RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 MTX1Q13505 466 aa11.87□□□□□ -0.51
LINC01560-202ENST00000624822 CIAPIN1Q6FI81 312 aa11.87□□□□□ -0.51
LINC01560-202ENST00000624822 C16orf71Q8IYS4 520 aaPredicted RBP11.87□□□□□ -0.51
LINC01560-202ENST00000624822 FBXW7Q969H0 707 aa11.87□□□□□ -0.51
LINC01560-202ENST00000624822 NMRK2Q9NPI5 230 aa11.87□□□□□ -0.51
LINC01560-202ENST00000624822 RIPOR2Q9Y4F9 1068 aa11.87□□□□□ -0.51
LINC01560-202ENST00000624822 ZNF646O15015 1829 aaPredicted RBP11.86□□□□□ -0.51
LINC01560-202ENST00000624822 SNPHO15079 494 aa11.86□□□□□ -0.51
LINC01560-202ENST00000624822 KLRK1P26718 216 aa11.86□□□□□ -0.51
LINC01560-202ENST00000624822 GPC2Q8N158 579 aa11.86□□□□□ -0.51
LINC01560-202ENST00000624822 YDJCA8MPS7 323 aa11.85□□□□□ -0.51
LINC01560-202ENST00000624822 CIAO1O76071 339 aa11.85□□□□□ -0.51
LINC01560-202ENST00000624822 PDE8BO95263 885 aa11.85□□□□□ -0.51
LINC01560-202ENST00000624822 LMOD1P29536 600 aaPredicted RBP11.85□□□□□ -0.51
LINC01560-202ENST00000624822 IL15P40933 162 aaPredicted RBP11.85□□□□□ -0.51
LINC01560-202ENST00000624822 ATP8B2P98198 1209 aa11.85□□□□□ -0.51
LINC01560-202ENST00000624822 CXCL9Q07325 125 aa11.85□□□□□ -0.51
LINC01560-202ENST00000624822 G3BP1Q13283 466 aaKnown RBP eCLIP11.85□□□□□ -0.51
LINC01560-202ENST00000624822 OS9Q13438 667 aaPredicted RBP11.85□□□□□ -0.51
LINC01560-202ENST00000624822 UBE4AQ14139 1066 aa11.85□□□□□ -0.51
LINC01560-202ENST00000624822 TNIP1Q15025 636 aa11.85□□□□□ -0.51
LINC01560-202ENST00000624822 ZNF804AQ7Z570 1209 aa11.85□□□□□ -0.51
LINC01560-202ENST00000624822 TXNRD3Q86VQ6 643 aa11.85□□□□□ -0.51
LINC01560-202ENST00000624822 COPRSQ9NQ92 184 aa11.85□□□□□ -0.51
LINC01560-202ENST00000624822 CEP126Q9P2H0 1117 aa11.85□□□□□ -0.51
LINC01560-202ENST00000624822 IQCA1LA6NCM1 817 aa11.84□□□□□ -0.51
LINC01560-202ENST00000624822 PSMD14O00487 310 aa11.84□□□□□ -0.51
LINC01560-202ENST00000624822 VEGFAP15692 232 aaPredicted RBP11.84□□□□□ -0.51
LINC01560-202ENST00000624822 PUM3Q15397 648 aaKnown RBP11.84□□□□□ -0.51
LINC01560-202ENST00000624822 CEP85Q6P2H3 762 aa11.84□□□□□ -0.51
LINC01560-202ENST00000624822 ATG9AQ7Z3C6 839 aa11.84□□□□□ -0.51
LINC01560-202ENST00000624822 PODNQ7Z5L7 613 aa11.84□□□□□ -0.51
LINC01560-202ENST00000624822 VPS37DQ86XT2 251 aa11.84□□□□□ -0.51
LINC01560-202ENST00000624822 COA1Q9GZY4 146 aa11.84□□□□□ -0.51
LINC01560-202ENST00000624822 KCNQ5Q9NR82 932 aa11.84□□□□□ -0.51
LINC01560-202ENST00000624822 SUPT16HQ9Y5B9 1047 aaKnown RBP11.84□□□□□ -0.51
LINC01560-202ENST00000624822 SURF6O75683 361 aaKnown RBP11.83□□□□□ -0.52
LINC01560-202ENST00000624822 IFIT1P09914 478 aaKnown RBP11.83□□□□□ -0.52
LINC01560-202ENST00000624822 SLC5A1P13866 664 aa11.83□□□□□ -0.52
LINC01560-202ENST00000624822 CAVIN4Q5BKX8 364 aa11.83□□□□□ -0.52
LINC01560-202ENST00000624822 VGLL2Q8N8G2 317 aa11.83□□□□□ -0.52
LINC01560-202ENST00000624822 SSH3Q8TE77 659 aa11.83□□□□□ -0.52
LINC01560-202ENST00000624822 TMEM121BQ9BXQ6 578 aaPredicted RBP11.83□□□□□ -0.52
LINC01560-202ENST00000624822 ZBTB40Q9NUA8 1239 aa11.83□□□□□ -0.52
LINC01560-202ENST00000624822 HACL1Q9UJ83 578 aa11.83□□□□□ -0.52
LINC01560-202ENST00000624822 KIF3CO14782 793 aa11.82□□□□□ -0.52
LINC01560-202ENST00000624822 HMMRO75330 724 aa11.82□□□□□ -0.52
LINC01560-202ENST00000624822 FRAT2O75474 233 aaPredicted RBP11.82□□□□□ -0.52
LINC01560-202ENST00000624822 GYG1P46976 350 aa11.82□□□□□ -0.52
LINC01560-202ENST00000624822 GMPSP49915 693 aaPredicted RBP11.82□□□□□ -0.52
LINC01560-202ENST00000624822 TFCP2Q12800 502 aa11.82□□□□□ -0.52
LINC01560-202ENST00000624822 ATP2B3Q16720 1220 aa11.82□□□□□ -0.52
LINC01560-202ENST00000624822 EAPPQ56P03 285 aaPredicted RBP11.82□□□□□ -0.52
LINC01560-202ENST00000624822 RPAP2Q8IXW5 612 aaPredicted RBP11.82□□□□□ -0.52
LINC01560-202ENST00000624822 CRBNQ96SW2 442 aa11.82□□□□□ -0.52
LINC01560-202ENST00000624822 USP17L3A6NCW0 530 aa11.81□□□□□ -0.52
LINC01560-202ENST00000624822 USP17L4A6NCW7 530 aa11.81□□□□□ -0.52
LINC01560-202ENST00000624822 HIBADHP31937 336 aaKnown RBP11.81□□□□□ -0.52
LINC01560-202ENST00000624822 SCNN1DP51172 638 aa11.81□□□□□ -0.52
LINC01560-202ENST00000624822 GTF2IP78347 998 aa11.81□□□□□ -0.52
LINC01560-202ENST00000624822 C15orf52Q6ZUT6 534 aaKnown RBP11.81□□□□□ -0.52
LINC01560-202ENST00000624822 USP17L1Q7RTZ2 530 aa11.81□□□□□ -0.52
LINC01560-202ENST00000624822 LPIN2Q92539 896 aa11.81□□□□□ -0.52
LINC01560-202ENST00000624822 CD209Q9NNX6 404 aa11.81□□□□□ -0.52
LINC01560-202ENST00000624822 AKAP2Q9Y2D5 859 aa11.81□□□□□ -0.52
LINC01560-202ENST00000624822 IRS2Q9Y4H2 1338 aa11.81□□□□□ -0.52
LINC01560-202ENST00000624822 POTECB2RU33 542 aa11.8□□□□□ -0.52
LINC01560-202ENST00000624822 EPHX2P34913 555 aa11.8□□□□□ -0.52
LINC01560-202ENST00000624822 TTLL5Q6EMB2 1281 aa11.8□□□□□ -0.52
LINC01560-202ENST00000624822 EFCAB3Q8N7B9 438 aa11.8□□□□□ -0.52
LINC01560-202ENST00000624822 FAM84BQ96KN1 310 aaPredicted RBP11.8□□□□□ -0.52
LINC01560-202ENST00000624822 NEUROD6Q96NK8 337 aa11.8□□□□□ -0.52
LINC01560-202ENST00000624822 BCL11AQ9H165 835 aa11.8□□□□□ -0.52
LINC01560-202ENST00000624822 IQSEC3Q9UPP2 1182 aaPredicted RBP11.8□□□□□ -0.52
LINC01560-202ENST00000624822 JAG2Q9Y219 1238 aa11.8□□□□□ -0.52
LINC01560-202ENST00000624822 EXOC6BQ9Y2D4 811 aa11.8□□□□□ -0.52
LINC01560-202ENST00000624822 ECM29Q5VYK3 1845 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 ZNF609O15014 1411 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 A0A1B0GUL7 405 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 H7C1D1 291 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 APBB1O00213 710 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 TOMM70O94826 608 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 VIL1P09327 827 aaKnown RBP11.79□□□□□ -0.52
LINC01560-202ENST00000624822 IL1R1P14778 569 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 FGFR2P21802 821 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 RPS12P25398 132 aaKnown RBP11.79□□□□□ -0.52
LINC01560-202ENST00000624822 EPS15P42566 896 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 BCAMP50895 628 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 GORABQ5T7V8 394 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 RSBN1LQ6PCB5 846 aaPredicted RBP11.79□□□□□ -0.52
LINC01560-202ENST00000624822 MICALL2Q8IY33 904 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 TAF1DQ9H5J8 278 aaPredicted RBP11.79□□□□□ -0.52
LINC01560-202ENST00000624822 GPRC5DQ9NZD1 345 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 CNOT7Q9UIV1 285 aaKnown RBP11.79□□□□□ -0.52
LINC01560-202ENST00000624822 BOLA1Q9Y3E2 137 aa11.79□□□□□ -0.52
LINC01560-202ENST00000624822 POLR2AP24928 1970 aaKnown RBP11.79□□□□□ -0.52
LINC01560-202ENST00000624822 ADAMTSL1Q8N6G6 1762 aa11.78□□□□□ -0.52
LINC01560-202ENST00000624822 SASH1O94885 1247 aa11.78□□□□□ -0.52
LINC01560-202ENST00000624822 TIMM10P62072 90 aa11.78□□□□□ -0.52
LINC01560-202ENST00000624822 CHAF1AQ13111 956 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms