RNA–Protein interactions for RNA: ENST00000633109.1

LINC01002-221, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 3

Gene LINC01002, Length 523 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-221ENST00000633109 RNF123Q5XPI4 1314 aa4.92□□□□□ -1.62
LINC01002-221ENST00000633109 CDHR2Q9BYE9 1310 aa4.92□□□□□ -1.62
LINC01002-221ENST00000633109 WDR33Q9C0J8 1336 aaKnown RBP4.92□□□□□ -1.62
LINC01002-221ENST00000633109 CCDC88AQ3V6T2 1871 aa4.92□□□□□ -1.62
LINC01002-221ENST00000633109 NPC1L1Q9UHC9 1359 aa4.91□□□□□ -1.62
LINC01002-221ENST00000633109 ZMYND10O75800 440 aa4.91□□□□□ -1.62
LINC01002-221ENST00000633109 CANXP27824 592 aaKnown RBP4.91□□□□□ -1.62
LINC01002-221ENST00000633109 MAP2K2P36507 400 aa4.91□□□□□ -1.62
LINC01002-221ENST00000633109 MARSP56192 900 aaKnown RBP4.91□□□□□ -1.62
LINC01002-221ENST00000633109 MLLT1Q03111 559 aaPredicted RBP4.91□□□□□ -1.62
LINC01002-221ENST00000633109 MTHFSDQ2M296 383 aaKnown RBP4.91□□□□□ -1.62
LINC01002-221ENST00000633109 MORC1Q86VD1 984 aa4.91□□□□□ -1.62
LINC01002-221ENST00000633109 RTKN2Q8IZC4 609 aa4.91□□□□□ -1.62
LINC01002-221ENST00000633109 TTC5Q8N0Z6 440 aa4.91□□□□□ -1.62
LINC01002-221ENST00000633109 CNTROBQ8N137 903 aa4.91□□□□□ -1.62
LINC01002-221ENST00000633109 CNTNAP3BQ96NU0 1288 aa4.91□□□□□ -1.62
LINC01002-221ENST00000633109 CNTNAP3Q9BZ76 1288 aa4.91□□□□□ -1.62
LINC01002-221ENST00000633109 PANK3Q9H999 370 aa4.91□□□□□ -1.62
LINC01002-221ENST00000633109 DDX21Q9NR30 783 aaKnown RBP eCLIP4.91□□□□□ -1.62
LINC01002-221ENST00000633109 ZNF277Q9NRM2 450 aaPredicted RBP4.91□□□□□ -1.62
LINC01002-221ENST00000633109 KIF7Q2M1P5 1343 aa4.91□□□□□ -1.62
LINC01002-221ENST00000633109 LAMB4A4D0S4 1761 aa4.91□□□□□ -1.62
LINC01002-221ENST00000633109 DXOO77932 396 aaKnown RBP4.9□□□□□ -1.63
LINC01002-221ENST00000633109 IARSP41252 1262 aaKnown RBP4.9□□□□□ -1.63
LINC01002-221ENST00000633109 ECE1P42892 770 aa4.9□□□□□ -1.63
LINC01002-221ENST00000633109 SCNN1DP51172 638 aa4.9□□□□□ -1.63
LINC01002-221ENST00000633109 BRPF1P55201 1214 aaPredicted RBP4.9□□□□□ -1.63
LINC01002-221ENST00000633109 DEFB115Q30KQ5 88 aa4.9□□□□□ -1.63
LINC01002-221ENST00000633109 MAP1SQ66K74 1059 aaPredicted RBP4.9□□□□□ -1.63
LINC01002-221ENST00000633109 CC2D2BQ6DHV5 1058 aa4.9□□□□□ -1.63
LINC01002-221ENST00000633109 KANK3Q6NY19 840 aa4.9□□□□□ -1.63
LINC01002-221ENST00000633109 BICDL1Q6ZP65 573 aa4.9□□□□□ -1.63
LINC01002-221ENST00000633109 PSMG3-AS1Q96PY0 264 aa4.9□□□□□ -1.63
LINC01002-221ENST00000633109 FMNL2Q96PY5 1086 aa4.9□□□□□ -1.63
LINC01002-221ENST00000633109 USB1Q9BQ65 265 aaKnown RBP4.9□□□□□ -1.63
LINC01002-221ENST00000633109 ZNF652Q9Y2D9 606 aa4.9□□□□□ -1.63
LINC01002-221ENST00000633109 TLL2Q9Y6L7 1015 aa4.9□□□□□ -1.63
LINC01002-221ENST00000633109 CUL9Q8IWT3 2517 aa4.9□□□□□ -1.63
LINC01002-221ENST00000633109 ABCC12Q96J65 1359 aa4.9□□□□□ -1.63
LINC01002-221ENST00000633109 GNAT3A8MTJ3 354 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 ADAM23O75077 832 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 PPFIA3O75145 1194 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 ALDH1B1P30837 517 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 HOXA10P31260 410 aaPredicted RBP4.89□□□□□ -1.63
LINC01002-221ENST00000633109 TEFQ10587 303 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 EAPPQ56P03 285 aaPredicted RBP4.89□□□□□ -1.63
LINC01002-221ENST00000633109 CST9Q5W186 159 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 USP50Q70EL3 339 aaPredicted RBP4.89□□□□□ -1.63
LINC01002-221ENST00000633109 SAPCD2Q86UD0 394 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 NBPF5PQ86XG9 351 aaPredicted RBP4.89□□□□□ -1.63
LINC01002-221ENST00000633109 DZIP3Q86Y13 1208 aaKnown RBP4.89□□□□□ -1.63
LINC01002-221ENST00000633109 IL17REQ8NFR9 667 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 GAS2L2Q8NHY3 880 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 CAPNS2Q96L46 248 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 ABT1Q9ULW3 272 aaKnown RBP4.89□□□□□ -1.63
LINC01002-221ENST00000633109 TBC1D2BQ9UPU7 963 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 KNSTRNQ9Y448 316 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 CACNA1SQ13698 1873 aa4.89□□□□□ -1.63
LINC01002-221ENST00000633109 DUOX1Q9NRD9 1551 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 SIAH2O43255 324 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 DIAPH1O60610 1272 aaKnown RBP4.88□□□□□ -1.63
LINC01002-221ENST00000633109 A1BGP04217 495 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 HMOX1P09601 288 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 CD46P15529 392 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 WDR4P57081 412 aaKnown RBP4.88□□□□□ -1.63
LINC01002-221ENST00000633109 USP46P62068 366 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 EIF4G2P78344 907 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC01002-221ENST00000633109 AMHR2Q16671 573 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 C6orf118Q5T5N4 469 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 OLFM4Q6UX06 510 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 TPTE2Q6XPS3 522 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 GALNT6Q8NCL4 622 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 CCDC102AQ96A19 550 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 GPR101Q96P66 508 aaPredicted RBP4.88□□□□□ -1.63
LINC01002-221ENST00000633109 BEGAINQ9BUH8 593 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 MCOLN1Q9GZU1 580 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 VPS33BQ9H267 617 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 SAGE1Q9NXZ1 904 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 PGAP2Q9UHJ9 254 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 LRRC37AA6NMS7 1700 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 ZNF609O15014 1411 aa4.88□□□□□ -1.63
LINC01002-221ENST00000633109 COL6A3P12111 3177 aa4.87□□□□□ -1.63
LINC01002-221ENST00000633109 MSTNO14793 375 aa4.87□□□□□ -1.63
LINC01002-221ENST00000633109 NPHP1O15259 732 aa4.87□□□□□ -1.63
LINC01002-221ENST00000633109 PER1O15534 1290 aaPredicted RBP4.87□□□□□ -1.63
LINC01002-221ENST00000633109 SNRPA1P09661 255 aaKnown RBP4.87□□□□□ -1.63
LINC01002-221ENST00000633109 HSPA5P11021 654 aaKnown RBP4.87□□□□□ -1.63
LINC01002-221ENST00000633109 LMOD1P29536 600 aaPredicted RBP4.87□□□□□ -1.63
LINC01002-221ENST00000633109 CLCN1P35523 988 aa4.87□□□□□ -1.63
LINC01002-221ENST00000633109 NNTQ13423 1086 aa4.87□□□□□ -1.63
LINC01002-221ENST00000633109 CYP4F22Q6NT55 531 aa4.87□□□□□ -1.63
LINC01002-221ENST00000633109 NBPF10Q6P3W6 841 aaKnown RBP4.87□□□□□ -1.63
LINC01002-221ENST00000633109 NPM2Q86SE8 214 aaKnown RBP4.87□□□□□ -1.63
LINC01002-221ENST00000633109 SYNE4Q8N205 404 aa4.87□□□□□ -1.63
LINC01002-221ENST00000633109 NBPF15Q8N660 670 aa4.87□□□□□ -1.63
LINC01002-221ENST00000633109 ZC3H15Q8WU90 426 aaKnown RBP4.87□□□□□ -1.63
LINC01002-221ENST00000633109 JDP2Q8WYK2 163 aa4.87□□□□□ -1.63
LINC01002-221ENST00000633109 SCARF2Q96GP6 870 aaPredicted RBP4.87□□□□□ -1.63
LINC01002-221ENST00000633109 RTFDC1Q9BY42 306 aaPredicted RBP4.87□□□□□ -1.63
LINC01002-221ENST00000633109 NYXQ9GZU5 481 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms