RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 SIL1Q9H173 461 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 CEP126Q9P2H0 1117 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 TSC1Q92574 1164 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 MCUR1Q96AQ8 359 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 ANKRD30BQ9BXX2 1392 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 CUL7Q14999 1698 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 CCDC141Q6ZP82 1450 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 BICDL2A1A5D9 508 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 AMOTQ4VCS5 1084 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 CCDC144CPQ8IYA2 1237 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 PRPF31Q8WWY3 499 aaKnown RBP8.08□□□□□ -1.12
COLCA1-205ENST00000620864 CAPZA3Q96KX2 299 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 EXOC1Q9NV70 894 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 KDM2BQ8NHM5 1336 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 NDUFAB1O14561 156 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 PRKAR2BP31323 418 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 MTMR3Q13615 1198 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 ATL3Q6DD88 541 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 ERMNQ8TAM6 284 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 EFCAB5A4FU69 1503 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 GAS8O95995 478 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 RLBP1P12271 317 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 CCDC63Q8NA47 563 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 CWC27Q6UX04 472 aaKnown RBP8.08□□□□□ -1.12
COLCA1-205ENST00000620864 CNGA4Q8IV77 575 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 BICD1Q96G01 975 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 ADAMTS8Q9UP79 889 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 UHRF1BP1LA0JNW5 1464 aa8.08□□□□□ -1.12
COLCA1-205ENST00000620864 RAB11FIP4Q86YS3 637 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 DDX27Q96GQ7 796 aaKnown RBP8.07□□□□□ -1.12
COLCA1-205ENST00000620864 TMX1Q9H3N1 280 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 ERICH3Q5RHP9 1530 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 CETN3O15182 167 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 MYO1BO43795 1136 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 DBN1Q16643 649 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 TRMT1LQ7Z2T5 733 aaKnown RBP8.07□□□□□ -1.12
COLCA1-205ENST00000620864 CCDC24Q8N4L8 307 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 RPGRIP1Q96KN7 1286 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 TACC3Q9Y6A5 838 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 EXOSC9Q06265 439 aaKnown RBP8.07□□□□□ -1.12
COLCA1-205ENST00000620864 FLIIQ13045 1269 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 SLF2Q8IX21 1173 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 SLC12A7Q9Y666 1083 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 ZEB2O60315 1214 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 GCKP35557 465 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 HDGFL1Q5TGJ6 251 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 JDP2Q8WYK2 163 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 SERPINA10Q9UK55 444 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 LRRC9Q6ZRR7 1453 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 TTC36A6NLP5 189 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 PSMA7O14818 248 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 FCHSD2O94868 740 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 CATIPQ7Z7H3 387 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 BCS1LQ9Y276 419 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 ZMYM3Q14202 1370 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 GPTP24298 496 aa8.07□□□□□ -1.12
COLCA1-205ENST00000620864 MRPS9P82933 396 aaKnown RBP8.07□□□□□ -1.12
COLCA1-205ENST00000620864 MPHOSPH6Q99547 160 aaKnown RBP8.07□□□□□ -1.12
COLCA1-205ENST00000620864 PPP2R1AP30153 589 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 GKAP1Q5VSY0 366 aaPredicted RBP8.06□□□□□ -1.12
COLCA1-205ENST00000620864 SRGAP1Q7Z6B7 1085 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 IFT20Q8IY31 132 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 NKTRP30414 1462 aaKnown RBP8.06□□□□□ -1.12
COLCA1-205ENST00000620864 NBPF7P0C2Y1 421 aaPredicted RBP8.06□□□□□ -1.12
COLCA1-205ENST00000620864 SATB1Q01826 763 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 SMARCC2Q8TAQ2 1214 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 IQCDQ96DY2 449 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 EPSTI1Q96J88 318 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 TRIM47Q96LD4 638 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 ZC4H2Q9NQZ6 224 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 MAP10Q9P2G4 905 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 TSKSQ9UJT2 592 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 HFM1A2PYH4 1435 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 SLC4A2P04920 1241 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 UBA7P41226 1012 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 PDCD2Q16342 344 aaPredicted RBP8.06□□□□□ -1.12
COLCA1-205ENST00000620864 VWA3BQ502W6 1294 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.06□□□□□ -1.12
COLCA1-205ENST00000620864 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.06□□□□□ -1.12
COLCA1-205ENST00000620864 GOLGA6CA6NDK9 693 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 GOLGA6DP0CG33 693 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 SYT1P21579 422 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 NBPF6Q5VWK0 638 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 NBPF5PQ86XG9 351 aaPredicted RBP8.06□□□□□ -1.12
COLCA1-205ENST00000620864 DDX17Q92841 729 aaKnown RBP8.06□□□□□ -1.12
COLCA1-205ENST00000620864 NBPF4Q96M43 638 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 PPP1R12CQ9BZL4 782 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 TRIM4Q9C037 500 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 GOLGA6AQ9NYA3 693 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 SDCCAG8Q86SQ7 713 aaPredicted RBP8.06□□□□□ -1.12
COLCA1-205ENST00000620864 ZCRB1Q8TBF4 217 aaKnown RBP8.06□□□□□ -1.12
COLCA1-205ENST00000620864 WHAMMQ8TF30 809 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 CAVIN4Q5BKX8 364 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 GSTA5Q7RTV2 222 aa8.06□□□□□ -1.12
COLCA1-205ENST00000620864 RTCBQ9Y3I0 505 aaKnown RBP8.06□□□□□ -1.12
COLCA1-205ENST00000620864 SRGAP3O43295 1099 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 KRT13P13646 458 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 RPAINQ86UA6 219 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 CCT6BQ92526 530 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 MKNK2Q9HBH9 465 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms