BQ96PV7 902 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-209ENST00000635750 STK32BQ9NY57 414 aa6.23□□□□□ -1.41
SCN1A-209ENST00000635750 CCDC169A6NNP5 214 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 ATP11AP98196 1134 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 CEP85LQ5SZL2 805 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 UBE3BQ7Z3V4 1068 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 ACSBG1Q96GR2 724 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 SMARCA4P51532 1647 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 ATP2A3Q93084 1043 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 ARFGAP3Q9NP61 516 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 PPME1Q9Y570 386 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 CCDC171Q6TFL3 1326 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 PALM3A6NDB9 673 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 PTGS1P23219 599 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 CDR2Q01850 454 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 DIXDC1Q155Q3 683 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 LGSNQ5TDP6 509 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 LEO1Q8WVC0 666 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 RBM28Q9NW13 759 aaKnown RBP6.22□□□□□ -1.41
SCN1A-209ENST00000635750 GINS2Q9Y248 185 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 CCDC141Q6ZP82 1450 aa6.22□□□□□ -1.41
SCN1A-209ENST00000635750 CALUO43852 315 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms