RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 GPATCH3Q96I76 525 aa24.26■■□□□ 1.47
PDLIM2-221ENST00000622702 ZNF512BQ96KM6 892 aaPredicted RBP24.26■■□□□ 1.47
PDLIM2-221ENST00000622702 ECHDC1Q9NTX5 307 aa24.26■■□□□ 1.47
PDLIM2-221ENST00000622702 TTC41PQ6P2S7 1318 aa24.26■■□□□ 1.47
PDLIM2-221ENST00000622702 PDE1AP54750 535 aa24.26■■□□□ 1.47
PDLIM2-221ENST00000622702 OSBPL3Q9H4L5 887 aa24.26■■□□□ 1.47
PDLIM2-221ENST00000622702 SCN9AQ15858 1988 aa24.25■■□□□ 1.47
PDLIM2-221ENST00000622702 PODNQ7Z5L7 613 aa24.25■■□□□ 1.47
PDLIM2-221ENST00000622702 VPS37DQ86XT2 251 aa24.25■■□□□ 1.47
PDLIM2-221ENST00000622702 COA1Q9GZY4 146 aa24.25■■□□□ 1.47
PDLIM2-221ENST00000622702 AOX1Q06278 1338 aa24.24■■□□□ 1.47
PDLIM2-221ENST00000622702 UQCRFS1P1P0C7P4 283 aa24.24■■□□□ 1.47
PDLIM2-221ENST00000622702 ARID4AP29374 1257 aaPredicted RBP24.24■■□□□ 1.47
PDLIM2-221ENST00000622702 GNL3LQ9NVN8 582 aaKnown RBP24.24■■□□□ 1.47
PDLIM2-221ENST00000622702 SCN4AP35499 1836 aa24.23■■□□□ 1.47
PDLIM2-221ENST00000622702 IQCA1LA6NCM1 817 aa24.23■■□□□ 1.47
PDLIM2-221ENST00000622702 PSMD14O00487 310 aa24.23■■□□□ 1.47
PDLIM2-221ENST00000622702 ATP5JP18859 108 aa24.23■■□□□ 1.47
PDLIM2-221ENST00000622702 TTC39AQ5SRH9 613 aa24.23■■□□□ 1.47
PDLIM2-221ENST00000622702 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.23■■□□□ 1.47
PDLIM2-221ENST00000622702 CD209Q9NNX6 404 aa24.23■■□□□ 1.47
PDLIM2-221ENST00000622702 SEMA3EO15041 775 aa24.22■■□□□ 1.47
PDLIM2-221ENST00000622702 IL1R1P14778 569 aa24.22■■□□□ 1.47
PDLIM2-221ENST00000622702 SKAP1Q86WV1 359 aa24.22■■□□□ 1.47
PDLIM2-221ENST00000622702 TDRD7Q8NHU6 1098 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-221ENST00000622702 ERC2O15083 957 aa24.21■■□□□ 1.47
PDLIM2-221ENST00000622702 GMPSP49915 693 aaPredicted RBP24.21■■□□□ 1.47
PDLIM2-221ENST00000622702 SCNN1DP51172 638 aa24.21■■□□□ 1.47
PDLIM2-221ENST00000622702 PI4K2BQ8TCG2 481 aa24.21■■□□□ 1.47
PDLIM2-221ENST00000622702 HACL1Q9UJ83 578 aa24.21■■□□□ 1.47
PDLIM2-221ENST00000622702 GLRX3O76003 335 aaKnown RBP24.2■■□□□ 1.47
PDLIM2-221ENST00000622702 LMOD1P29536 600 aaPredicted RBP24.2■■□□□ 1.47
PDLIM2-221ENST00000622702 TSHZ3Q63HK5 1081 aa24.2■■□□□ 1.47
PDLIM2-221ENST00000622702 ZBTB12Q9Y330 459 aaPredicted RBP24.2■■□□□ 1.47
PDLIM2-221ENST00000622702 PSME4Q14997 1843 aa24.2■■□□□ 1.46
PDLIM2-221ENST00000622702 RASGRF1Q13972 1273 aa24.19■■□□□ 1.46
PDLIM2-221ENST00000622702 TAF1DQ9H5J8 278 aaPredicted RBP24.19■■□□□ 1.46
PDLIM2-221ENST00000622702 USP17L3A6NCW0 530 aa24.19■■□□□ 1.46
PDLIM2-221ENST00000622702 USP17L4A6NCW7 530 aa24.19■■□□□ 1.46
PDLIM2-221ENST00000622702 TOMM70O94826 608 aa24.19■■□□□ 1.46
PDLIM2-221ENST00000622702 MCAMP43121 646 aa24.19■■□□□ 1.46
PDLIM2-221ENST00000622702 SCARF1Q14162 830 aa24.19■■□□□ 1.46
PDLIM2-221ENST00000622702 USP17L1Q7RTZ2 530 aa24.19■■□□□ 1.46
PDLIM2-221ENST00000622702 PDS5AQ29RF7 1337 aaKnown RBP24.18■■□□□ 1.46
PDLIM2-221ENST00000622702 VIL1P09327 827 aaKnown RBP24.18■■□□□ 1.46
PDLIM2-221ENST00000622702 EPHX2P34913 555 aa24.18■■□□□ 1.46
PDLIM2-221ENST00000622702 EPS15P42566 896 aa24.18■■□□□ 1.46
PDLIM2-221ENST00000622702 RGS3P49796 1198 aa24.18■■□□□ 1.46
PDLIM2-221ENST00000622702 FBXW7Q969H0 707 aa24.18■■□□□ 1.46
PDLIM2-221ENST00000622702 GPRC5DQ9NZD1 345 aa24.18■■□□□ 1.46
PDLIM2-221ENST00000622702 HMG20BQ9P0W2 317 aa24.18■■□□□ 1.46
PDLIM2-221ENST00000622702 DENND2AQ9ULE3 1009 aa24.18■■□□□ 1.46
PDLIM2-221ENST00000622702 AKAP11Q9UKA4 1901 aa24.17■■□□□ 1.46
PDLIM2-221ENST00000622702 HAUS7Q99871 368 aa24.17■■□□□ 1.46
PDLIM2-221ENST00000622702 BOLA2Q9H3K6 86 aa24.17■■□□□ 1.46
PDLIM2-221ENST00000622702 IQSEC3Q9UPP2 1182 aaPredicted RBP24.17■■□□□ 1.46
PDLIM2-221ENST00000622702 COL1A1P02452 1464 aaPredicted RBP24.16■■□□□ 1.46
PDLIM2-221ENST00000622702 FRAT2O75474 233 aaPredicted RBP24.16■■□□□ 1.46
PDLIM2-221ENST00000622702 RSBN1LQ6PCB5 846 aaPredicted RBP24.16■■□□□ 1.46
PDLIM2-221ENST00000622702 SPATA5Q8NB90 893 aa24.16■■□□□ 1.46
PDLIM2-221ENST00000622702 RPS12P25398 132 aaKnown RBP24.15■■□□□ 1.46
PDLIM2-221ENST00000622702 GTF2IP78347 998 aa24.15■■□□□ 1.46
PDLIM2-221ENST00000622702 DPF2Q92785 391 aa24.15■■□□□ 1.46
PDLIM2-221ENST00000622702 CNOT7Q9UIV1 285 aaKnown RBP24.15■■□□□ 1.46
PDLIM2-221ENST00000622702 FAM205AQ6ZU69 1335 aa24.15■■□□□ 1.46
PDLIM2-221ENST00000622702 EAPPQ56P03 285 aaPredicted RBP24.14■■□□□ 1.46
PDLIM2-221ENST00000622702 DACT2Q5SW24 774 aa24.14■■□□□ 1.46
PDLIM2-221ENST00000622702 TTC22Q5TAA0 569 aa24.14■■□□□ 1.46
PDLIM2-221ENST00000622702 STRIP1Q5VSL9 837 aa24.14■■□□□ 1.46
PDLIM2-221ENST00000622702 TTLL5Q6EMB2 1281 aa24.14■■□□□ 1.46
PDLIM2-221ENST00000622702 PI16Q6UXB8 463 aa24.14■■□□□ 1.46
PDLIM2-221ENST00000622702 ZNF646O15015 1829 aaPredicted RBP24.14■■□□□ 1.45
PDLIM2-221ENST00000622702 RBM46Q8TBY0 533 aaKnown RBP24.13■■□□□ 1.45
PDLIM2-221ENST00000622702 MXD3Q9BW11 206 aa24.13■■□□□ 1.45
PDLIM2-221ENST00000622702 SNRKQ9NRH2 765 aa24.13■■□□□ 1.45
PDLIM2-221ENST00000622702 MYH13Q9UKX3 1938 aa24.13■■□□□ 1.45
PDLIM2-221ENST00000622702 SHTN1A0MZ66 631 aa24.13■■□□□ 1.45
PDLIM2-221ENST00000622702 POTEIP0CG38 1075 aa24.13■■□□□ 1.45
PDLIM2-221ENST00000622702 POTEJP0CG39 1038 aa24.13■■□□□ 1.45
PDLIM2-221ENST00000622702 ZAP70P43403 619 aa24.13■■□□□ 1.45
PDLIM2-221ENST00000622702 C1QTNF8P60827 252 aa24.13■■□□□ 1.45
PDLIM2-221ENST00000622702 PNMA8AQ86V59 439 aaPredicted RBP24.13■■□□□ 1.45
PDLIM2-221ENST00000622702 MICALL2Q8IY33 904 aa24.13■■□□□ 1.45
PDLIM2-221ENST00000622702 ADARB2Q9NS39 739 aaKnown RBP24.13■■□□□ 1.45
PDLIM2-221ENST00000622702 H7C1D1 291 aa24.12■■□□□ 1.45
PDLIM2-221ENST00000622702 AGBL3Q8NEM8 1001 aa24.12■■□□□ 1.45
PDLIM2-221ENST00000622702 WDR66Q8TBY9 1149 aa24.12■■□□□ 1.45
PDLIM2-221ENST00000622702 DNAJC2Q99543 621 aaKnown RBP24.12■■□□□ 1.45
PDLIM2-221ENST00000622702 CHAF1AQ13111 956 aaPredicted RBP24.11■■□□□ 1.45
PDLIM2-221ENST00000622702 GMLQ99445 158 aa24.11■■□□□ 1.45
PDLIM2-221ENST00000622702 PAG1Q9NWQ8 432 aa24.11■■□□□ 1.45
PDLIM2-221ENST00000622702 JAG2Q9Y219 1238 aa24.11■■□□□ 1.45
PDLIM2-221ENST00000622702 SALL1Q9NSC2 1324 aa24.11■■□□□ 1.45
PDLIM2-221ENST00000622702 CYP2E1P05181 493 aaPredicted RBP24.1■■□□□ 1.45
PDLIM2-221ENST00000622702 GSPT1P15170 499 aaKnown RBP24.1■■□□□ 1.45
PDLIM2-221ENST00000622702 USP50Q70EL3 339 aaPredicted RBP24.1■■□□□ 1.45
PDLIM2-221ENST00000622702 TBC1D22AQ8WUA7 517 aa24.1■■□□□ 1.45
PDLIM2-221ENST00000622702 CLEC11AQ9Y240 323 aa24.1■■□□□ 1.45
PDLIM2-221ENST00000622702 NDUFB9Q9Y6M9 179 aa24.1■■□□□ 1.45
PDLIM2-221ENST00000622702 BMP2KLQ5H9B9 411 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms