RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 ARID3CA6NKF2 412 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 TNFRSF21O75509 655 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 ACPPP15309 386 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 PREPP48147 710 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 GIMAP7Q8NHV1 300 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 NXPE3Q969Y0 559 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 ZKSCAN3Q9BRR0 538 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 SOX17Q9H6I2 414 aaPredicted RBP8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 A6NHS1 94 aa8.9□□□□□ -0.98
AC004943.3-201ENST00000624116 TMEM88BA6NKF7 163 aa8.9□□□□□ -0.98
AC004943.3-201ENST00000624116 IRAK1P51617 712 aa8.9□□□□□ -0.98
AC004943.3-201ENST00000624116 NUTM2GQ5VZR2 741 aa8.9□□□□□ -0.98
AC004943.3-201ENST00000624116 CYP4F12Q9HCS2 524 aa8.9□□□□□ -0.98
AC004943.3-201ENST00000624116 COL17A1Q9UMD9 1497 aaPredicted RBP8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 KRTAP9-6A0A140TA67 174 aa8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 PAX4O43316 350 aa8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 HHIPQ96QV1 700 aa8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 BHLHE41Q9C0J9 482 aaPredicted RBP8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 AMOTL2Q9Y2J4 779 aa8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 EREGO14944 169 aa8.88□□□□□ -0.99
AC004943.3-201ENST00000624116 GP2P55259 537 aaKnown RBP8.88□□□□□ -0.99
AC004943.3-201ENST00000624116 MTMR3Q13615 1198 aa8.88□□□□□ -0.99
AC004943.3-201ENST00000624116 CCDC82Q8N4S0 544 aa8.88□□□□□ -0.99
AC004943.3-201ENST00000624116 SUGCTQ9HAC7 445 aa8.88□□□□□ -0.99
AC004943.3-201ENST00000624116 TRPA1O75762 1119 aa8.87□□□□□ -0.99
AC004943.3-201ENST00000624116 MED26O95402 600 aa8.87□□□□□ -0.99
AC004943.3-201ENST00000624116 FKBP4Q02790 459 aaKnown RBP eCLIP8.87□□□□□ -0.99
AC004943.3-201ENST00000624116 VN1R5Q7Z5H4 357 aa8.87□□□□□ -0.99
AC004943.3-201ENST00000624116 ASAP3Q8TDY4 903 aa8.87□□□□□ -0.99
AC004943.3-201ENST00000624116 USP26Q9BXU7 913 aa8.87□□□□□ -0.99
AC004943.3-201ENST00000624116 SOX1O00570 391 aaPredicted RBP8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 SPINK2P20155 84 aa8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 CPSF6Q16630 551 aaKnown RBP eCLIP8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 DTX1Q86Y01 620 aa8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 SMG8Q8ND04 991 aaKnown RBP8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 SHKBP1Q8TBC3 707 aa8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 TMPRSS13Q9BYE2 586 aa8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 PRR19A6NJB7 356 aa8.85□□□□□ -0.99
AC004943.3-201ENST00000624116 MAP4P27816 1152 aaKnown RBP8.85□□□□□ -0.99
AC004943.3-201ENST00000624116 B4GALNT3Q6L9W6 998 aa8.85□□□□□ -0.99
AC004943.3-201ENST00000624116 GJD3Q8N144 294 aa8.85□□□□□ -0.99
AC004943.3-201ENST00000624116 C12orf50Q8NA57 414 aaPredicted RBP8.85□□□□□ -0.99
AC004943.3-201ENST00000624116 LOC100289279A0A1B0GTE1 492 aa8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 WNT11O96014 354 aa8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 RXRBP28702 533 aa8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 HP1BP3Q5SSJ5 553 aaPredicted RBP8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 YIPF2Q9BWQ6 316 aa8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 ATG3Q9NT62 314 aa8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 FOXD3Q9UJU5 478 aaPredicted RBP8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 FZD6O60353 706 aa8.83□□□□□ -1
AC004943.3-201ENST00000624116 ABL1P00519 1130 aa8.83□□□□□ -1
AC004943.3-201ENST00000624116 ESRRAP11474 423 aaPredicted RBP8.83□□□□□ -1
AC004943.3-201ENST00000624116 EXOSC6Q5RKV6 272 aaKnown RBP8.83□□□□□ -1
AC004943.3-201ENST00000624116 ZFYVE1Q9HBF4 777 aa8.83□□□□□ -1
AC004943.3-201ENST00000624116 PIM2Q9P1W9 311 aa8.83□□□□□ -1
AC004943.3-201ENST00000624116 OAS3Q9Y6K5 1087 aaKnown RBP8.83□□□□□ -1
AC004943.3-201ENST00000624116 WDR64B1ANS9 1081 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 TIAF1O95411 115 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 TXKP42681 527 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 USP11P51784 963 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 SGO2Q562F6 1265 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 MFSD14AQ96MC6 490 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 KRTAP4-12Q9BQ66 201 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 METTL22Q9BUU2 404 aaPredicted RBP8.82□□□□□ -1
AC004943.3-201ENST00000624116 ZFYVE28Q9HCC9 887 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 NEFLP07196 543 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 GSTM4Q03013 218 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 PEAR1Q5VY43 1037 aaPredicted RBP8.81□□□□□ -1
AC004943.3-201ENST00000624116 HGSNATQ68CP4 663 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 PAOXQ6QHF9 649 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 DDX54Q8TDD1 881 aaKnown RBP8.81□□□□□ -1
AC004943.3-201ENST00000624116 GOLGA2P5Q9HBQ8 144 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 EGFL7Q9UHF1 273 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 LEMD3Q9Y2U8 911 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 GTF3C3Q9Y5Q9 886 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 FAM95CA0A1B0GW59 222 aa8.8□□□□□ -1
AC004943.3-201ENST00000624116 OSBPL1AQ9BXW6 950 aa8.8□□□□□ -1
AC004943.3-201ENST00000624116 CLEC4MQ9H2X3 399 aaPredicted RBP8.8□□□□□ -1
AC004943.3-201ENST00000624116 CYP11A1P05108 521 aa8.79□□□□□ -1
AC004943.3-201ENST00000624116 PHLDB3Q6NSJ2 640 aa8.79□□□□□ -1
AC004943.3-201ENST00000624116 ANGEL1Q9UNK9 670 aaKnown RBP8.79□□□□□ -1
AC004943.3-201ENST00000624116 USTQ9Y2C2 406 aa8.79□□□□□ -1
AC004943.3-201ENST00000624116 ZNF211Q13398 564 aaPredicted RBP8.78□□□□□ -1
AC004943.3-201ENST00000624116 LCE3BQ5TA77 95 aa8.78□□□□□ -1
AC004943.3-201ENST00000624116 GALNT12Q8IXK2 581 aa8.78□□□□□ -1
AC004943.3-201ENST00000624116 LATS2Q9NRM7 1088 aa8.78□□□□□ -1
AC004943.3-201ENST00000624116 CCDC87Q9NVE4 849 aa8.78□□□□□ -1
AC004943.3-201ENST00000624116 A0A096LPE4 126 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 A0A1W2PPZ6 126 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 TAL1P17542 331 aaPredicted RBP8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 SOX4Q06945 474 aaPredicted RBP8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 PCDH1Q08174 1060 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 NFKBIBQ15653 356 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 KRTAP1-3Q8IUG1 177 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 CCNJLQ8IV13 435 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 FBXL6Q8N531 539 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 FMNL2Q96PY5 1086 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 LIN7BQ9HAP6 207 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 BRPF3Q9ULD4 1205 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms