RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 CLRN2A0PK11 232 aa20.6■□□□□ 0.89
CD99-211ENST00000623253 MYO1BO43795 1136 aa20.6■□□□□ 0.89
CD99-211ENST00000623253 PPP1R12BO60237 982 aaPredicted RBP20.6■□□□□ 0.89
CD99-211ENST00000623253 PLIN1O60240 522 aa20.6■□□□□ 0.89
CD99-211ENST00000623253 RBM5P52756 815 aaKnown RBP eCLIP20.6■□□□□ 0.89
CD99-211ENST00000623253 ZNF804AQ7Z570 1209 aa20.6■□□□□ 0.89
CD99-211ENST00000623253 VEZTQ9HBM0 779 aa20.6■□□□□ 0.89
CD99-211ENST00000623253 ALDH1A1P00352 501 aa20.59■□□□□ 0.89
CD99-211ENST00000623253 FOXO4P98177 505 aa20.59■□□□□ 0.89
CD99-211ENST00000623253 CFAP100Q494V2 611 aa20.59■□□□□ 0.89
CD99-211ENST00000623253 TAF7LQ5H9L4 462 aa20.59■□□□□ 0.89
CD99-211ENST00000623253 CLMNQ96JQ2 1002 aa20.59■□□□□ 0.89
CD99-211ENST00000623253 MANSC4A6NHS7 340 aaPredicted RBP20.58■□□□□ 0.89
CD99-211ENST00000623253 F6X3S4 739 aa20.58■□□□□ 0.89
CD99-211ENST00000623253 VAMP4O75379 141 aa20.58■□□□□ 0.89
CD99-211ENST00000623253 INHBEP58166 350 aa20.58■□□□□ 0.89
CD99-211ENST00000623253 SUPT20HL1Q3ZLR7 823 aa20.58■□□□□ 0.89
CD99-211ENST00000623253 PRPF38BQ5VTL8 546 aaKnown RBP20.58■□□□□ 0.89
CD99-211ENST00000623253 ZNF594Q96JF6 807 aaPredicted RBP20.58■□□□□ 0.89
CD99-211ENST00000623253 PRMT6Q96LA8 375 aaPredicted RBP20.58■□□□□ 0.89
CD99-211ENST00000623253 COL1A1P02452 1464 aaPredicted RBP20.57■□□□□ 0.88
CD99-211ENST00000623253 IL1R1P14778 569 aa20.57■□□□□ 0.88
CD99-211ENST00000623253 EXOSC9Q06265 439 aaKnown RBP20.57■□□□□ 0.88
CD99-211ENST00000623253 CCDC57Q2TAC2 916 aa20.57■□□□□ 0.88
CD99-211ENST00000623253 LMBR1LQ6UX01 489 aa20.57■□□□□ 0.88
CD99-211ENST00000623253 C15orf52Q6ZUT6 534 aaKnown RBP20.57■□□□□ 0.88
CD99-211ENST00000623253 IFNL1Q8IU54 200 aa20.57■□□□□ 0.88
CD99-211ENST00000623253 MTMR14Q8NCE2 650 aa20.57■□□□□ 0.88
CD99-211ENST00000623253 CFHR5Q9BXR6 569 aa20.57■□□□□ 0.88
CD99-211ENST00000623253 CNNM1Q9NRU3 951 aa20.57■□□□□ 0.88
CD99-211ENST00000623253 PPP2R3BQ9Y5P8 575 aa20.57■□□□□ 0.88
CD99-211ENST00000623253 IRS2Q9Y4H2 1338 aa20.56■□□□□ 0.88
CD99-211ENST00000623253 SPDYE2BA6NHP3 402 aa20.56■□□□□ 0.88
CD99-211ENST00000623253 SPDYE6P0CI01 402 aa20.56■□□□□ 0.88
CD99-211ENST00000623253 LDHAL6AQ6ZMR3 332 aa20.56■□□□□ 0.88
CD99-211ENST00000623253 WNK4Q96J92 1243 aa20.56■□□□□ 0.88
CD99-211ENST00000623253 ZBTB48P10074 688 aaPredicted RBP20.55■□□□□ 0.88
CD99-211ENST00000623253 MAP3K11Q16584 847 aa20.55■□□□□ 0.88
CD99-211ENST00000623253 BEND3Q5T5X7 828 aa20.55■□□□□ 0.88
CD99-211ENST00000623253 NBPF12Q5TAG4 269 aaPredicted RBP20.55■□□□□ 0.88
CD99-211ENST00000623253 MRS2Q9HD23 443 aa20.55■□□□□ 0.88
CD99-211ENST00000623253 TRIM17Q9Y577 477 aa20.55■□□□□ 0.88
CD99-211ENST00000623253 KCNA4P22459 653 aa20.54■□□□□ 0.88
CD99-211ENST00000623253 IREB2P48200 963 aaKnown RBP20.54■□□□□ 0.88
CD99-211ENST00000623253 RASA3Q14644 834 aa20.54■□□□□ 0.88
CD99-211ENST00000623253 EPHA10Q5JZY3 1008 aa20.54■□□□□ 0.88
CD99-211ENST00000623253 PDE4DIPQ5VU43 2346 aa20.54■□□□□ 0.88
CD99-211ENST00000623253 AOX1Q06278 1338 aa20.53■□□□□ 0.88
CD99-211ENST00000623253 IGF2BP3O00425 579 aaKnown RBP eCLIP20.53■□□□□ 0.88
CD99-211ENST00000623253 FKBP1AP62942 108 aaKnown RBP20.53■□□□□ 0.88
CD99-211ENST00000623253 WDR63Q8IWG1 891 aa20.53■□□□□ 0.88
CD99-211ENST00000623253 C9orf78Q9NZ63 289 aaPredicted RBP20.53■□□□□ 0.88
CD99-211ENST00000623253 PCDH10Q9P2E7 1040 aa20.53■□□□□ 0.88
CD99-211ENST00000623253 SSC5DA1L4H1 1573 aa20.53■□□□□ 0.88
CD99-211ENST00000623253 GRM8O00222 908 aa20.52■□□□□ 0.88
CD99-211ENST00000623253 USP2O75604 605 aaPredicted RBP20.52■□□□□ 0.88
CD99-211ENST00000623253 NCBP3Q53F19 620 aaKnown RBP20.51■□□□□ 0.87
CD99-211ENST00000623253 OTUD7BQ6GQQ9 843 aa20.51■□□□□ 0.87
CD99-211ENST00000623253 SLC4A10Q6U841 1118 aa20.51■□□□□ 0.87
CD99-211ENST00000623253 OTOP1Q7RTM1 612 aa20.51■□□□□ 0.87
CD99-211ENST00000623253 ANKRD13AQ8IZ07 590 aa20.51■□□□□ 0.87
CD99-211ENST00000623253 TTF2Q9UNY4 1162 aaKnown RBP20.51■□□□□ 0.87
CD99-211ENST00000623253 UNCXA6NJT0 531 aa20.5■□□□□ 0.87
CD99-211ENST00000623253 GYG1P46976 350 aa20.5■□□□□ 0.87
CD99-211ENST00000623253 MFSD14BQ5SR56 506 aa20.5■□□□□ 0.87
CD99-211ENST00000623253 TDRD3Q9H7E2 651 aaKnown RBP20.5■□□□□ 0.87
CD99-211ENST00000623253 HIBADHP31937 336 aaKnown RBP20.49■□□□□ 0.87
CD99-211ENST00000623253 CRHR2Q13324 411 aa20.49■□□□□ 0.87
CD99-211ENST00000623253 TNFAIP1Q13829 316 aa20.49■□□□□ 0.87
CD99-211ENST00000623253 ERO1AQ96HE7 468 aa20.49■□□□□ 0.87
CD99-211ENST00000623253 ELP3Q9H9T3 547 aa20.49■□□□□ 0.87
CD99-211ENST00000623253 ZNF70Q9UC06 446 aaPredicted RBP20.49■□□□□ 0.87
CD99-211ENST00000623253 GJA5P36382 358 aa20.48■□□□□ 0.87
CD99-211ENST00000623253 CD99L2Q8TCZ2 262 aa20.48■□□□□ 0.87
CD99-211ENST00000623253 FAM205AQ6ZU69 1335 aa20.48■□□□□ 0.87
CD99-211ENST00000623253 UBE4AQ14139 1066 aa20.47■□□□□ 0.87
CD99-211ENST00000623253 SPDYE2Q495Y8 402 aa20.47■□□□□ 0.87
CD99-211ENST00000623253 TDRD7Q8NHU6 1098 aaKnown RBP20.47■□□□□ 0.87
CD99-211ENST00000623253 OPTNQ96CV9 577 aa20.47■□□□□ 0.87
CD99-211ENST00000623253 PUS3Q9BZE2 481 aaKnown RBP20.47■□□□□ 0.87
CD99-211ENST00000623253 SPINK5Q9NQ38 1064 aaPredicted RBP20.47■□□□□ 0.87
CD99-211ENST00000623253 SERPINA10Q9UK55 444 aa20.47■□□□□ 0.87
CD99-211ENST00000623253 TCP10L2B9ZVM9 353 aa20.46■□□□□ 0.87
CD99-211ENST00000623253 ALDH1L1O75891 902 aa20.46■□□□□ 0.87
CD99-211ENST00000623253 INTS3Q68E01 1043 aaKnown RBP20.46■□□□□ 0.87
CD99-211ENST00000623253 DZIP1LQ8IYY4 767 aaKnown RBP20.46■□□□□ 0.87
CD99-211ENST00000623253 FAM84BQ96KN1 310 aaPredicted RBP20.46■□□□□ 0.87
CD99-211ENST00000623253 PTPN18Q99952 460 aa20.46■□□□□ 0.87
CD99-211ENST00000623253 SRCIN1Q9C0H9 1055 aa20.46■□□□□ 0.87
CD99-211ENST00000623253 PTPN22Q9Y2R2 807 aa20.46■□□□□ 0.87
CD99-211ENST00000623253 A0A1B0GUL6 1792 aa20.46■□□□□ 0.87
CD99-211ENST00000623253 POTEFA5A3E0 1075 aa20.45■□□□□ 0.86
CD99-211ENST00000623253 SP3Q02447 781 aa20.45■□□□□ 0.86
CD99-211ENST00000623253 VPS37DQ86XT2 251 aa20.45■□□□□ 0.86
CD99-211ENST00000623253 EFCC1Q9HA90 598 aa20.45■□□□□ 0.86
CD99-211ENST00000623253 IQSEC3Q9UPP2 1182 aaPredicted RBP20.45■□□□□ 0.86
CD99-211ENST00000623253 ECM29Q5VYK3 1845 aa20.45■□□□□ 0.86
CD99-211ENST00000623253 FRAT2O75474 233 aaPredicted RBP20.44■□□□□ 0.86
CD99-211ENST00000623253 CRKP46108 304 aa20.44■□□□□ 0.86
CD99-211ENST00000623253 CHAF1AQ13111 956 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms