RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 SMC3Q9UQE7 1217 aa14.84□□□□□ -0.03
SCAMP1-207ENST00000621999 ZNF532Q9HCE3 1301 aa14.83□□□□□ -0.03
SCAMP1-207ENST00000621999 MCTP1Q6DN14 999 aa14.83□□□□□ -0.04
SCAMP1-207ENST00000621999 C3orf67Q6ZVT6 689 aa14.83□□□□□ -0.04
SCAMP1-207ENST00000621999 NUP133Q8WUM0 1156 aa14.83□□□□□ -0.04
SCAMP1-207ENST00000621999 VEZTQ9HBM0 779 aa14.83□□□□□ -0.04
SCAMP1-207ENST00000621999 GOLGA6L4A6NEF3 574 aa14.83□□□□□ -0.04
SCAMP1-207ENST00000621999 AATFQ9NY61 560 aaKnown RBP eCLIP14.83□□□□□ -0.04
SCAMP1-207ENST00000621999 DDR1Q08345 913 aa14.83□□□□□ -0.04
SCAMP1-207ENST00000621999 IKQ13123 557 aaPredicted RBP14.83□□□□□ -0.04
SCAMP1-207ENST00000621999 KIAA0825Q8IV33 1275 aa14.83□□□□□ -0.04
SCAMP1-207ENST00000621999 COL18A1P39060 1754 aa14.82□□□□□ -0.04
SCAMP1-207ENST00000621999 RFX5P48382 616 aaPredicted RBP14.82□□□□□ -0.04
SCAMP1-207ENST00000621999 APPBP2Q92624 585 aa14.82□□□□□ -0.04
SCAMP1-207ENST00000621999 MYO1BO43795 1136 aa14.82□□□□□ -0.04
SCAMP1-207ENST00000621999 CCDC93Q567U6 631 aa14.82□□□□□ -0.04
SCAMP1-207ENST00000621999 GPAA1O43292 621 aa14.82□□□□□ -0.04
SCAMP1-207ENST00000621999 CASP7P55210 303 aa14.82□□□□□ -0.04
SCAMP1-207ENST00000621999 MCM9Q9NXL9 1143 aa14.82□□□□□ -0.04
SCAMP1-207ENST00000621999 CCDC171Q6TFL3 1326 aa14.81□□□□□ -0.04
SCAMP1-207ENST00000621999 SCNN1DP51172 638 aa14.81□□□□□ -0.04
SCAMP1-207ENST00000621999 ZNF444Q8N0Y2 327 aaPredicted RBP14.81□□□□□ -0.04
SCAMP1-207ENST00000621999 HMG20BQ9P0W2 317 aa14.81□□□□□ -0.04
SCAMP1-207ENST00000621999 TTF2Q9UNY4 1162 aaKnown RBP14.81□□□□□ -0.04
SCAMP1-207ENST00000621999 RASGRF1Q13972 1273 aa14.81□□□□□ -0.04
SCAMP1-207ENST00000621999 VPS37CA5D8V6 355 aaPredicted RBP14.81□□□□□ -0.04
SCAMP1-207ENST00000621999 POLRMTO00411 1230 aaKnown RBP14.81□□□□□ -0.04
SCAMP1-207ENST00000621999 EIF6P56537 245 aaKnown RBP14.81□□□□□ -0.04
SCAMP1-207ENST00000621999 GPSM2P81274 684 aa14.81□□□□□ -0.04
SCAMP1-207ENST00000621999 CCDC69A6NI79 296 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 PLCH1Q4KWH8 1693 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 CAMKK2Q96RR4 588 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 LRRC2Q9BYS8 371 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 OSBPL3Q9H4L5 887 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 A0A0D9SFI3 127 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 SGSM2O43147 1006 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 PDE6AP16499 860 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 MFSD6Q6ZSS7 791 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 HELLSQ9NRZ9 838 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 PNPLA7Q6ZV29 1317 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 RAD17O75943 681 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 SLC10A5Q5PT55 438 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 AMIGO3Q86WK7 504 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 TEX11Q8IYF3 940 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 TBC1D22AQ8WUA7 517 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 TBC1D32Q96NH3 1257 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 MTFR1LQ9H019 292 aa14.8□□□□□ -0.04
SCAMP1-207ENST00000621999 MCAMP43121 646 aa14.79□□□□□ -0.04
SCAMP1-207ENST00000621999 PI4K2BQ8TCG2 481 aa14.79□□□□□ -0.04
SCAMP1-207ENST00000621999 ABCC12Q96J65 1359 aa14.79□□□□□ -0.04
SCAMP1-207ENST00000621999 DPEP1P16444 411 aa14.79□□□□□ -0.04
SCAMP1-207ENST00000621999 CRAMP1Q96RY5 1269 aa14.79□□□□□ -0.04
SCAMP1-207ENST00000621999 CTDP1Q9Y5B0 961 aaPredicted RBP14.79□□□□□ -0.04
SCAMP1-207ENST00000621999 MCM2P49736 904 aa14.79□□□□□ -0.04
SCAMP1-207ENST00000621999 NEK1Q96PY6 1258 aa14.79□□□□□ -0.04
SCAMP1-207ENST00000621999 RNF41Q9H4P4 317 aaPredicted RBP14.79□□□□□ -0.04
SCAMP1-207ENST00000621999 ZNF287Q9HBT7 754 aa14.79□□□□□ -0.04
SCAMP1-207ENST00000621999 SAP30BPQ9UHR5 308 aaKnown RBP14.78□□□□□ -0.04
SCAMP1-207ENST00000621999 ANKRD1Q15327 319 aa14.78□□□□□ -0.04
SCAMP1-207ENST00000621999 SOGA3Q5TF21 947 aa14.78□□□□□ -0.04
SCAMP1-207ENST00000621999 IFIT3O14879 490 aaKnown RBP14.78□□□□□ -0.04
SCAMP1-207ENST00000621999 TRIM29Q14134 588 aa14.78□□□□□ -0.04
SCAMP1-207ENST00000621999 OLFM4Q6UX06 510 aa14.78□□□□□ -0.04
SCAMP1-207ENST00000621999 CHST3Q7LGC8 479 aa14.78□□□□□ -0.04
SCAMP1-207ENST00000621999 SP8Q8IXZ3 490 aa14.78□□□□□ -0.04
SCAMP1-207ENST00000621999 TSPY2A6NKD2 308 aa14.78□□□□□ -0.04
SCAMP1-207ENST00000621999 HLA-DOAP06340 250 aa14.78□□□□□ -0.04
SCAMP1-207ENST00000621999 CC2D2BQ6DHV5 1058 aa14.78□□□□□ -0.04
SCAMP1-207ENST00000621999 PIBF1Q8WXW3 757 aa14.78□□□□□ -0.04
SCAMP1-207ENST00000621999 SLFNL1Q499Z3 407 aa14.77□□□□□ -0.04
SCAMP1-207ENST00000621999 IQCA1Q86XH1 822 aa14.77□□□□□ -0.04
SCAMP1-207ENST00000621999 RTKN2Q8IZC4 609 aa14.77□□□□□ -0.04
SCAMP1-207ENST00000621999 USP26Q9BXU7 913 aa14.77□□□□□ -0.04
SCAMP1-207ENST00000621999 PLCG2P16885 1265 aa14.77□□□□□ -0.04
SCAMP1-207ENST00000621999 PDE4BQ07343 736 aa14.77□□□□□ -0.04
SCAMP1-207ENST00000621999 RAB11FIP4Q86YS3 637 aa14.77□□□□□ -0.04
SCAMP1-207ENST00000621999 CCDC82Q8N4S0 544 aa14.77□□□□□ -0.04
SCAMP1-207ENST00000621999 ZNF277Q9NRM2 450 aaPredicted RBP14.77□□□□□ -0.04
SCAMP1-207ENST00000621999 CLEC11AQ9Y240 323 aa14.77□□□□□ -0.04
SCAMP1-207ENST00000621999 K7ELQ4 463 aaPredicted RBP14.77□□□□□ -0.05
SCAMP1-207ENST00000621999 GNAT2P19087 354 aa14.77□□□□□ -0.05
SCAMP1-207ENST00000621999 SCARF1Q14162 830 aa14.77□□□□□ -0.05
SCAMP1-207ENST00000621999 AOC3Q16853 763 aa14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 CREB3L3Q68CJ9 461 aa14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 FAM84BQ96KN1 310 aaPredicted RBP14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 TCP10Q12799 353 aa14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 TTLL12Q14166 644 aaPredicted RBP14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 NCOA7Q8NI08 942 aa14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 PDGFDQ9GZP0 370 aaPredicted RBP14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 RAD50Q92878 1312 aa14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 TAOK3Q9H2K8 898 aa14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 CD209Q9NNX6 404 aa14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 ATP6V0A2Q9Y487 856 aa14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 PPFIA3O75145 1194 aa14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 GBP4Q96PP9 640 aa14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 PIH1D3Q9NQM4 214 aaKnown RBP14.76□□□□□ -0.05
SCAMP1-207ENST00000621999 COL22A1Q8NFW1 1626 aaPredicted RBP14.75□□□□□ -0.05
SCAMP1-207ENST00000621999 SRGNP10124 158 aa14.75□□□□□ -0.05
SCAMP1-207ENST00000621999 CPA1P15085 419 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms