RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 HSP90AA4PQ58FG1 418 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 SPTY2D1Q68D10 685 aaPredicted RBP9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 DHX37Q8IY37 1157 aaKnown RBP9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 MNS1Q8NEH6 495 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 CAGE1Q8TC20 777 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 MAP7D2Q96T17 732 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 RTCBQ9Y3I0 505 aaKnown RBP9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 TIMM10P62072 90 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 TYRO3Q06418 890 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 EPHA10Q5JZY3 1008 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 ZNF790Q6PG37 636 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 ANKRD18AQ8IVF6 992 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 SEC62Q99442 399 aaKnown RBP9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 CYP7A1P22680 504 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 SSR1P43307 286 aaKnown RBP9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 TFCP2Q12800 502 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 ARHGEF25Q86VW2 580 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 OGFOD1Q8N543 542 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 JMYQ8N9B5 988 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 SCAND2PQ9GZW5 306 aaPredicted RBP9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 SEC63Q9UGP8 760 aaKnown RBP9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 SP4Q02446 784 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 ATP2B3Q16720 1220 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 ANO6Q4KMQ2 910 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 NAT10Q9H0A0 1025 aaKnown RBP9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 SAMM50Q9Y512 469 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 NEURL1BA8MQ27 555 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 GCKRQ14397 625 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 SYCP1Q15431 976 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 FAM200AQ8TCP9 573 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 NEK1Q96PY6 1258 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 UIMC1Q96RL1 719 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 SLC12A7Q9Y666 1083 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 SLC9C2Q5TAH2 1124 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 Q6ZUG5 572 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 BRF1Q92994 677 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 LRRC37A3O60309 1634 aa9.57□□□□□ -0.88
PTPDC1-204ENST00000620992 PXDNQ92626 1479 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 RXRAP19793 462 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 PTGS1P23219 599 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 HMGN5P82970 282 aaKnown RBP9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 DEF6Q9H4E7 631 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 AP5Z1O43299 807 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 TNNT3P45378 269 aaPredicted RBP9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 ZNF496Q96IT1 587 aaPredicted RBP9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 C8orf76Q96K31 380 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 DBNDD2Q9BQY9 259 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 DNAJC5Q9H3Z4 198 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 BMP2KQ9NSY1 1161 aaPredicted RBP9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 SLAIN2Q9P270 581 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 PYCARDQ9ULZ3 195 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 USP16Q9Y5T5 823 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 NLRP5P59047 1200 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 TOB2Q14106 344 aaPredicted RBP9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 TMEM67Q5HYA8 995 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 CCDC70Q6NSX1 233 aa9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 DBNLQ9UJU6 430 aaKnown RBP9.56□□□□□ -0.88
PTPDC1-204ENST00000620992 TAF5LO75529 589 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 KRT32Q14532 448 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 PLS1Q14651 629 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 FILIP1LQ4L180 1135 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 MYRIPQ8NFW9 859 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 HMG20BQ9P0W2 317 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 GOLGA8AA7E2F4 631 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 TNNI3KQ59H18 835 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 FNBP4Q8N3X1 1017 aaPredicted RBP9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 LEO1Q8WVC0 666 aaPredicted RBP9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 VTI1AQ96AJ9 217 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 ZNF594Q96JF6 807 aaPredicted RBP9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 DNAJC25Q9H1X3 360 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 CCNL1Q9UK58 526 aaPredicted RBP9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 FPGT-TNNI3KV9GXZ4 949 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 ARHGAP23Q9P227 1491 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 ST5P78524 1137 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 TPTE2Q6XPS3 522 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 CCDC186Q7Z3E2 898 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 CPLX3Q8WVH0 158 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 FUCA2Q9BTY2 467 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 SLIT1O75093 1534 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 IRS4O14654 1257 aaPredicted RBP9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 NR1I2O75469 434 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 ZYXQ15942 572 aaKnown RBP9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 SLFNL1Q499Z3 407 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 CCDC152Q4G0S7 254 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 METTL22Q9BUU2 404 aaPredicted RBP9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 MRVI1Q9Y6F6 885 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 TUBGCP6Q96RT7 1819 aa9.55□□□□□ -0.88
PTPDC1-204ENST00000620992 ZNF165P49910 485 aa9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 EIF6P56537 245 aaKnown RBP9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 PDIA6Q15084 440 aa9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 MTERF4Q7Z6M4 381 aaKnown RBP9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 DNAJC10Q8IXB1 793 aa9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 ZBTB9Q96C00 473 aa9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 PRIMPOLQ96LW4 560 aa9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 CBX8Q9HC52 389 aa9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 PRDM10Q9NQV6 1147 aa9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 TNNT1P13805 278 aa9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 SLC52A2Q9HAB3 445 aa9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 CCDC194A0A1B0GVG4 234 aa9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 KCNB2Q92953 911 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms