RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 SCARF1Q14162 830 aa8.44□□□□□ -1.06
CBWD3-219ENST00000622817 TTF1Q15361 905 aaPredicted RBP8.44□□□□□ -1.06
CBWD3-219ENST00000622817 RNF113AO15541 343 aaKnown RBP8.43□□□□□ -1.06
CBWD3-219ENST00000622817 ZFYP08048 801 aaPredicted RBP8.43□□□□□ -1.06
CBWD3-219ENST00000622817 NPR1P16066 1061 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 BCAMP50895 628 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 BECN1Q14457 450 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 CAVIN4Q5BKX8 364 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 SLC16A10Q8TF71 515 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 FAM227BQ96M60 508 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 ANKIB1Q9P2G1 1089 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 DAXXQ9UER7 740 aaPredicted RBP8.43□□□□□ -1.06
CBWD3-219ENST00000622817 PCDHB8Q9UN66 801 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 LEMD3Q9Y2U8 911 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 ZNF804BA4D1E1 1349 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 XDHP47989 1333 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 A0A0D9SFI3 127 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 SRGNP10124 158 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 ALDH1B1P30837 517 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 MCMDC2Q4G0Z9 681 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 ZSCAN25Q6NSZ9 544 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 VPS37DQ86XT2 251 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 SPATA5Q8NB90 893 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 TMEM106CQ9BVX2 250 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.43□□□□□ -1.06
CBWD3-219ENST00000622817 LSG1Q9H089 658 aaKnown RBP8.43□□□□□ -1.06
CBWD3-219ENST00000622817 IL25Q9H293 177 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 ANTXR1Q9H6X2 564 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 HELLSQ9NRZ9 838 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 HMG20BQ9P0W2 317 aa8.43□□□□□ -1.06
CBWD3-219ENST00000622817 SEMA3EO15041 775 aa8.42□□□□□ -1.06
CBWD3-219ENST00000622817 ANAPC15P60006 121 aa8.42□□□□□ -1.06
CBWD3-219ENST00000622817 RASGRF1Q13972 1273 aa8.42□□□□□ -1.06
CBWD3-219ENST00000622817 RABEP1Q15276 862 aa8.42□□□□□ -1.06
CBWD3-219ENST00000622817 ZMYM1Q5SVZ6 1142 aa8.42□□□□□ -1.06
CBWD3-219ENST00000622817 IER5LQ5T953 404 aa8.42□□□□□ -1.06
CBWD3-219ENST00000622817 PI16Q6UXB8 463 aa8.42□□□□□ -1.06
CBWD3-219ENST00000622817 FBXO33Q7Z6M2 555 aa8.42□□□□□ -1.06
CBWD3-219ENST00000622817 MASTLQ96GX5 879 aa8.42□□□□□ -1.06
CBWD3-219ENST00000622817 KIF2CQ99661 725 aa8.42□□□□□ -1.06
CBWD3-219ENST00000622817 MED23Q9ULK4 1368 aa8.42□□□□□ -1.06
CBWD3-219ENST00000622817 A0A1B0GUL6 1792 aa8.42□□□□□ -1.06
CBWD3-219ENST00000622817 CYP2E1P05181 493 aaPredicted RBP8.41□□□□□ -1.06
CBWD3-219ENST00000622817 HSPA4P34932 840 aa8.41□□□□□ -1.06
CBWD3-219ENST00000622817 GYG1P46976 350 aa8.41□□□□□ -1.06
CBWD3-219ENST00000622817 SP8Q8IXZ3 490 aa8.41□□□□□ -1.06
CBWD3-219ENST00000622817 BBXQ8WY36 941 aaPredicted RBP8.41□□□□□ -1.06
CBWD3-219ENST00000622817 FAM84BQ96KN1 310 aaPredicted RBP8.41□□□□□ -1.06
CBWD3-219ENST00000622817 ANKRD31Q8N7Z5 1873 aa8.41□□□□□ -1.06
CBWD3-219ENST00000622817 AKAP11Q9UKA4 1901 aa8.41□□□□□ -1.06
CBWD3-219ENST00000622817 CCDC171Q6TFL3 1326 aa8.41□□□□□ -1.06
CBWD3-219ENST00000622817 WTIPA6NIX2 430 aaPredicted RBP8.4□□□□□ -1.06
CBWD3-219ENST00000622817 H0YIN7 160 aa8.4□□□□□ -1.06
CBWD3-219ENST00000622817 PPEF1O14829 653 aaPredicted RBP8.4□□□□□ -1.06
CBWD3-219ENST00000622817 ATP2B4P23634 1241 aa8.4□□□□□ -1.06
CBWD3-219ENST00000622817 HIBADHP31937 336 aaKnown RBP8.4□□□□□ -1.06
CBWD3-219ENST00000622817 GPSM2P81274 684 aa8.4□□□□□ -1.06
CBWD3-219ENST00000622817 STYK1Q6J9G0 422 aa8.4□□□□□ -1.06
CBWD3-219ENST00000622817 C15orf52Q6ZUT6 534 aaKnown RBP8.4□□□□□ -1.06
CBWD3-219ENST00000622817 ZNF467Q7Z7K2 595 aaPredicted RBP8.4□□□□□ -1.06
CBWD3-219ENST00000622817 C2CD5Q86YS7 1000 aa8.4□□□□□ -1.06
CBWD3-219ENST00000622817 IL17RAQ96F46 866 aa8.4□□□□□ -1.06
CBWD3-219ENST00000622817 TMX4Q9H1E5 349 aaPredicted RBP8.4□□□□□ -1.06
CBWD3-219ENST00000622817 PIH1D3Q9NQM4 214 aaKnown RBP8.4□□□□□ -1.06
CBWD3-219ENST00000622817 PODXL2Q9NZ53 605 aa8.4□□□□□ -1.06
CBWD3-219ENST00000622817 DENND2AQ9ULE3 1009 aa8.4□□□□□ -1.06
CBWD3-219ENST00000622817 ATP6V0A2Q9Y487 856 aa8.4□□□□□ -1.06
CBWD3-219ENST00000622817 PDS5AQ29RF7 1337 aaKnown RBP8.4□□□□□ -1.06
CBWD3-219ENST00000622817 IDH1O75874 414 aaKnown RBP8.4□□□□□ -1.07
CBWD3-219ENST00000622817 PTH1RQ03431 593 aa8.4□□□□□ -1.07
CBWD3-219ENST00000622817 MAP3K12Q12852 859 aa8.4□□□□□ -1.07
CBWD3-219ENST00000622817 UBE3CQ15386 1083 aa8.4□□□□□ -1.07
CBWD3-219ENST00000622817 WASHC4Q2M389 1173 aa8.4□□□□□ -1.07
CBWD3-219ENST00000622817 IL27Q8NEV9 243 aa8.4□□□□□ -1.07
CBWD3-219ENST00000622817 APPBP2Q92624 585 aa8.4□□□□□ -1.07
CBWD3-219ENST00000622817 MAP4K1Q92918 833 aa8.4□□□□□ -1.07
CBWD3-219ENST00000622817 SNX21Q969T3 373 aa8.4□□□□□ -1.07
CBWD3-219ENST00000622817 GGA1Q9UJY5 639 aa8.4□□□□□ -1.07
CBWD3-219ENST00000622817 NSFL1CQ9UNZ2 370 aaKnown RBP8.4□□□□□ -1.07
CBWD3-219ENST00000622817 COLQQ9Y215 455 aaPredicted RBP8.4□□□□□ -1.07
CBWD3-219ENST00000622817 IRS2Q9Y4H2 1338 aa8.4□□□□□ -1.07
CBWD3-219ENST00000622817 FRAT2O75474 233 aaPredicted RBP8.39□□□□□ -1.07
CBWD3-219ENST00000622817 UFL1O94874 794 aa8.39□□□□□ -1.07
CBWD3-219ENST00000622817 KLRK1P26718 216 aa8.39□□□□□ -1.07
CBWD3-219ENST00000622817 ADD2P35612 726 aa8.39□□□□□ -1.07
CBWD3-219ENST00000622817 SLC9C2Q5TAH2 1124 aa8.39□□□□□ -1.07
CBWD3-219ENST00000622817 ZNF804AQ7Z570 1209 aa8.39□□□□□ -1.07
CBWD3-219ENST00000622817 ZNF589Q86UQ0 364 aaPredicted RBP8.39□□□□□ -1.07
CBWD3-219ENST00000622817 HSCBQ8IWL3 235 aa8.39□□□□□ -1.07
CBWD3-219ENST00000622817 ZNF622Q969S3 477 aaKnown RBP eCLIP8.39□□□□□ -1.07
CBWD3-219ENST00000622817 PDGFDQ9GZP0 370 aaPredicted RBP8.39□□□□□ -1.07
CBWD3-219ENST00000622817 MAST3O60307 1309 aa8.39□□□□□ -1.07
CBWD3-219ENST00000622817 CHGBP05060 677 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 PDE6AP16499 860 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 ZKSCAN1P17029 563 aaPredicted RBP8.38□□□□□ -1.07
CBWD3-219ENST00000622817 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 CCDC129Q6ZRS4 1044 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 KCNB2Q92953 911 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 CNKSR1Q969H4 720 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 OSBP2Q969R2 916 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms