RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 ST8SIA5O15466 376 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 ATP9BO43861 1147 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 LZTS3O60299 673 aaPredicted RBP6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 YY1P25490 414 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 PRKAR2BP31323 418 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 SCTRP47872 440 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 C1orf141Q5JVX7 400 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 DIEXFQ68CQ4 756 aaKnown RBP6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 CC2D2BQ6DHV5 1058 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 INTS5Q6P9B9 1019 aaKnown RBP6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 TBC1D9Q6ZT07 1266 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 MCM10Q7L590 875 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 PLEKHM2Q8IWE5 1019 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 DCAF5Q96JK2 942 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 THUMPD2Q9BTF0 503 aaKnown RBP6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 C1orf115Q9H7X2 142 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 MIS18AQ9NYP9 233 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 DOLKQ9UPQ8 538 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 ZNF831Q5JPB2 1677 aa6.67□□□□□ -1.34
RPRD1B-209ENST00000622494 ERVV-2B6SEH9 535 aa6.66□□□□□ -1.34
RPRD1B-209ENST00000622494 CRKLP46109 303 aaKnown RBP6.66□□□□□ -1.34
RPRD1B-209ENST00000622494 DDR1Q08345 913 aa6.66□□□□□ -1.34
RPRD1B-209ENST00000622494 CBLBQ13191 982 aa6.66□□□□□ -1.34
RPRD1B-209ENST00000622494 KDF1Q8NAX2 398 aaPredicted RBP6.66□□□□□ -1.34
RPRD1B-209ENST00000622494 SMARCC1Q92922 1105 aaPredicted RBP6.66□□□□□ -1.34
RPRD1B-209ENST00000622494 PPP1R12CQ9BZL4 782 aa6.66□□□□□ -1.34
RPRD1B-209ENST00000622494 SLC52A2Q9HAB3 445 aa6.66□□□□□ -1.34
RPRD1B-209ENST00000622494 CYLDQ9NQC7 956 aa6.66□□□□□ -1.34
RPRD1B-209ENST00000622494 ZBTB1Q9Y2K1 713 aa6.66□□□□□ -1.34
RPRD1B-209ENST00000622494 KIF13BQ9NQT8 1826 aa6.66□□□□□ -1.34
RPRD1B-209ENST00000622494 NPC1L1Q9UHC9 1359 aa6.66□□□□□ -1.34
RPRD1B-209ENST00000622494 BRCA1P38398 1863 aaKnown RBP6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 ANKRD31Q8N7Z5 1873 aa6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 PALM3A6NDB9 673 aaPredicted RBP6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 ADH1AP07327 375 aa6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 MMP10P09238 476 aa6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 SKIP12755 728 aa6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 POLD1P28340 1107 aa6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 GPR162Q16538 588 aa6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 AMOTQ4VCS5 1084 aa6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 AKAP4Q5JQC9 854 aa6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 TRIM46Q7Z4K8 759 aa6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 SLC51AQ86UW1 340 aa6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 OSBPL3Q9H4L5 887 aa6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 DACH1Q9UI36 760 aa6.65□□□□□ -1.34
RPRD1B-209ENST00000622494 CARMIL3Q8ND23 1372 aa6.65□□□□□ -1.35
RPRD1B-209ENST00000622494 MAP3K5Q99683 1374 aa6.65□□□□□ -1.35
RPRD1B-209ENST00000622494 COL11A2P13942 1736 aaPredicted RBP6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 CACNA1SQ13698 1873 aa6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 A0A0G2JLW4 131 aa6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 USP17L5A8MUK1 530 aa6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 U2AF1L5P0DN76 240 aaPredicted RBP6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 GYS1P13807 737 aa6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 CANXP27824 592 aaKnown RBP6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 U2AF1Q01081 240 aaKnown RBP eCLIP6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 USP4Q13107 963 aa6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 MRPL14Q6P1L8 145 aaKnown RBP6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 ZNF496Q96IT1 587 aaPredicted RBP6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 ATP13A2Q9NQ11 1180 aa6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 TFIP11Q9UBB9 837 aaKnown RBP6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 MAFBQ9Y5Q3 323 aaPredicted RBP6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 PXDNLA1KZ92 1463 aa6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 SCN7AQ01118 1682 aa6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 KDM3BQ7LBC6 1761 aa6.64□□□□□ -1.35
RPRD1B-209ENST00000622494 USP17L3A6NCW0 530 aa6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 USP17L4A6NCW7 530 aa6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 A1BGP04217 495 aa6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 CYP19A1P11511 503 aaPredicted RBP6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 SSFA2P28290 1259 aa6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 SOS1Q07889 1333 aaPredicted RBP6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 CCDC184Q52MB2 194 aa6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 USP17L2Q6R6M4 530 aa6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 C10orf71Q711Q0 1435 aa6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 USP17L1Q7RTZ2 530 aa6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 CCDC146Q8IYE0 955 aa6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 SLC16A10Q8TF71 515 aa6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 ZNF428Q96B54 188 aa6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 CNTNAP4Q9C0A0 1308 aa6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 RRP7AQ9Y3A4 280 aaKnown RBP6.63□□□□□ -1.35
RPRD1B-209ENST00000622494 BCORQ6W2J9 1755 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 USP42Q9H9J4 1324 aaKnown RBP6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 RPS6KA4O75676 772 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 MYCP01106 439 aaPredicted RBP6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 HSP90AB1P08238 724 aaKnown RBP6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 BMP1P13497 986 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 DPEP1P16444 411 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 CHRNA5P30532 468 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 NCOA4Q13772 614 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 EML3Q32P44 896 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 OXLD1Q5BKU9 147 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 TRAPPC3LQ5T215 181 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 USPL1Q5W0Q7 1092 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 BICDL1Q6ZP65 573 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 CYP2U1Q7Z449 544 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 LINC00528Q8N1L1 170 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 ZNF526Q8TF50 670 aaPredicted RBP6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 TSEN34Q9BSV6 310 aaKnown RBP6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 CCDC87Q9NVE4 849 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 SERPINA10Q9UK55 444 aa6.62□□□□□ -1.35
RPRD1B-209ENST00000622494 RTCBQ9Y3I0 505 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms