RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 WHAMMP3Q1A5X7 153 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 TRIM68Q6AZZ1 485 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 C17orf53Q8N3J3 647 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-210ENST00000621266 ZNF408Q9H9D4 720 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 ZNF213O14771 459 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 ZNF131P52739 623 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 TYRO3Q06418 890 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 CFAP157Q5JU67 520 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 TBC1D5Q92609 795 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 AKAP2Q9Y2D5 859 aa11.19□□□□□ -0.62
COL4A6-210ENST00000621266 GOLGA6CA6NDK9 693 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 NDC80O14777 642 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 GOLGA6DP0CG33 693 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 KIF5AQ12840 1032 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 HS1BP3Q53T59 392 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 CCDC174Q6PII3 467 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 LRRC59Q96AG4 307 aaKnown RBP11.18□□□□□ -0.62
COL4A6-210ENST00000621266 NAPBQ9H115 298 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 GOLGA6AQ9NYA3 693 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 USP16Q9Y5T5 823 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 PBRM1Q86U86 1689 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 IFIT3O14879 490 aaKnown RBP11.18□□□□□ -0.62
COL4A6-210ENST00000621266 KRT86O43790 486 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 OAS2P29728 719 aaKnown RBP11.18□□□□□ -0.62
COL4A6-210ENST00000621266 PSMD6Q15008 389 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 SYCP3Q8IZU3 236 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 KAT6BQ8WYB5 2073 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 NKTRP30414 1462 aaKnown RBP11.18□□□□□ -0.62
COL4A6-210ENST00000621266 CCDC38Q502W7 563 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 PPP4R3AQ6IN85 833 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 BAIAP2L1Q9UHR4 511 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 TUBB4AP04350 444 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 TSHZ3Q63HK5 1081 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 TMEM87AQ8NBN3 555 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 SMC1BQ8NDV3 1235 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 CCDC110Q8TBZ0 833 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 SETDB2Q96T68 719 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 STK32BQ9NY57 414 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 IFNKQ9P0W0 207 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 RIMS2Q9UQ26 1411 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 VTI1AQ96AJ9 217 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 EPSTI1Q96J88 318 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 SPAG5Q96R06 1193 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 PLVAPQ9BX97 442 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 DNAI2Q9GZS0 605 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 TCP11L1Q9NUJ3 509 aa11.18□□□□□ -0.62
COL4A6-210ENST00000621266 GBP5Q96PP8 586 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 DBF4Q9UBU7 674 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-210ENST00000621266 ANKRD36BQ8N2N9 1353 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 KRT83P78385 493 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 DNM1Q05193 864 aaKnown RBP11.17□□□□□ -0.62
COL4A6-210ENST00000621266 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-210ENST00000621266 ATP5J2-PTCD1G3V325 749 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 APBA3O96018 575 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 IFNL2Q8IZJ0 200 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 GSDMBQ8TAX9 411 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 MKNK2Q9HBH9 465 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 ORC3Q9UBD5 711 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-210ENST00000621266 MRVI1Q9Y6F6 885 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 DUOX2Q9NRD8 1548 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 UHRF1BP1LA0JNW5 1464 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 FERMT1Q9BQL6 677 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 SSX2IPQ9Y2D8 614 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 STK38LQ9Y2H1 464 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 A0A087WZG4 1122 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 ERCC5P28715 1186 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-210ENST00000621266 SYCP2Q9BX26 1530 aa11.17□□□□□ -0.62
COL4A6-210ENST00000621266 A2MP01023 1474 aa11.16□□□□□ -0.62
COL4A6-210ENST00000621266 IGHDP01880 384 aa11.16□□□□□ -0.62
COL4A6-210ENST00000621266 IFIT1P09914 478 aaKnown RBP11.16□□□□□ -0.62
COL4A6-210ENST00000621266 CTTNBP2Q8WZ74 1663 aa11.16□□□□□ -0.62
COL4A6-210ENST00000621266 DISP3Q9P2K9 1392 aa11.16□□□□□ -0.62
COL4A6-210ENST00000621266 MRRFQ96E11 262 aaKnown RBP11.16□□□□□ -0.62
COL4A6-210ENST00000621266 SLC26A6Q9BXS9 759 aa11.16□□□□□ -0.62
COL4A6-210ENST00000621266 ATP2A1O14983 1001 aa11.16□□□□□ -0.62
COL4A6-210ENST00000621266 MRPS9P82933 396 aaKnown RBP11.16□□□□□ -0.62
COL4A6-210ENST00000621266 PPP1R7Q15435 360 aa11.16□□□□□ -0.62
COL4A6-210ENST00000621266 UAP1Q16222 522 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-210ENST00000621266 NKIRAS1Q9NYS0 192 aa11.16□□□□□ -0.62
COL4A6-210ENST00000621266 USH1CQ9Y6N9 552 aa11.16□□□□□ -0.62
COL4A6-210ENST00000621266 MARCKSP29966 332 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-210ENST00000621266 UBA7P41226 1012 aa11.16□□□□□ -0.62
COL4A6-210ENST00000621266 MYRIPQ8NFW9 859 aa11.16□□□□□ -0.62
COL4A6-210ENST00000621266 NUP153P49790 1475 aaKnown RBP11.16□□□□□ -0.62
COL4A6-210ENST00000621266 RMND1Q9NWS8 449 aa11.16□□□□□ -0.62
COL4A6-210ENST00000621266 IARSP41252 1262 aaKnown RBP11.15□□□□□ -0.62
COL4A6-210ENST00000621266 ARHGAP25P42331 645 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 ZNF365Q70YC5 407 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 RNF10Q8N5U6 811 aaKnown RBP11.15□□□□□ -0.62
COL4A6-210ENST00000621266 MCUR1Q96AQ8 359 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 ZSCAN16Q9H4T2 348 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-210ENST00000621266 CAPN7Q9Y6W3 813 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 ZNF518AQ6AHZ1 1483 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 UGGT2Q9NYU1 1516 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 EEF2P13639 858 aaKnown RBP11.15□□□□□ -0.62
COL4A6-210ENST00000621266 ALDH3A1P30838 453 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 TUBB4BP68371 445 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 GPR162Q16538 588 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 ZSCAN26Q16670 478 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms