RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 APLP1P51693 650 aa23.39■■□□□ 1.33
CNOT9-209ENST00000627282 CHADLQ6NUI6 762 aa23.39■■□□□ 1.33
CNOT9-209ENST00000627282 LDHDQ86WU2 507 aa23.39■■□□□ 1.33
CNOT9-209ENST00000627282 CD209Q9NNX6 404 aa23.39■■□□□ 1.33
CNOT9-209ENST00000627282 HIBADHP31937 336 aaKnown RBP23.38■■□□□ 1.33
CNOT9-209ENST00000627282 ZNF804AQ7Z570 1209 aa23.38■■□□□ 1.33
CNOT9-209ENST00000627282 PNMA8AQ86V59 439 aaPredicted RBP23.38■■□□□ 1.33
CNOT9-209ENST00000627282 DBNDD2Q9BQY9 259 aa23.38■■□□□ 1.33
CNOT9-209ENST00000627282 TLR7Q9NYK1 1049 aaKnown RBP23.38■■□□□ 1.33
CNOT9-209ENST00000627282 DBNLQ9UJU6 430 aaKnown RBP23.38■■□□□ 1.33
CNOT9-209ENST00000627282 SCN9AQ15858 1988 aa23.38■■□□□ 1.33
CNOT9-209ENST00000627282 EAPPQ56P03 285 aaPredicted RBP23.37■■□□□ 1.33
CNOT9-209ENST00000627282 CAVIN4Q5BKX8 364 aa23.37■■□□□ 1.33
CNOT9-209ENST00000627282 AACSQ86V21 672 aa23.37■■□□□ 1.33
CNOT9-209ENST00000627282 CLASRPQ8N2M8 674 aaKnown RBP23.37■■□□□ 1.33
CNOT9-209ENST00000627282 CCDC8Q9H0W5 538 aaPredicted RBP23.37■■□□□ 1.33
CNOT9-209ENST00000627282 KCNQ5Q9NR82 932 aa23.37■■□□□ 1.33
CNOT9-209ENST00000627282 ADAMTSL1Q8N6G6 1762 aa23.37■■□□□ 1.33
CNOT9-209ENST00000627282 G3V3G9 751 aa23.37■■□□□ 1.33
CNOT9-209ENST00000627282 EPS15P42566 896 aa23.37■■□□□ 1.33
CNOT9-209ENST00000627282 PHKA1P46020 1223 aa23.37■■□□□ 1.33
CNOT9-209ENST00000627282 GMPSP49915 693 aaPredicted RBP23.37■■□□□ 1.33
CNOT9-209ENST00000627282 DCAF8Q5TAQ9 597 aa23.37■■□□□ 1.33
CNOT9-209ENST00000627282 PODNQ7Z5L7 613 aa23.37■■□□□ 1.33
CNOT9-209ENST00000627282 BCL11AQ9H165 835 aa23.37■■□□□ 1.33
CNOT9-209ENST00000627282 GPRC5DQ9NZD1 345 aa23.37■■□□□ 1.33
CNOT9-209ENST00000627282 IL1R1P14778 569 aa23.36■■□□□ 1.33
CNOT9-209ENST00000627282 CCDC102BQ68D86 513 aa23.35■■□□□ 1.33
CNOT9-209ENST00000627282 VPS37DQ86XT2 251 aa23.35■■□□□ 1.33
CNOT9-209ENST00000627282 TDRD7Q8NHU6 1098 aaKnown RBP23.35■■□□□ 1.33
CNOT9-209ENST00000627282 IQSEC3Q9UPP2 1182 aaPredicted RBP23.34■■□□□ 1.33
CNOT9-209ENST00000627282 PSMD14O00487 310 aa23.33■■□□□ 1.33
CNOT9-209ENST00000627282 GORABQ5T7V8 394 aa23.32■■□□□ 1.32
CNOT9-209ENST00000627282 USP50Q70EL3 339 aaPredicted RBP23.32■■□□□ 1.32
CNOT9-209ENST00000627282 ADARB2Q9NS39 739 aaKnown RBP23.32■■□□□ 1.32
CNOT9-209ENST00000627282 CLEC11AQ9Y240 323 aa23.32■■□□□ 1.32
CNOT9-209ENST00000627282 IFIT2P09913 472 aaKnown RBP23.31■■□□□ 1.32
CNOT9-209ENST00000627282 COL1A1P02452 1464 aaPredicted RBP23.31■■□□□ 1.32
CNOT9-209ENST00000627282 SEC24BO95487 1268 aa23.3■■□□□ 1.32
CNOT9-209ENST00000627282 DPF2Q92785 391 aa23.3■■□□□ 1.32
CNOT9-209ENST00000627282 JAG2Q9Y219 1238 aa23.3■■□□□ 1.32
CNOT9-209ENST00000627282 ZBTB12Q9Y330 459 aaPredicted RBP23.3■■□□□ 1.32
CNOT9-209ENST00000627282 PSME4Q14997 1843 aa23.3■■□□□ 1.32
CNOT9-209ENST00000627282 RPS12P25398 132 aaKnown RBP23.3■■□□□ 1.32
CNOT9-209ENST00000627282 GTF2IP78347 998 aa23.3■■□□□ 1.32
CNOT9-209ENST00000627282 RASGRF1Q13972 1273 aa23.3■■□□□ 1.32
CNOT9-209ENST00000627282 OTUD7AQ8TE49 926 aaPredicted RBP23.3■■□□□ 1.32
CNOT9-209ENST00000627282 DDRGK1Q96HY6 314 aa23.3■■□□□ 1.32
CNOT9-209ENST00000627282 ZNF646O15015 1829 aaPredicted RBP23.29■■□□□ 1.32
CNOT9-209ENST00000627282 USP17L3A6NCW0 530 aa23.29■■□□□ 1.32
CNOT9-209ENST00000627282 USP17L4A6NCW7 530 aa23.29■■□□□ 1.32
CNOT9-209ENST00000627282 ZBTB22O15209 634 aa23.29■■□□□ 1.32
CNOT9-209ENST00000627282 VIL1P09327 827 aaKnown RBP23.29■■□□□ 1.32
CNOT9-209ENST00000627282 ARID4AP29374 1257 aaPredicted RBP23.29■■□□□ 1.32
CNOT9-209ENST00000627282 BMP2KLQ5H9B9 411 aa23.29■■□□□ 1.32
CNOT9-209ENST00000627282 STRIP1Q5VSL9 837 aa23.29■■□□□ 1.32
CNOT9-209ENST00000627282 USP17L1Q7RTZ2 530 aa23.29■■□□□ 1.32
CNOT9-209ENST00000627282 GNL3LQ9NVN8 582 aaKnown RBP23.29■■□□□ 1.32
CNOT9-209ENST00000627282 ZBTB47Q9UFB7 747 aaPredicted RBP23.29■■□□□ 1.32
CNOT9-209ENST00000627282 CNOT7Q9UIV1 285 aaKnown RBP23.29■■□□□ 1.32
CNOT9-209ENST00000627282 FAM205AQ6ZU69 1335 aa23.28■■□□□ 1.32
CNOT9-209ENST00000627282 HTRA3P83110 453 aa23.28■■□□□ 1.32
CNOT9-209ENST00000627282 SCARF1Q14162 830 aa23.28■■□□□ 1.32
CNOT9-209ENST00000627282 CCDC158Q5M9N0 1113 aa23.28■■□□□ 1.32
CNOT9-209ENST00000627282 DACT2Q5SW24 774 aa23.28■■□□□ 1.32
CNOT9-209ENST00000627282 TTLL5Q6EMB2 1281 aa23.28■■□□□ 1.32
CNOT9-209ENST00000627282 PASKQ96RG2 1323 aa23.28■■□□□ 1.32
CNOT9-209ENST00000627282 FRAT2O75474 233 aaPredicted RBP23.27■■□□□ 1.32
CNOT9-209ENST00000627282 ITGBL1O95965 494 aaPredicted RBP23.27■■□□□ 1.32
CNOT9-209ENST00000627282 TTC39AQ5SRH9 613 aa23.27■■□□□ 1.32
CNOT9-209ENST00000627282 MAP1SQ66K74 1059 aaPredicted RBP23.27■■□□□ 1.32
CNOT9-209ENST00000627282 MICALL2Q8IY33 904 aa23.27■■□□□ 1.32
CNOT9-209ENST00000627282 FBXW7Q969H0 707 aa23.27■■□□□ 1.32
CNOT9-209ENST00000627282 ZNF512BQ96KM6 892 aaPredicted RBP23.27■■□□□ 1.32
CNOT9-209ENST00000627282 MXD3Q9BW11 206 aa23.27■■□□□ 1.32
CNOT9-209ENST00000627282 SHTN1A0MZ66 631 aa23.26■■□□□ 1.31
CNOT9-209ENST00000627282 SEMA3EO15041 775 aa23.26■■□□□ 1.31
CNOT9-209ENST00000627282 MCAMP43121 646 aa23.26■■□□□ 1.31
CNOT9-209ENST00000627282 CHAF1AQ13111 956 aaPredicted RBP23.26■■□□□ 1.31
CNOT9-209ENST00000627282 PI16Q6UXB8 463 aa23.26■■□□□ 1.31
CNOT9-209ENST00000627282 SALL3Q9BXA9 1300 aa23.26■■□□□ 1.31
CNOT9-209ENST00000627282 H7C1D1 291 aa23.26■■□□□ 1.31
CNOT9-209ENST00000627282 UQCRFS1P1P0C7P4 283 aa23.26■■□□□ 1.31
CNOT9-209ENST00000627282 PLEKHM2Q8IWE5 1019 aa23.26■■□□□ 1.31
CNOT9-209ENST00000627282 CNTROBQ8N137 903 aa23.26■■□□□ 1.31
CNOT9-209ENST00000627282 DNAJC5GQ8N7S2 189 aa23.26■■□□□ 1.31
CNOT9-209ENST00000627282 HMG20BQ9P0W2 317 aa23.26■■□□□ 1.31
CNOT9-209ENST00000627282 MYH13Q9UKX3 1938 aa23.25■■□□□ 1.31
CNOT9-209ENST00000627282 RSBN1LQ6PCB5 846 aaPredicted RBP23.25■■□□□ 1.31
CNOT9-209ENST00000627282 CERS5Q8N5B7 392 aa23.25■■□□□ 1.31
CNOT9-209ENST00000627282 DENND2AQ9ULE3 1009 aa23.25■■□□□ 1.31
CNOT9-209ENST00000627282 AKAP11Q9UKA4 1901 aa23.25■■□□□ 1.31
CNOT9-209ENST00000627282 TRPM4Q8TD43 1214 aa23.24■■□□□ 1.31
CNOT9-209ENST00000627282 HIRAP54198 1017 aaPredicted RBP23.23■■□□□ 1.31
CNOT9-209ENST00000627282 TSHZ3Q63HK5 1081 aa23.23■■□□□ 1.31
CNOT9-209ENST00000627282 AGBL3Q8NEM8 1001 aa23.23■■□□□ 1.31
CNOT9-209ENST00000627282 GMLQ99445 158 aa23.23■■□□□ 1.31
CNOT9-209ENST00000627282 UPF2Q9HAU5 1272 aaKnown RBP23.23■■□□□ 1.31
CNOT9-209ENST00000627282 PDS5AQ29RF7 1337 aaKnown RBP23.23■■□□□ 1.31
CNOT9-209ENST00000627282 MFSD14BQ5SR56 506 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms