RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 PIH1D3Q9NQM4 214 aaKnown RBP8.8□□□□□ -1
PKP4-217ENST00000628904 AATFQ9NY61 560 aaKnown RBP eCLIP8.8□□□□□ -11e-7■■□□□ 14.3
PKP4-217ENST00000628904 SMIM22K7EJ46 135 aa8.8□□□□□ -1
PKP4-217ENST00000628904 CYP19A1P11511 503 aaPredicted RBP8.8□□□□□ -1
PKP4-217ENST00000628904 RFX5P48382 616 aaPredicted RBP8.8□□□□□ -1
PKP4-217ENST00000628904 MTX1Q13505 466 aa8.8□□□□□ -1
PKP4-217ENST00000628904 NCOA7Q8NI08 942 aa8.8□□□□□ -1
PKP4-217ENST00000628904 CTNNA3Q9UI47 895 aa8.8□□□□□ -1
PKP4-217ENST00000628904 DLG5Q8TDM6 1919 aa8.79□□□□□ -1
PKP4-217ENST00000628904 GOLGA8AA7E2F4 631 aa8.79□□□□□ -1
PKP4-217ENST00000628904 ADCY5O95622 1261 aa8.79□□□□□ -1
PKP4-217ENST00000628904 METAP2P50579 478 aaKnown RBP eCLIP8.79□□□□□ -19e-10■■□□□ 11.4
PKP4-217ENST00000628904 ITPK1Q13572 414 aa8.79□□□□□ -1
PKP4-217ENST00000628904 FSIP1Q8NA03 581 aa8.79□□□□□ -1
PKP4-217ENST00000628904 SLC12A7Q9Y666 1083 aa8.79□□□□□ -1
PKP4-217ENST00000628904 MCM5P33992 734 aa8.79□□□□□ -1
PKP4-217ENST00000628904 RBM5P52756 815 aaKnown RBP eCLIP8.79□□□□□ -1
PKP4-217ENST00000628904 TOB2Q14106 344 aaPredicted RBP8.79□□□□□ -1
PKP4-217ENST00000628904 LRSAM1Q6UWE0 723 aa8.79□□□□□ -1
PKP4-217ENST00000628904 NLRP3Q96P20 1036 aa8.79□□□□□ -1
PKP4-217ENST00000628904 NACAP1Q9BZK3 213 aa8.79□□□□□ -1
PKP4-217ENST00000628904 ZNF652Q9Y2D9 606 aa8.79□□□□□ -1
PKP4-217ENST00000628904 PIK3C2AO00443 1686 aa8.79□□□□□ -1
PKP4-217ENST00000628904 PDE8BO95263 885 aa8.79□□□□□ -1
PKP4-217ENST00000628904 DZIP1Q86YF9 867 aaKnown RBP8.79□□□□□ -1
PKP4-217ENST00000628904 CCAR1Q8IX12 1150 aaKnown RBP8.79□□□□□ -1
PKP4-217ENST00000628904 SAP30BPQ9UHR5 308 aaKnown RBP8.79□□□□□ -1
PKP4-217ENST00000628904 STX8Q9UNK0 236 aa8.79□□□□□ -1
PKP4-217ENST00000628904 KCNJ14Q9UNX9 436 aa8.79□□□□□ -1
PKP4-217ENST00000628904 PCCAP05165 728 aaPredicted RBP8.78□□□□□ -1
PKP4-217ENST00000628904 CYP2E1P05181 493 aaPredicted RBP8.78□□□□□ -1
PKP4-217ENST00000628904 UBE2HP62256 183 aa8.78□□□□□ -1
PKP4-217ENST00000628904 DYNLL1P63167 89 aaKnown RBP8.78□□□□□ -1
PKP4-217ENST00000628904 CHRNDQ07001 517 aa8.78□□□□□ -1
PKP4-217ENST00000628904 DHX8Q14562 1220 aaKnown RBP8.78□□□□□ -1
PKP4-217ENST00000628904 MAP3K11Q16584 847 aa8.78□□□□□ -1
PKP4-217ENST00000628904 FAM47AQ5JRC9 791 aa8.78□□□□□ -1
PKP4-217ENST00000628904 CCDC183Q5T5S1 534 aa8.78□□□□□ -1
PKP4-217ENST00000628904 MFSD6Q6ZSS7 791 aa8.78□□□□□ -1
PKP4-217ENST00000628904 SPATA5Q8NB90 893 aa8.78□□□□□ -1
PKP4-217ENST00000628904 CCDC192P0DO97 292 aa8.78□□□□□ -1
PKP4-217ENST00000628904 EIF6P56537 245 aaKnown RBP8.78□□□□□ -1
PKP4-217ENST00000628904 CCDC173Q0VFZ6 552 aa8.78□□□□□ -1
PKP4-217ENST00000628904 PICALMQ13492 652 aa8.78□□□□□ -1
PKP4-217ENST00000628904 RASGRF1Q13972 1273 aa8.78□□□□□ -1
PKP4-217ENST00000628904 INTS4Q96HW7 963 aaKnown RBP8.78□□□□□ -1
PKP4-217ENST00000628904 SENP2Q9HC62 589 aa8.78□□□□□ -1
PKP4-217ENST00000628904 GNL3LQ9NVN8 582 aaKnown RBP8.78□□□□□ -1
PKP4-217ENST00000628904 RTCBQ9Y3I0 505 aaKnown RBP8.78□□□□□ -1
PKP4-217ENST00000628904 NR1I2O75469 434 aa8.78□□□□□ -1
PKP4-217ENST00000628904 TRIM37O94972 964 aa8.78□□□□□ -1
PKP4-217ENST00000628904 SMC2O95347 1197 aa8.78□□□□□ -1
PKP4-217ENST00000628904 PDE6AP16499 860 aa8.78□□□□□ -1
PKP4-217ENST00000628904 USP5P45974 858 aa8.78□□□□□ -1
PKP4-217ENST00000628904 ANO6Q4KMQ2 910 aa8.78□□□□□ -1
PKP4-217ENST00000628904 HOMER1Q86YM7 354 aa8.78□□□□□ -1
PKP4-217ENST00000628904 CELF1Q92879 486 aaKnown RBP8.78□□□□□ -1
PKP4-217ENST00000628904 ALG1Q9BT22 464 aa8.78□□□□□ -1
PKP4-217ENST00000628904 KLHL10Q6JEL2 608 aa8.77□□□□□ -1.01
PKP4-217ENST00000628904 FAM177A1Q8N128 213 aaPredicted RBP8.77□□□□□ -1.01
PKP4-217ENST00000628904 TTC14Q96N46 770 aa8.77□□□□□ -1.01
PKP4-217ENST00000628904 CDC5LQ99459 802 aaKnown RBP8.77□□□□□ -1.01
PKP4-217ENST00000628904 HMG20BQ9P0W2 317 aa8.77□□□□□ -1.01
PKP4-217ENST00000628904 SART3Q15020 963 aaKnown RBP8.77□□□□□ -1.01
PKP4-217ENST00000628904 PUM3Q15397 648 aaKnown RBP8.77□□□□□ -1.01
PKP4-217ENST00000628904 TRMT1LQ7Z2T5 733 aaKnown RBP8.77□□□□□ -1.01
PKP4-217ENST00000628904 APPBP2Q92624 585 aa8.77□□□□□ -1.01
PKP4-217ENST00000628904 ZNF622Q969S3 477 aaKnown RBP eCLIP8.77□□□□□ -1.011e-7■□□□□ 10.3
PKP4-217ENST00000628904 TMX1Q9H3N1 280 aa8.77□□□□□ -1.01
PKP4-217ENST00000628904 AOX1Q06278 1338 aa8.77□□□□□ -1.01
PKP4-217ENST00000628904 SOS2Q07890 1332 aaPredicted RBP8.77□□□□□ -1.01
PKP4-217ENST00000628904 IARSP41252 1262 aaKnown RBP8.77□□□□□ -1.01
PKP4-217ENST00000628904 CUL4AQ13619 759 aa8.77□□□□□ -1.01
PKP4-217ENST00000628904 NAA16Q6N069 864 aaPredicted RBP8.77□□□□□ -1.01
PKP4-217ENST00000628904 ZSCAN25Q6NSZ9 544 aa8.77□□□□□ -1.01
PKP4-217ENST00000628904 FAM196AQ6ZSG2 479 aa8.77□□□□□ -1.01
PKP4-217ENST00000628904 TSC1Q92574 1164 aa8.77□□□□□ -1.01
PKP4-217ENST00000628904 USP28Q96RU2 1077 aa8.77□□□□□ -1.01
PKP4-217ENST00000628904 ERBB4Q15303 1308 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 UBN2Q6ZU65 1347 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 ZBTB22O15209 634 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 SAFBQ15424 915 aaKnown RBP eCLIP8.76□□□□□ -1.01
PKP4-217ENST00000628904 STAMQ92783 540 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 ZBTB43O43298 467 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 KLRK1P26718 216 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 ZSCAN29Q8IWY8 852 aaPredicted RBP8.76□□□□□ -1.01
PKP4-217ENST00000628904 LCORLQ8N3X6 602 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 PLIN2Q99541 437 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 REREQ9P2R6 1566 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 ZNF165P49910 485 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 TBC1D9BQ66K14 1250 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 C3orf67Q6ZVT6 689 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 RPGRQ92834 1020 aaKnown RBP8.76□□□□□ -1.01
PKP4-217ENST00000628904 GTF3C6Q969F1 213 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 NOL10Q9BSC4 688 aaKnown RBP8.76□□□□□ -1.01
PKP4-217ENST00000628904 MKNK2Q9HBH9 465 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 TRMT1Q9NXH9 659 aaKnown RBP8.76□□□□□ -1.01
PKP4-217ENST00000628904 MCM9Q9NXL9 1143 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 ZNF609O15014 1411 aa8.76□□□□□ -1.01
PKP4-217ENST00000628904 BAZ2BQ9UIF8 2168 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms