RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 TMEM57Q8N5G2 664 aa6.99□□□□□ -1.29
LINC00550-202ENST00000629570 MEIS3Q99687 375 aa6.99□□□□□ -1.29
LINC00550-202ENST00000629570 TAOK3Q9H2K8 898 aa6.99□□□□□ -1.29
LINC00550-202ENST00000629570 BICC1Q9H694 974 aaKnown RBP6.99□□□□□ -1.29
LINC00550-202ENST00000629570 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.99□□□□□ -1.29
LINC00550-202ENST00000629570 PNMA3Q9UL41 463 aa6.99□□□□□ -1.29
LINC00550-202ENST00000629570 ATP6V0A2Q9Y487 856 aa6.99□□□□□ -1.29
LINC00550-202ENST00000629570 MYH3P11055 1940 aa6.99□□□□□ -1.29
LINC00550-202ENST00000629570 DUOX1Q9NRD9 1551 aa6.99□□□□□ -1.29
LINC00550-202ENST00000629570 CHD4Q14839 1912 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 COL4A5P29400 1685 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 PLIN1O60240 522 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 BBOX1O75936 387 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 CSF1RP07333 972 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 ITGA6P23229 1130 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 YY1P25490 414 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 RPS8P62241 208 aaKnown RBP6.98□□□□□ -1.29
LINC00550-202ENST00000629570 C9orf131Q5VYM1 1079 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 LMBR1LQ6UX01 489 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 FTSJ3Q8IY81 847 aaKnown RBP6.98□□□□□ -1.29
LINC00550-202ENST00000629570 ANKRD44Q8N8A2 993 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 PANK1Q8TE04 598 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 ZNF277Q9NRM2 450 aaPredicted RBP6.98□□□□□ -1.29
LINC00550-202ENST00000629570 RNF181Q9P0P0 153 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 CHMP3Q9Y3E7 222 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 LTBP3Q9NS15 1303 aa6.98□□□□□ -1.29
LINC00550-202ENST00000629570 UBTFL1P0CB47 393 aaPredicted RBP6.97□□□□□ -1.29
LINC00550-202ENST00000629570 LMNB1P20700 586 aa6.97□□□□□ -1.29
LINC00550-202ENST00000629570 OSBPP22059 807 aa6.97□□□□□ -1.29
LINC00550-202ENST00000629570 GPSM2P81274 684 aa6.97□□□□□ -1.29
LINC00550-202ENST00000629570 FKBP4Q02790 459 aaKnown RBP eCLIP6.97□□□□□ -1.29
LINC00550-202ENST00000629570 LTBP1Q14766 1721 aa6.97□□□□□ -1.29
LINC00550-202ENST00000629570 RABL6Q3YEC7 729 aaPredicted RBP6.97□□□□□ -1.29
LINC00550-202ENST00000629570 CC2D2BQ6DHV5 1058 aa6.97□□□□□ -1.29
LINC00550-202ENST00000629570 ANKRD18AQ8IVF6 992 aa6.97□□□□□ -1.29
LINC00550-202ENST00000629570 SP8Q8IXZ3 490 aa6.97□□□□□ -1.29
LINC00550-202ENST00000629570 DZIP1LQ8IYY4 767 aaKnown RBP6.97□□□□□ -1.29
LINC00550-202ENST00000629570 RTKN2Q8IZC4 609 aa6.97□□□□□ -1.29
LINC00550-202ENST00000629570 CDC5LQ99459 802 aaKnown RBP6.97□□□□□ -1.29
LINC00550-202ENST00000629570 PSMD1Q99460 953 aa6.97□□□□□ -1.29
LINC00550-202ENST00000629570 MTRQ99707 1265 aa6.97□□□□□ -1.29
LINC00550-202ENST00000629570 WDR70Q9NW82 654 aa6.97□□□□□ -1.29
LINC00550-202ENST00000629570 LRRFIP2Q9Y608 721 aaKnown RBP6.97□□□□□ -1.29
LINC00550-202ENST00000629570 SPEF2Q9C093 1822 aa6.97□□□□□ -1.29
LINC00550-202ENST00000629570 SBF1O95248 1867 aa6.96□□□□□ -1.29
LINC00550-202ENST00000629570 TIAM2Q8IVF5 1701 aa6.96□□□□□ -1.29
LINC00550-202ENST00000629570 ANKRD18BA2A2Z9 1011 aa6.96□□□□□ -1.3
LINC00550-202ENST00000629570 WTIPA6NIX2 430 aaPredicted RBP6.96□□□□□ -1.3
LINC00550-202ENST00000629570 IFIT5Q13325 482 aaKnown RBP6.96□□□□□ -1.3
LINC00550-202ENST00000629570 C20orf194Q5TEA3 1177 aa6.96□□□□□ -1.3
LINC00550-202ENST00000629570 DPP8Q6V1X1 898 aaPredicted RBP6.96□□□□□ -1.3
LINC00550-202ENST00000629570 NUDT18Q6ZVK8 323 aa6.96□□□□□ -1.3
LINC00550-202ENST00000629570 TMC4Q7Z404 712 aa6.96□□□□□ -1.3
LINC00550-202ENST00000629570 ITPRIPQ8IWB1 547 aa6.96□□□□□ -1.3
LINC00550-202ENST00000629570 MPNDQ8N594 471 aa6.96□□□□□ -1.3
LINC00550-202ENST00000629570 KLHDC4Q8TBB5 520 aa6.96□□□□□ -1.3
LINC00550-202ENST00000629570 ZNF594Q96JF6 807 aaPredicted RBP6.96□□□□□ -1.3
LINC00550-202ENST00000629570 GPR101Q96P66 508 aaPredicted RBP6.96□□□□□ -1.3
LINC00550-202ENST00000629570 TMX4Q9H1E5 349 aaPredicted RBP6.96□□□□□ -1.3
LINC00550-202ENST00000629570 BSDC1Q9NW68 430 aaPredicted RBP6.96□□□□□ -1.3
LINC00550-202ENST00000629570 NSFL1CQ9UNZ2 370 aaKnown RBP6.96□□□□□ -1.3
LINC00550-202ENST00000629570 RNF40O75150 1001 aa6.95□□□□□ -1.3
LINC00550-202ENST00000629570 UFL1O94874 794 aa6.95□□□□□ -1.3
LINC00550-202ENST00000629570 GNAI3P08754 354 aa6.95□□□□□ -1.3
LINC00550-202ENST00000629570 IGHMBP2P38935 993 aaKnown RBP6.95□□□□□ -1.3
LINC00550-202ENST00000629570 IARSP41252 1262 aaKnown RBP6.95□□□□□ -1.3
LINC00550-202ENST00000629570 AOC3Q16853 763 aa6.95□□□□□ -1.3
LINC00550-202ENST00000629570 CCDC57Q2TAC2 916 aa6.95□□□□□ -1.3
LINC00550-202ENST00000629570 PAXIP1Q6ZW49 1069 aaPredicted RBP6.95□□□□□ -1.3
LINC00550-202ENST00000629570 ZNF784Q8NCA9 323 aaPredicted RBP6.95□□□□□ -1.3
LINC00550-202ENST00000629570 ZNF526Q8TF50 670 aaPredicted RBP6.95□□□□□ -1.3
LINC00550-202ENST00000629570 MPHOSPH8Q99549 860 aa6.95□□□□□ -1.3
LINC00550-202ENST00000629570 RTFDC1Q9BY42 306 aaPredicted RBP6.95□□□□□ -1.3
LINC00550-202ENST00000629570 C1orf115Q9H7X2 142 aa6.95□□□□□ -1.3
LINC00550-202ENST00000629570 IL21Q9HBE4 155 aa6.95□□□□□ -1.3
LINC00550-202ENST00000629570 ANKIB1Q9P2G1 1089 aa6.95□□□□□ -1.3
LINC00550-202ENST00000629570 RBM27Q9P2N5 1060 aaKnown RBP6.95□□□□□ -1.3
LINC00550-202ENST00000629570 POLLQ9UGP5 575 aa6.95□□□□□ -1.3
LINC00550-202ENST00000629570 MINPP1Q9UNW1 487 aa6.95□□□□□ -1.3
LINC00550-202ENST00000629570 COG6Q9Y2V7 657 aa6.95□□□□□ -1.3
LINC00550-202ENST00000629570 C6orf229H3BNL8 230 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 PPIP5K2O43314 1243 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 KLRK1P26718 216 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 RFX5P48382 616 aaPredicted RBP6.94□□□□□ -1.3
LINC00550-202ENST00000629570 APLP1P51693 650 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 MVPQ14764 893 aaKnown RBP6.94□□□□□ -1.3
LINC00550-202ENST00000629570 LAPTM4AQ15012 233 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 GRIPAP1Q4V328 841 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 TAF7LQ5H9L4 462 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 LARGE2Q8N3Y3 721 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 TBC1D16Q8TBP0 767 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 PUS3Q9BZE2 481 aaKnown RBP6.94□□□□□ -1.3
LINC00550-202ENST00000629570 PRKD2Q9BZL6 878 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 PODXL2Q9NZ53 605 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 XDHP47989 1333 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 ZNF541Q9H0D2 1346 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 ZC3H4Q9UPT8 1303 aaKnown RBP6.94□□□□□ -1.3
LINC00550-202ENST00000629570 CCDC88AQ3V6T2 1871 aa6.94□□□□□ -1.3
LINC00550-202ENST00000629570 A0A1B0GUL6 1792 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 SNAP23O00161 211 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms