RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 ZMYM1Q5SVZ6 1142 aa10.11□□□□□ -0.79
VCL-207ENST00000624354 ADALQ6DHV7 355 aa10.11□□□□□ -0.79
VCL-207ENST00000624354 LRP10Q7Z4F1 713 aa10.11□□□□□ -0.79
VCL-207ENST00000624354 FBXW7Q969H0 707 aa10.11□□□□□ -0.79
VCL-207ENST00000624354 ZBTB9Q96C00 473 aa10.11□□□□□ -0.79
VCL-207ENST00000624354 NLRP2Q9NX02 1062 aa10.11□□□□□ -0.79
VCL-207ENST00000624354 FMR1NBQ8N0W7 255 aaPredicted RBP10.1□□□□□ -0.79
VCL-207ENST00000624354 CCAR2Q8N163 923 aaKnown RBP10.1□□□□□ -0.79
VCL-207ENST00000624354 NOL10Q9BSC4 688 aaKnown RBP10.1□□□□□ -0.79
VCL-207ENST00000624354 STRN4Q9NRL3 753 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 RTEL1Q9NZ71 1219 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 PCDHA7Q9UN72 937 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 ADAMTS2O95450 1211 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 CSB-PGBD3P0DP91 1061 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 HNRNPH2P55795 449 aaKnown RBP10.1□□□□□ -0.79
VCL-207ENST00000624354 IFNL2Q8IZJ0 200 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 ERCC4Q92889 916 aaPredicted RBP10.1□□□□□ -0.79
VCL-207ENST00000624354 FMNL2Q96PY5 1086 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 IMPACTQ9P2X3 320 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 FEZ2Q9UHY8 353 aaPredicted RBP10.1□□□□□ -0.79
VCL-207ENST00000624354 ZNF215Q9UL58 517 aaPredicted RBP10.1□□□□□ -0.79
VCL-207ENST00000624354 SLIT3O75094 1523 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 CARMIL3Q8ND23 1372 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 A0A1W2PQ27 194 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 A0A1W2PQ64 194 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 A0A1W2PQD8 194 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 TIMM10P62072 90 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 STK38Q15208 465 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 SLFNL1Q499Z3 407 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 CHST3Q7LGC8 479 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 PLBD2Q8NHP8 589 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 ERO1AQ96HE7 468 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 ZFP91Q96JP5 570 aaPredicted RBP10.1□□□□□ -0.79
VCL-207ENST00000624354 GPR108Q9NPR9 543 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 FAM53CQ9NYF3 392 aa10.1□□□□□ -0.79
VCL-207ENST00000624354 KDM6AO15550 1401 aaPredicted RBP10.09□□□□□ -0.79
VCL-207ENST00000624354 A0A1B0GVL5 298 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 NRDCO43847 1150 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 TPM4P67936 248 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 ILDR1Q86SU0 546 aaPredicted RBP10.09□□□□□ -0.79
VCL-207ENST00000624354 KCNG4Q8TDN1 519 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 OSBPL5Q9H0X9 879 aaPredicted RBP10.09□□□□□ -0.79
VCL-207ENST00000624354 KCND1Q9NSA2 647 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 KIAA1468Q9P260 1216 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 TAOK2Q9UL54 1235 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 IFIT1P09914 478 aaKnown RBP10.09□□□□□ -0.79
VCL-207ENST00000624354 CYP2C19P33261 490 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 IL15P40933 162 aaPredicted RBP10.09□□□□□ -0.79
VCL-207ENST00000624354 CASP7P55210 303 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 TEX2Q8IWB9 1127 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 RNF113AO15541 343 aaKnown RBP10.09□□□□□ -0.79
VCL-207ENST00000624354 DHX16O60231 1041 aaKnown RBP10.09□□□□□ -0.79
VCL-207ENST00000624354 SMC2O95347 1197 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 LINC00301Q8NCQ3 95 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 ST7Q9NRC1 585 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.09□□□□□ -0.791e-6■□□□□ 11
VCL-207ENST00000624354 SLAIN2Q9P270 581 aa10.09□□□□□ -0.79
VCL-207ENST00000624354 MAST3O60307 1309 aa10.08□□□□□ -0.8
VCL-207ENST00000624354 SLU7O95391 586 aaKnown RBP10.08□□□□□ -0.8
VCL-207ENST00000624354 FDPSP14324 419 aaKnown RBP10.08□□□□□ -0.8
VCL-207ENST00000624354 NDUFA8P51970 172 aa10.08□□□□□ -0.8
VCL-207ENST00000624354 DHX8Q14562 1220 aaKnown RBP10.08□□□□□ -0.8
VCL-207ENST00000624354 LRRFIP1Q32MZ4 808 aaKnown RBP10.08□□□□□ -0.8
VCL-207ENST00000624354 ATG9AQ7Z3C6 839 aa10.08□□□□□ -0.8
VCL-207ENST00000624354 CCDC150Q8NCX0 1101 aa10.08□□□□□ -0.8
VCL-207ENST00000624354 RGS22Q8NE09 1264 aa10.08□□□□□ -0.8
VCL-207ENST00000624354 DCAF5Q96JK2 942 aa10.08□□□□□ -0.8
VCL-207ENST00000624354 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.08□□□□□ -0.8
VCL-207ENST00000624354 V9GYY5 206 aaPredicted RBP10.08□□□□□ -0.8
VCL-207ENST00000624354 SIPA1L3O60292 1781 aaPredicted RBP10.08□□□□□ -0.8
VCL-207ENST00000624354 A0A0G2JLW4 131 aa10.08□□□□□ -0.8
VCL-207ENST00000624354 YEATS4O95619 227 aa10.08□□□□□ -0.8
VCL-207ENST00000624354 POLR3DP05423 398 aaPredicted RBP10.08□□□□□ -0.8
VCL-207ENST00000624354 FOXO4P98177 505 aa10.08□□□□□ -0.8
VCL-207ENST00000624354 FBXO38Q6PIJ6 1188 aa10.08□□□□□ -0.8
VCL-207ENST00000624354 BPIFA3Q9BQP9 254 aa10.08□□□□□ -0.8
VCL-207ENST00000624354 H7C1W4 665 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 SPTLC2O15270 562 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 SFPQP23246 707 aaKnown RBP eCLIP10.07□□□□□ -0.8
VCL-207ENST00000624354 BMS1Q14692 1282 aaKnown RBP10.07□□□□□ -0.8
VCL-207ENST00000624354 DPCR1Q3MIW9 517 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 SYNE3Q6ZMZ3 975 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 NBPF11Q86T75 865 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 FBXL16Q8N461 479 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 EFCC1Q9HA90 598 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 POLR3EQ9NVU0 708 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 ADAMTS7Q9UKP4 1686 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 SLC3A2P08195 630 aaKnown RBP10.07□□□□□ -0.8
VCL-207ENST00000624354 EVCP57679 992 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 RAD51AP2Q09MP3 1159 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 IMMTQ16891 758 aaKnown RBP10.07□□□□□ -0.8
VCL-207ENST00000624354 TTLL5Q6EMB2 1281 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 OTUD7BQ6GQQ9 843 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 TMC6Q7Z403 805 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 BRAPQ7Z569 592 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 XPO4Q9C0E2 1151 aaKnown RBP10.07□□□□□ -0.8
VCL-207ENST00000624354 IFNKQ9P0W0 207 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 CLIC4Q9Y696 253 aa10.07□□□□□ -0.8
VCL-207ENST00000624354 ZNF142P52746 1687 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms