RNA–Protein interactions for RNA: ENST00000629913.2

TREX1-206, Transcript of three prime repair exonuclease 1, humanhuman

APPRIS P1 BASIC

Gene TREX1, Length 945 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-206ENST00000629913 KIF16BQ96L93 1317 aa17.17■□□□□ 0.34
TREX1-206ENST00000629913 GYG1P46976 350 aa17.16■□□□□ 0.34
TREX1-206ENST00000629913 LBX1P52954 281 aa17.16■□□□□ 0.34
TREX1-206ENST00000629913 NOGQ13253 232 aa17.16■□□□□ 0.34
TREX1-206ENST00000629913 METTL24Q5JXM2 366 aa17.16■□□□□ 0.34
TREX1-206ENST00000629913 RGMBQ6NW40 437 aa17.16■□□□□ 0.34
TREX1-206ENST00000629913 TDRD7Q8NHU6 1098 aaKnown RBP17.16■□□□□ 0.34
TREX1-206ENST00000629913 FAM84BQ96KN1 310 aaPredicted RBP17.16■□□□□ 0.34
TREX1-206ENST00000629913 JAG2Q9Y219 1238 aa17.16■□□□□ 0.34
TREX1-206ENST00000629913 FAM205AQ6ZU69 1335 aa17.16■□□□□ 0.34
TREX1-206ENST00000629913 FAM155AB1AL88 458 aaPredicted RBP17.15■□□□□ 0.34
TREX1-206ENST00000629913 UBTFL1P0CB47 393 aaPredicted RBP17.15■□□□□ 0.34
TREX1-206ENST00000629913 HIBADHP31937 336 aaKnown RBP17.15■□□□□ 0.34
TREX1-206ENST00000629913 RFX5P48382 616 aaPredicted RBP17.15■□□□□ 0.34
TREX1-206ENST00000629913 FKBP1BP68106 108 aa17.15■□□□□ 0.34
TREX1-206ENST00000629913 MTMR14Q8NCE2 650 aa17.15■□□□□ 0.34
TREX1-206ENST00000629913 ARHGAP45Q92619 1136 aa17.15■□□□□ 0.34
TREX1-206ENST00000629913 BEGAINQ9BUH8 593 aa17.15■□□□□ 0.34
TREX1-206ENST00000629913 ARAP2Q8WZ64 1704 aa17.15■□□□□ 0.34
TREX1-206ENST00000629913 PDE8BO95263 885 aa17.14■□□□□ 0.33
TREX1-206ENST00000629913 APOBEC3FQ8IUX4 373 aaKnown RBP17.14■□□□□ 0.33
TREX1-206ENST00000629913 ZIC5Q96T25 663 aa17.14■□□□□ 0.33
TREX1-206ENST00000629913 F8W031 263 aaPredicted RBP17.13■□□□□ 0.33
TREX1-206ENST00000629913 PTPN12Q05209 780 aaKnown RBP17.13■□□□□ 0.33
TREX1-206ENST00000629913 DLGAP5Q15398 846 aa17.13■□□□□ 0.33
TREX1-206ENST00000629913 PRAMEF18Q5VWM3 479 aa17.13■□□□□ 0.33
TREX1-206ENST00000629913 FBXO33Q7Z6M2 555 aa17.13■□□□□ 0.33
TREX1-206ENST00000629913 CCDC102AQ96A19 550 aa17.13■□□□□ 0.33
TREX1-206ENST00000629913 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
TREX1-206ENST00000629913 EYA2O00167 538 aa17.12■□□□□ 0.33
TREX1-206ENST00000629913 CA12O43570 354 aa17.12■□□□□ 0.33
TREX1-206ENST00000629913 SLC10A3P09131 477 aa17.12■□□□□ 0.33
TREX1-206ENST00000629913 ZNF157P51786 506 aaPredicted RBP17.12■□□□□ 0.33
TREX1-206ENST00000629913 PUM3Q15397 648 aaKnown RBP17.12■□□□□ 0.33
TREX1-206ENST00000629913 MFSD14BQ5SR56 506 aa17.12■□□□□ 0.33
TREX1-206ENST00000629913 INTS3Q68E01 1043 aaKnown RBP17.12■□□□□ 0.33
TREX1-206ENST00000629913 MEIS3Q99687 375 aa17.12■□□□□ 0.33
TREX1-206ENST00000629913 PCDHAC2Q9Y5I4 1007 aa17.12■□□□□ 0.33
TREX1-206ENST00000629913 ECM29Q5VYK3 1845 aa17.12■□□□□ 0.33
TREX1-206ENST00000629913 SPDYE2BA6NHP3 402 aa17.11■□□□□ 0.33
TREX1-206ENST00000629913 SPDYE6P0CI01 402 aa17.11■□□□□ 0.33
TREX1-206ENST00000629913 FGFR2P21802 821 aa17.11■□□□□ 0.33
TREX1-206ENST00000629913 HNRNPUQ00839 825 aaKnown RBP eCLIP17.11■□□□□ 0.33
TREX1-206ENST00000629913 CFAP100Q494V2 611 aa17.11■□□□□ 0.33
TREX1-206ENST00000629913 VPS37DQ86XT2 251 aa17.11■□□□□ 0.33
TREX1-206ENST00000629913 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
TREX1-206ENST00000629913 TRIM27P14373 513 aa17.1■□□□□ 0.33
TREX1-206ENST00000629913 CAVIN4Q5BKX8 364 aa17.1■□□□□ 0.33
TREX1-206ENST00000629913 MOB2Q70IA6 237 aa17.1■□□□□ 0.33
TREX1-206ENST00000629913 ATG9AQ7Z3C6 839 aa17.1■□□□□ 0.33
TREX1-206ENST00000629913 RASAL3Q86YV0 1011 aa17.1■□□□□ 0.33
TREX1-206ENST00000629913 TSKSQ9UJT2 592 aa17.1■□□□□ 0.33
TREX1-206ENST00000629913 FBXO3Q9UK99 471 aa17.1■□□□□ 0.33
TREX1-206ENST00000629913 HDAC5Q9UQL6 1122 aa17.1■□□□□ 0.33
TREX1-206ENST00000629913 MYO1BO43795 1136 aa17.09■□□□□ 0.33
TREX1-206ENST00000629913 BCAR3O75815 825 aa17.09■□□□□ 0.33
TREX1-206ENST00000629913 CIAO1O76071 339 aa17.09■□□□□ 0.33
TREX1-206ENST00000629913 NF2P35240 595 aa17.09■□□□□ 0.33
TREX1-206ENST00000629913 PRMT6Q96LA8 375 aaPredicted RBP17.09■□□□□ 0.33
TREX1-206ENST00000629913 TTF2Q9UNY4 1162 aaKnown RBP17.09■□□□□ 0.33
TREX1-206ENST00000629913 IQSEC3Q9UPP2 1182 aaPredicted RBP17.09■□□□□ 0.33
TREX1-206ENST00000629913 AOX1Q06278 1338 aa17.09■□□□□ 0.33
TREX1-206ENST00000629913 CLRN2A0PK11 232 aa17.08■□□□□ 0.32
TREX1-206ENST00000629913 IPO8O15397 1037 aaKnown RBP17.08■□□□□ 0.32
TREX1-206ENST00000629913 IFIT1P09914 478 aaKnown RBP17.08■□□□□ 0.32
TREX1-206ENST00000629913 BCAMP50895 628 aa17.08■□□□□ 0.32
TREX1-206ENST00000629913 KIF23Q02241 960 aaPredicted RBP17.08■□□□□ 0.32
TREX1-206ENST00000629913 ATF7IPQ6VMQ6 1270 aa17.08■□□□□ 0.32
TREX1-206ENST00000629913 LPIN2Q92539 896 aa17.08■□□□□ 0.32
TREX1-206ENST00000629913 SIL1Q9H173 461 aa17.08■□□□□ 0.32
TREX1-206ENST00000629913 DEFB129Q9H1M3 183 aa17.08■□□□□ 0.32
TREX1-206ENST00000629913 SERPINA10Q9UK55 444 aa17.08■□□□□ 0.32
TREX1-206ENST00000629913 PPP2R3BQ9Y5P8 575 aa17.08■□□□□ 0.32
TREX1-206ENST00000629913 SSC5DA1L4H1 1573 aa17.07■□□□□ 0.32
TREX1-206ENST00000629913 UBE2Q2LH0YL09 131 aa17.07■□□□□ 0.32
TREX1-206ENST00000629913 GNAI3P08754 354 aa17.07■□□□□ 0.32
TREX1-206ENST00000629913 SLC5A1P13866 664 aa17.07■□□□□ 0.32
TREX1-206ENST00000629913 RBM5P52756 815 aaKnown RBP eCLIP17.07■□□□□ 0.32
TREX1-206ENST00000629913 CHAF1AQ13111 956 aaPredicted RBP17.07■□□□□ 0.32
TREX1-206ENST00000629913 TTLL12Q14166 644 aaPredicted RBP17.07■□□□□ 0.32
TREX1-206ENST00000629913 TNNQ9UQP3 1299 aa17.07■□□□□ 0.32
TREX1-206ENST00000629913 FRAT2O75474 233 aaPredicted RBP17.06■□□□□ 0.32
TREX1-206ENST00000629913 GRIK5Q16478 980 aa17.06■□□□□ 0.32
TREX1-206ENST00000629913 TBC1D22AQ8WUA7 517 aa17.06■□□□□ 0.32
TREX1-206ENST00000629913 FRAT1Q92837 279 aaPredicted RBP17.06■□□□□ 0.32
TREX1-206ENST00000629913 COPRSQ9NQ92 184 aa17.06■□□□□ 0.32
TREX1-206ENST00000629913 CAPN15O75808 1086 aa17.05■□□□□ 0.32
TREX1-206ENST00000629913 IL15P40933 162 aaPredicted RBP17.05■□□□□ 0.32
TREX1-206ENST00000629913 CRKP46108 304 aa17.05■□□□□ 0.32
TREX1-206ENST00000629913 MTX1Q13505 466 aa17.05■□□□□ 0.32
TREX1-206ENST00000629913 SPDYE2Q495Y8 402 aa17.05■□□□□ 0.32
TREX1-206ENST00000629913 VEZTQ9HBM0 779 aa17.05■□□□□ 0.32
TREX1-206ENST00000629913 SAGE1Q9NXZ1 904 aa17.05■□□□□ 0.32
TREX1-206ENST00000629913 PA2G4Q9UQ80 394 aaKnown RBP17.05■□□□□ 0.32
TREX1-206ENST00000629913 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
TREX1-206ENST00000629913 HDLBPQ00341 1268 aaKnown RBP17.04■□□□□ 0.32
TREX1-206ENST00000629913 ATP2B3Q16720 1220 aa17.04■□□□□ 0.32
TREX1-206ENST00000629913 ARMC9Q7Z3E5 817 aa17.04■□□□□ 0.32
TREX1-206ENST00000629913 REM2Q8IYK8 340 aaPredicted RBP17.04■□□□□ 0.32
TREX1-206ENST00000629913 DZIP1LQ8IYY4 767 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms