RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 C4BP0C0L5 1744 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 MYO5AQ9Y4I1 1855 aaKnown RBP11.08□□□□□ -0.63
PDPN-212ENST00000621990 IRS4O14654 1257 aaPredicted RBP11.08□□□□□ -0.64
PDPN-212ENST00000621990 NR1I2O75469 434 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 ADD2P35612 726 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 ZNF34Q8IZ26 560 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDPN-212ENST00000621990 LAMB2P55268 1798 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 ROBO1Q9Y6N7 1651 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 PDE8AO60658 829 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 PDE8BO95263 885 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 FDPSP14324 419 aaKnown RBP11.08□□□□□ -0.64
PDPN-212ENST00000621990 GPTP24298 496 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 ARID4AP29374 1257 aaPredicted RBP11.08□□□□□ -0.64
PDPN-212ENST00000621990 KIAA2012Q0VF49 1180 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 TTF1Q15361 905 aaPredicted RBP11.08□□□□□ -0.64
PDPN-212ENST00000621990 WASHC4Q2M389 1173 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 ZSCAN25Q6NSZ9 544 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 PI16Q6UXB8 463 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 CCDC85AQ96PX6 553 aaPredicted RBP11.08□□□□□ -0.64
PDPN-212ENST00000621990 NCOA5Q9HCD5 579 aaKnown RBP11.08□□□□□ -0.64
PDPN-212ENST00000621990 PHLPP1O60346 1717 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 NRAPQ86VF7 1730 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 UBN2Q6ZU65 1347 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 GPAA1O43292 621 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 CCT2P78371 535 aaKnown RBP11.08□□□□□ -0.64
PDPN-212ENST00000621990 UBE3CQ15386 1083 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 ILDR1Q86SU0 546 aaPredicted RBP11.08□□□□□ -0.64
PDPN-212ENST00000621990 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
PDPN-212ENST00000621990 CAVIN2O95810 425 aa11.07□□□□□ -0.64
PDPN-212ENST00000621990 FGFR2P21802 821 aa11.07□□□□□ -0.64
PDPN-212ENST00000621990 ANTXR2P58335 489 aa11.07□□□□□ -0.64
PDPN-212ENST00000621990 CAMK4Q16566 473 aa11.07□□□□□ -0.64
PDPN-212ENST00000621990 PIBF1Q8WXW3 757 aa11.07□□□□□ -0.64
PDPN-212ENST00000621990 CHST3Q7LGC8 479 aa11.07□□□□□ -0.64
PDPN-212ENST00000621990 NCOA7Q8NI08 942 aa11.07□□□□□ -0.64
PDPN-212ENST00000621990 NBPF3Q9H094 633 aa11.07□□□□□ -0.64
PDPN-212ENST00000621990 TRMT112Q9UI30 125 aaKnown RBP11.07□□□□□ -0.64
PDPN-212ENST00000621990 ZMYM6O95789 1325 aa11.06□□□□□ -0.64
PDPN-212ENST00000621990 MROH5Q6ZUA9 1318 aa11.06□□□□□ -0.64
PDPN-212ENST00000621990 EXOC5O00471 708 aa11.06□□□□□ -0.64
PDPN-212ENST00000621990 PRC1O43663 620 aa11.06□□□□□ -0.64
PDPN-212ENST00000621990 TPM3P06753 285 aa11.06□□□□□ -0.64
PDPN-212ENST00000621990 BICD2Q8TD16 824 aa11.06□□□□□ -0.64
PDPN-212ENST00000621990 ZNF396Q96N95 335 aaPredicted RBP11.06□□□□□ -0.64
PDPN-212ENST00000621990 CNNM1Q9NRU3 951 aa11.06□□□□□ -0.64
PDPN-212ENST00000621990 TCRBV5S4A2TA0A5A2 114 aa11.06□□□□□ -0.64
PDPN-212ENST00000621990 ZNF213O14771 459 aa11.06□□□□□ -0.64
PDPN-212ENST00000621990 DHX16O60231 1041 aaKnown RBP11.06□□□□□ -0.64
PDPN-212ENST00000621990 EIF5P55010 431 aaKnown RBP11.06□□□□□ -0.64
PDPN-212ENST00000621990 PUM3Q15397 648 aaKnown RBP11.06□□□□□ -0.64
PDPN-212ENST00000621990 DZIP3Q86Y13 1208 aaKnown RBP11.06□□□□□ -0.64
PDPN-212ENST00000621990 USP28Q96RU2 1077 aa11.06□□□□□ -0.64
PDPN-212ENST00000621990 GPHNQ9NQX3 736 aaPredicted RBP11.06□□□□□ -0.64
PDPN-212ENST00000621990 SPTLC3Q9NUV7 552 aa11.06□□□□□ -0.64
PDPN-212ENST00000621990 TIAM2Q8IVF5 1701 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 CTAGE5O15320 804 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 UQCRFS1P1P0C7P4 283 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 HAND2P61296 217 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 SNW1Q13573 536 aaKnown RBP11.05□□□□□ -0.64
PDPN-212ENST00000621990 ANO6Q4KMQ2 910 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 CCDC102BQ68D86 513 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 CKAP2LQ8IYA6 745 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 ENGASEQ8NFI3 743 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 TDRD7Q8NHU6 1098 aaKnown RBP11.05□□□□□ -0.64
PDPN-212ENST00000621990 CDCA7Q9BWT1 371 aaPredicted RBP11.05□□□□□ -0.64
PDPN-212ENST00000621990 CBX8Q9HC52 389 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 PIH1D3Q9NQM4 214 aaKnown RBP11.05□□□□□ -0.64
PDPN-212ENST00000621990 SLC9C2Q5TAH2 1124 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 LPIN2Q92539 896 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 RTEL1Q9NZ71 1219 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 RTL9Q8NET4 1388 aa11.05□□□□□ -0.64
PDPN-212ENST00000621990 ALX1Q15699 326 aa11.04□□□□□ -0.64
PDPN-212ENST00000621990 INTS5Q6P9B9 1019 aaKnown RBP11.04□□□□□ -0.64
PDPN-212ENST00000621990 CHD4Q14839 1912 aa11.04□□□□□ -0.64
PDPN-212ENST00000621990 KLF18A0A0U1RQI7 1052 aa11.04□□□□□ -0.64
PDPN-212ENST00000621990 PHKA1P46020 1223 aa11.04□□□□□ -0.64
PDPN-212ENST00000621990 SASS6Q6UVJ0 657 aa11.04□□□□□ -0.64
PDPN-212ENST00000621990 RALYLQ86SE5 291 aaKnown RBP11.04□□□□□ -0.64
PDPN-212ENST00000621990 LUZP1Q86V48 1076 aa11.04□□□□□ -0.64
PDPN-212ENST00000621990 FBXO18Q8NFZ0 1043 aa11.04□□□□□ -0.64
PDPN-212ENST00000621990 FTOQ9C0B1 505 aaKnown RBP eCLIP11.04□□□□□ -0.64
PDPN-212ENST00000621990 GOLPH3LQ9H4A5 285 aa11.04□□□□□ -0.64
PDPN-212ENST00000621990 TTC12Q9H892 705 aaPredicted RBP11.04□□□□□ -0.64
PDPN-212ENST00000621990 ZNF831Q5JPB2 1677 aa11.04□□□□□ -0.64
PDPN-212ENST00000621990 GOLGA8BA8MQT2 603 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 PDE6AP16499 860 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 FAM160A1Q05DH4 1040 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 PLA2G4DQ86XP0 818 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 CCAR1Q8IX12 1150 aaKnown RBP11.03□□□□□ -0.64
PDPN-212ENST00000621990 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 THRAP3Q9Y2W1 955 aaKnown RBP11.03□□□□□ -0.64
PDPN-212ENST00000621990 ECM29Q5VYK3 1845 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 BCORQ6W2J9 1755 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 COL5A3P25940 1745 aaPredicted RBP11.03□□□□□ -0.64
PDPN-212ENST00000621990 A0A1W2PQ27 194 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 A0A1W2PQ64 194 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 A0A1W2PQD8 194 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.03□□□□□ -0.64
PDPN-212ENST00000621990 TBC1D10CQ8IV04 446 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms