RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 ARID4AP29374 1257 aaPredicted RBP13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 MCAMP43121 646 aa13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 EIF6P56537 245 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 RASGRF1Q13972 1273 aa13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 CCDC158Q5M9N0 1113 aa13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 CIAPIN1Q6FI81 312 aa13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 CENPQQ7L2Z9 268 aaPredicted RBP13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 SNRKQ9NRH2 765 aa13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 NDUFB9Q9Y6M9 179 aa13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 MYH7P12883 1935 aa13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 AK9Q5TCS8 1911 aa13.4□□□□□ -0.26
POLR2J3-221ENST00000621093 USP17L3A6NCW0 530 aa13.39□□□□□ -0.27
POLR2J3-221ENST00000621093 USP17L4A6NCW7 530 aa13.39□□□□□ -0.27
POLR2J3-221ENST00000621093 FRAT2O75474 233 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-221ENST00000621093 GRIK5Q16478 980 aa13.39□□□□□ -0.27
POLR2J3-221ENST00000621093 DACT2Q5SW24 774 aa13.39□□□□□ -0.27
POLR2J3-221ENST00000621093 TTLL5Q6EMB2 1281 aa13.39□□□□□ -0.27
POLR2J3-221ENST00000621093 USP17L1Q7RTZ2 530 aa13.39□□□□□ -0.27
POLR2J3-221ENST00000621093 CERS5Q8N5B7 392 aa13.39□□□□□ -0.27
POLR2J3-221ENST00000621093 GNL3LQ9NVN8 582 aaKnown RBP13.39□□□□□ -0.27
POLR2J3-221ENST00000621093 HMG20BQ9P0W2 317 aa13.39□□□□□ -0.27
POLR2J3-221ENST00000621093 WDR90Q96KV7 1748 aa13.39□□□□□ -0.27
POLR2J3-221ENST00000621093 FAM205AQ6ZU69 1335 aa13.39□□□□□ -0.27
POLR2J3-221ENST00000621093 SHTN1A0MZ66 631 aa13.38□□□□□ -0.27
POLR2J3-221ENST00000621093 VIL1P09327 827 aaKnown RBP13.38□□□□□ -0.27
POLR2J3-221ENST00000621093 UQCRFS1P1P0C7P4 283 aa13.38□□□□□ -0.27
POLR2J3-221ENST00000621093 GTF3C3Q9Y5Q9 886 aa13.38□□□□□ -0.27
POLR2J3-221ENST00000621093 MYH2Q9UKX2 1941 aa13.38□□□□□ -0.27
POLR2J3-221ENST00000621093 MX1P20591 662 aa13.37□□□□□ -0.27
POLR2J3-221ENST00000621093 ZAP70P43403 619 aa13.37□□□□□ -0.27
POLR2J3-221ENST00000621093 STRIP1Q5VSL9 837 aa13.37□□□□□ -0.27
POLR2J3-221ENST00000621093 TBC1D9Q6ZT07 1266 aa13.37□□□□□ -0.27
POLR2J3-221ENST00000621093 SPATA5Q8NB90 893 aa13.37□□□□□ -0.27
POLR2J3-221ENST00000621093 BOLA2Q9H3K6 86 aa13.37□□□□□ -0.27
POLR2J3-221ENST00000621093 ECHDC1Q9NTX5 307 aa13.37□□□□□ -0.27
POLR2J3-221ENST00000621093 DENND2AQ9ULE3 1009 aa13.37□□□□□ -0.27
POLR2J3-221ENST00000621093 MAST2Q6P0Q8 1798 aa13.37□□□□□ -0.27
POLR2J3-221ENST00000621093 ZC3H4Q9UPT8 1303 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-221ENST00000621093 SCN4AP35499 1836 aa13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 GLTPD2A6NH11 291 aa13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 SEMA3EO15041 775 aa13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 ATP5JP18859 108 aa13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 GMPSP49915 693 aaPredicted RBP13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 PDE1AP54750 535 aa13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 TNIP1Q15025 636 aa13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 RSBN1LQ6PCB5 846 aaPredicted RBP13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 PLEKHM2Q8IWE5 1019 aa13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 GPC2Q8N158 579 aa13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 PI4K2BQ8TCG2 481 aa13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 ZNF526Q8TF50 670 aaPredicted RBP13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 EDC3Q96F86 508 aaKnown RBP13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 ZNF512BQ96KM6 892 aaPredicted RBP13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 ANTXR1Q9H6X2 564 aa13.36□□□□□ -0.27
POLR2J3-221ENST00000621093 F8W031 263 aaPredicted RBP13.35□□□□□ -0.27
POLR2J3-221ENST00000621093 CYP2E1P05181 493 aaPredicted RBP13.35□□□□□ -0.27
POLR2J3-221ENST00000621093 MFSD14BQ5SR56 506 aa13.35□□□□□ -0.27
POLR2J3-221ENST00000621093 DPY19L2Q6NUT2 758 aa13.35□□□□□ -0.27
POLR2J3-221ENST00000621093 GMLQ99445 158 aa13.35□□□□□ -0.27
POLR2J3-221ENST00000621093 DNAJC2Q99543 621 aaKnown RBP13.35□□□□□ -0.27
POLR2J3-221ENST00000621093 ECM29Q5VYK3 1845 aa13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 POTECB2RU33 542 aa13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 ZBTB22O15209 634 aa13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 SCNN1DP51172 638 aa13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 KIAA0825Q8IV33 1275 aa13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 WDR66Q8TBY9 1149 aa13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 GPATCH3Q96I76 525 aa13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 PIH1D3Q9NQM4 214 aaKnown RBP13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 STAP2Q9UGK3 403 aa13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 PDS5AQ29RF7 1337 aaKnown RBP13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 TTC41PQ6P2S7 1318 aa13.34□□□□□ -0.27
POLR2J3-221ENST00000621093 GOLIM4O00461 696 aa13.33□□□□□ -0.28
POLR2J3-221ENST00000621093 PRDX5P30044 214 aa13.33□□□□□ -0.28
POLR2J3-221ENST00000621093 EPS15P42566 896 aa13.33□□□□□ -0.28
POLR2J3-221ENST00000621093 FKBP1AP62942 108 aaKnown RBP13.33□□□□□ -0.28
POLR2J3-221ENST00000621093 HAUS7Q99871 368 aa13.33□□□□□ -0.28
POLR2J3-221ENST00000621093 ABCF2Q9UG63 623 aa13.33□□□□□ -0.28
POLR2J3-221ENST00000621093 SALL1Q9NSC2 1324 aa13.33□□□□□ -0.28
POLR2J3-221ENST00000621093 UTRNP46939 3433 aa13.33□□□□□ -0.28
POLR2J3-221ENST00000621093 CDK5RAP2Q96SN8 1893 aa13.32□□□□□ -0.28
POLR2J3-221ENST00000621093 YY1P25490 414 aa13.32□□□□□ -0.28
POLR2J3-221ENST00000621093 MICALL2Q8IY33 904 aa13.32□□□□□ -0.28
POLR2J3-221ENST00000621093 AGBL3Q8NEM8 1001 aa13.32□□□□□ -0.28
POLR2J3-221ENST00000621093 TBC1D22AQ8WUA7 517 aa13.32□□□□□ -0.28
POLR2J3-221ENST00000621093 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
POLR2J3-221ENST00000621093 RRAGCQ9HB90 399 aa13.32□□□□□ -0.28
POLR2J3-221ENST00000621093 NMRK2Q9NPI5 230 aa13.32□□□□□ -0.28
POLR2J3-221ENST00000621093 GPRC5DQ9NZD1 345 aa13.32□□□□□ -0.28
POLR2J3-221ENST00000621093 CNOT7Q9UIV1 285 aaKnown RBP13.32□□□□□ -0.28
POLR2J3-221ENST00000621093 TTF2Q9UNY4 1162 aaKnown RBP13.32□□□□□ -0.28
POLR2J3-221ENST00000621093 PCDHAC2Q9Y5I4 1007 aa13.32□□□□□ -0.28
POLR2J3-221ENST00000621093 ERC2O15083 957 aa13.31□□□□□ -0.28
POLR2J3-221ENST00000621093 GLRX3O76003 335 aaKnown RBP13.31□□□□□ -0.28
POLR2J3-221ENST00000621093 EGFRP00533 1210 aa13.31□□□□□ -0.28
POLR2J3-221ENST00000621093 CHGBP05060 677 aa13.31□□□□□ -0.28
POLR2J3-221ENST00000621093 RPS12P25398 132 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms