RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FBXW7Q969H0 707 aa16.73■□□□□ 0.27
NEK3-210ENST00000620675 ADAMTSL1Q8N6G6 1762 aa16.73■□□□□ 0.27
NEK3-210ENST00000620675 CENPQQ7L2Z9 268 aaPredicted RBP16.73■□□□□ 0.27
NEK3-210ENST00000620675 PODNQ7Z5L7 613 aa16.73■□□□□ 0.27
NEK3-210ENST00000620675 ZBTB12Q9Y330 459 aaPredicted RBP16.73■□□□□ 0.27
NEK3-210ENST00000620675 ARID4AP29374 1257 aaPredicted RBP16.72■□□□□ 0.27
NEK3-210ENST00000620675 CERS5Q8N5B7 392 aa16.72■□□□□ 0.27
NEK3-210ENST00000620675 DDNO94850 711 aaPredicted RBP16.71■□□□□ 0.27
NEK3-210ENST00000620675 TTC39AQ5SRH9 613 aa16.71■□□□□ 0.27
NEK3-210ENST00000620675 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.27
NEK3-210ENST00000620675 HMG20BQ9P0W2 317 aa16.71■□□□□ 0.27
NEK3-210ENST00000620675 SHTN1A0MZ66 631 aa16.71■□□□□ 0.27
NEK3-210ENST00000620675 FRAT2O75474 233 aaPredicted RBP16.71■□□□□ 0.27
NEK3-210ENST00000620675 DACT2Q5SW24 774 aa16.71■□□□□ 0.27
NEK3-210ENST00000620675 EDC3Q96F86 508 aaKnown RBP16.71■□□□□ 0.27
NEK3-210ENST00000620675 GJA3Q9Y6H8 435 aa16.71■□□□□ 0.27
NEK3-210ENST00000620675 CCDC158Q5M9N0 1113 aa16.7■□□□□ 0.26
NEK3-210ENST00000620675 BOLA2Q9H3K6 86 aa16.7■□□□□ 0.26
NEK3-210ENST00000620675 USP17L3A6NCW0 530 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 USP17L4A6NCW7 530 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 CIAPIN1Q6FI81 312 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 TBC1D9Q6ZT07 1266 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 USP17L1Q7RTZ2 530 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 PLEKHM2Q8IWE5 1019 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 DOCK2Q92608 1830 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 MYH7P12883 1935 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 AK9Q5TCS8 1911 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 MX1P20591 662 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 ZAP70P43403 619 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 EIF6P56537 245 aaKnown RBP16.69■□□□□ 0.26
NEK3-210ENST00000620675 PI4K2BQ8TCG2 481 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 ANTXR1Q9H6X2 564 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 ZBTB47Q9UFB7 747 aaPredicted RBP16.69■□□□□ 0.26
NEK3-210ENST00000620675 MYH2Q9UKX2 1941 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 FAM205AQ6ZU69 1335 aa16.69■□□□□ 0.26
NEK3-210ENST00000620675 VIL1P09327 827 aaKnown RBP16.68■□□□□ 0.26
NEK3-210ENST00000620675 PDE1AP54750 535 aa16.68■□□□□ 0.26
NEK3-210ENST00000620675 SPATA5Q8NB90 893 aa16.68■□□□□ 0.26
NEK3-210ENST00000620675 MAP4K4O95819 1239 aaPredicted RBP16.68■□□□□ 0.26
NEK3-210ENST00000620675 CYP2E1P05181 493 aaPredicted RBP16.68■□□□□ 0.26
NEK3-210ENST00000620675 STRIP1Q5VSL9 837 aa16.68■□□□□ 0.26
NEK3-210ENST00000620675 ECHDC1Q9NTX5 307 aa16.68■□□□□ 0.26
NEK3-210ENST00000620675 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
NEK3-210ENST00000620675 POLR2AP24928 1970 aaKnown RBP16.67■□□□□ 0.26
NEK3-210ENST00000620675 MFSD14BQ5SR56 506 aa16.67■□□□□ 0.26
NEK3-210ENST00000620675 ZNF526Q8TF50 670 aaPredicted RBP16.67■□□□□ 0.26
NEK3-210ENST00000620675 UQCRFS1P1P0C7P4 283 aa16.66■□□□□ 0.26
NEK3-210ENST00000620675 ATP5JP18859 108 aa16.66■□□□□ 0.26
NEK3-210ENST00000620675 PRDX5P30044 214 aa16.66■□□□□ 0.26
NEK3-210ENST00000620675 GMPSP49915 693 aaPredicted RBP16.66■□□□□ 0.26
NEK3-210ENST00000620675 RSBN1LQ6PCB5 846 aaPredicted RBP16.66■□□□□ 0.26
NEK3-210ENST00000620675 ZNF512BQ96KM6 892 aaPredicted RBP16.66■□□□□ 0.26
NEK3-210ENST00000620675 GMLQ99445 158 aa16.66■□□□□ 0.26
NEK3-210ENST00000620675 DNAJC2Q99543 621 aaKnown RBP16.66■□□□□ 0.26
NEK3-210ENST00000620675 DENND2AQ9ULE3 1009 aa16.66■□□□□ 0.26
NEK3-210ENST00000620675 GLTPD2A6NH11 291 aa16.66■□□□□ 0.26
NEK3-210ENST00000620675 F8W031 263 aaPredicted RBP16.66■□□□□ 0.26
NEK3-210ENST00000620675 PIH1D3Q9NQM4 214 aaKnown RBP16.66■□□□□ 0.26
NEK3-210ENST00000620675 STAP2Q9UGK3 403 aa16.66■□□□□ 0.26
NEK3-210ENST00000620675 CHGBP05060 677 aa16.65■□□□□ 0.26
NEK3-210ENST00000620675 SCNN1DP51172 638 aa16.65■□□□□ 0.26
NEK3-210ENST00000620675 KIAA0825Q8IV33 1275 aa16.65■□□□□ 0.26
NEK3-210ENST00000620675 GPC2Q8N158 579 aa16.65■□□□□ 0.26
NEK3-210ENST00000620675 PCDHAC2Q9Y5I4 1007 aa16.65■□□□□ 0.26
NEK3-210ENST00000620675 POTECB2RU33 542 aa16.65■□□□□ 0.26
NEK3-210ENST00000620675 SEMA3EO15041 775 aa16.65■□□□□ 0.26
NEK3-210ENST00000620675 EGFRP00533 1210 aa16.65■□□□□ 0.26
NEK3-210ENST00000620675 TNIP1Q15025 636 aa16.65■□□□□ 0.26
NEK3-210ENST00000620675 ZNF384Q8TF68 577 aa16.65■□□□□ 0.26
NEK3-210ENST00000620675 ABCF2Q9UG63 623 aa16.65■□□□□ 0.26
NEK3-210ENST00000620675 ZC3H4Q9UPT8 1303 aaKnown RBP16.64■□□□□ 0.26
NEK3-210ENST00000620675 WDR90Q96KV7 1748 aa16.64■□□□□ 0.25
NEK3-210ENST00000620675 GOLIM4O00461 696 aa16.64■□□□□ 0.25
NEK3-210ENST00000620675 HAUS7Q99871 368 aa16.64■□□□□ 0.25
NEK3-210ENST00000620675 TTC41PQ6P2S7 1318 aa16.64■□□□□ 0.25
NEK3-210ENST00000620675 SCN4AP35499 1836 aa16.63■□□□□ 0.25
NEK3-210ENST00000620675 EPS15P42566 896 aa16.63■□□□□ 0.25
NEK3-210ENST00000620675 RGS3P49796 1198 aa16.63■□□□□ 0.25
NEK3-210ENST00000620675 SLFNL1Q499Z3 407 aa16.63■□□□□ 0.25
NEK3-210ENST00000620675 WDR66Q8TBY9 1149 aa16.63■□□□□ 0.25
NEK3-210ENST00000620675 DPY19L2Q6NUT2 758 aa16.62■□□□□ 0.25
NEK3-210ENST00000620675 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.62■□□□□ 0.25
NEK3-210ENST00000620675 GPATCH3Q96I76 525 aa16.62■□□□□ 0.25
NEK3-210ENST00000620675 NMRK2Q9NPI5 230 aa16.62■□□□□ 0.25
NEK3-210ENST00000620675 AOX1Q06278 1338 aa16.62■□□□□ 0.25
NEK3-210ENST00000620675 PDS5AQ29RF7 1337 aaKnown RBP16.62■□□□□ 0.25
NEK3-210ENST00000620675 ZBTB22O15209 634 aa16.61■□□□□ 0.25
NEK3-210ENST00000620675 DIXDC1Q155Q3 683 aa16.61■□□□□ 0.25
NEK3-210ENST00000620675 OSBPL3Q9H4L5 887 aa16.61■□□□□ 0.25
NEK3-210ENST00000620675 PAG1Q9NWQ8 432 aa16.61■□□□□ 0.25
NEK3-210ENST00000620675 SALL1Q9NSC2 1324 aa16.61■□□□□ 0.25
NEK3-210ENST00000620675 GSPT1P15170 499 aaKnown RBP16.61■□□□□ 0.25
NEK3-210ENST00000620675 MAST2Q6P0Q8 1798 aa16.61■□□□□ 0.25
NEK3-210ENST00000620675 MICALL2Q8IY33 904 aa16.61■□□□□ 0.25
NEK3-210ENST00000620675 AGBL3Q8NEM8 1001 aa16.61■□□□□ 0.25
NEK3-210ENST00000620675 GPRC5DQ9NZD1 345 aa16.61■□□□□ 0.25
NEK3-210ENST00000620675 CNOT7Q9UIV1 285 aaKnown RBP16.61■□□□□ 0.25
NEK3-210ENST00000620675 TTF2Q9UNY4 1162 aaKnown RBP16.61■□□□□ 0.25
NEK3-210ENST00000620675 GLRX3O76003 335 aaKnown RBP16.6■□□□□ 0.25
NEK3-210ENST00000620675 SAMD7Q7Z3H4 446 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms