RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 H2AFB2P0C5Z0 115 aa10.97□□□□□ -0.65
CBWD1-228ENST00000619157 HIRAP54198 1017 aaPredicted RBP10.97□□□□□ -0.65
CBWD1-228ENST00000619157 RAC1P63000 192 aa10.97□□□□□ -0.65
CBWD1-228ENST00000619157 TP53INP1Q96A56 240 aa10.97□□□□□ -0.65
CBWD1-228ENST00000619157 POM121Q96HA1 1249 aa10.97□□□□□ -0.65
CBWD1-228ENST00000619157 ROBO2Q9HCK4 1378 aa10.97□□□□□ -0.65
CBWD1-228ENST00000619157 NCOA3Q9Y6Q9 1424 aa10.97□□□□□ -0.65
CBWD1-228ENST00000619157 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.96□□□□□ -0.65
CBWD1-228ENST00000619157 FAM135BQ49AJ0 1406 aa10.96□□□□□ -0.65
CBWD1-228ENST00000619157 TSEN2Q8NCE0 465 aaKnown RBP10.96□□□□□ -0.65
CBWD1-228ENST00000619157 USP21Q9UK80 565 aa10.96□□□□□ -0.65
CBWD1-228ENST00000619157 MYOM2P54296 1465 aa10.95□□□□□ -0.66
CBWD1-228ENST00000619157 PTCH1Q13635 1447 aa10.95□□□□□ -0.66
CBWD1-228ENST00000619157 MSH6P52701 1360 aa10.95□□□□□ -0.66
CBWD1-228ENST00000619157 DHX57Q6P158 1386 aaKnown RBP10.95□□□□□ -0.66
CBWD1-228ENST00000619157 USP17L3A6NCW0 530 aa10.95□□□□□ -0.66
CBWD1-228ENST00000619157 USP17L4A6NCW7 530 aa10.95□□□□□ -0.66
CBWD1-228ENST00000619157 LRP8Q14114 963 aa10.95□□□□□ -0.66
CBWD1-228ENST00000619157 USP17L2Q6R6M4 530 aa10.95□□□□□ -0.66
CBWD1-228ENST00000619157 USP17L1Q7RTZ2 530 aa10.95□□□□□ -0.66
CBWD1-228ENST00000619157 LENG1Q96BZ8 264 aaPredicted RBP10.95□□□□□ -0.66
CBWD1-228ENST00000619157 NAGPAQ9UK23 515 aa10.95□□□□□ -0.66
CBWD1-228ENST00000619157 ROBO1Q9Y6N7 1651 aa10.95□□□□□ -0.66
CBWD1-228ENST00000619157 PPP1R12BO60237 982 aaPredicted RBP10.94□□□□□ -0.66
CBWD1-228ENST00000619157 PSAPL1Q6NUJ1 521 aa10.94□□□□□ -0.66
CBWD1-228ENST00000619157 BTLAQ7Z6A9 289 aa10.94□□□□□ -0.66
CBWD1-228ENST00000619157 DMRTC2Q8IXT2 367 aaPredicted RBP10.94□□□□□ -0.66
CBWD1-228ENST00000619157 NGLY1Q96IV0 654 aa10.94□□□□□ -0.66
CBWD1-228ENST00000619157 NALCNQ8IZF0 1738 aa10.94□□□□□ -0.66
CBWD1-228ENST00000619157 POM121CA8CG34 1229 aa10.93□□□□□ -0.66
CBWD1-228ENST00000619157 ATP1A2P50993 1020 aa10.93□□□□□ -0.66
CBWD1-228ENST00000619157 AFF1P51825 1210 aaKnown RBP10.93□□□□□ -0.66
CBWD1-228ENST00000619157 TPRNQ4KMQ1 711 aa10.93□□□□□ -0.66
CBWD1-228ENST00000619157 POTEAQ6S8J7 498 aa10.93□□□□□ -0.66
CBWD1-228ENST00000619157 ADAMTS19Q8TE59 1207 aa10.93□□□□□ -0.66
CBWD1-228ENST00000619157 ZNF594Q96JF6 807 aaPredicted RBP10.93□□□□□ -0.66
CBWD1-228ENST00000619157 KRTAP4-12Q9BQ66 201 aa10.93□□□□□ -0.66
CBWD1-228ENST00000619157 DNAJB12Q9NXW2 375 aaKnown RBP10.93□□□□□ -0.66
CBWD1-228ENST00000619157 SLAIN2Q9P270 581 aa10.93□□□□□ -0.66
CBWD1-228ENST00000619157 ADGRL3Q9HAR2 1447 aa10.92□□□□□ -0.66
CBWD1-228ENST00000619157 NRG1Q02297 640 aaPredicted RBP10.92□□□□□ -0.66
CBWD1-228ENST00000619157 LCE3BQ5TA77 95 aa10.92□□□□□ -0.66
CBWD1-228ENST00000619157 TMEM132EQ6IEE7 984 aa10.92□□□□□ -0.66
CBWD1-228ENST00000619157 ALDH16A1Q8IZ83 802 aa10.92□□□□□ -0.66
CBWD1-228ENST00000619157 FMR1NBQ8N0W7 255 aaPredicted RBP10.92□□□□□ -0.66
CBWD1-228ENST00000619157 OGFOD1Q8N543 542 aa10.92□□□□□ -0.66
CBWD1-228ENST00000619157 C19orf44Q9H6X5 657 aa10.92□□□□□ -0.66
CBWD1-228ENST00000619157 TECPR2O15040 1411 aa10.92□□□□□ -0.66
CBWD1-228ENST00000619157 DCCP43146 1447 aa10.92□□□□□ -0.66
CBWD1-228ENST00000619157 MST1RQ04912 1400 aa10.92□□□□□ -0.66
CBWD1-228ENST00000619157 HYAL3O43820 417 aaPredicted RBP10.91□□□□□ -0.66
CBWD1-228ENST00000619157 C21orf2O43822 256 aa10.91□□□□□ -0.66
CBWD1-228ENST00000619157 CFAP70Q5T0N1 1121 aa10.91□□□□□ -0.66
CBWD1-228ENST00000619157 C14orf93Q9H972 538 aaKnown RBP10.91□□□□□ -0.66
CBWD1-228ENST00000619157 LRPPRCP42704 1394 aaKnown RBP10.9□□□□□ -0.66
CBWD1-228ENST00000619157 PLEKHH1Q9ULM0 1364 aa10.9□□□□□ -0.66
CBWD1-228ENST00000619157 ADGRB1O14514 1584 aa10.9□□□□□ -0.66
CBWD1-228ENST00000619157 NFKB1P19838 968 aa10.9□□□□□ -0.66
CBWD1-228ENST00000619157 PLEKHM2Q8IWE5 1019 aa10.9□□□□□ -0.66
CBWD1-228ENST00000619157 WWC1Q8IX03 1113 aa10.9□□□□□ -0.66
CBWD1-228ENST00000619157 PNMA5Q96PV4 448 aa10.9□□□□□ -0.66
CBWD1-228ENST00000619157 UCN2Q96RP3 112 aa10.9□□□□□ -0.66
CBWD1-228ENST00000619157 WAPLQ7Z5K2 1190 aa10.89□□□□□ -0.67
CBWD1-228ENST00000619157 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
CBWD1-228ENST00000619157 YTHDC2Q9H6S0 1430 aaKnown RBP10.89□□□□□ -0.67
CBWD1-228ENST00000619157 MED1Q15648 1581 aaPredicted RBP10.89□□□□□ -0.67
CBWD1-228ENST00000619157 KNDC1Q76NI1 1749 aa10.89□□□□□ -0.67
CBWD1-228ENST00000619157 ABCC11Q96J66 1382 aa10.89□□□□□ -0.67
CBWD1-228ENST00000619157 COL16A1Q07092 1604 aaPredicted RBP10.88□□□□□ -0.67
CBWD1-228ENST00000619157 RGS9O75916 674 aaPredicted RBP10.88□□□□□ -0.67
CBWD1-228ENST00000619157 BRINP3Q76B58 766 aa10.88□□□□□ -0.67
CBWD1-228ENST00000619157 SSBP4Q9BWG4 385 aaPredicted RBP10.88□□□□□ -0.67
CBWD1-228ENST00000619157 GSX2Q9BZM3 304 aa10.88□□□□□ -0.67
CBWD1-228ENST00000619157 STK26Q9P289 416 aa10.88□□□□□ -0.67
CBWD1-228ENST00000619157 MKRN1Q9UHC7 482 aaKnown RBP10.88□□□□□ -0.67
CBWD1-228ENST00000619157 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.88□□□□□ -0.67
CBWD1-228ENST00000619157 PALM3A6NDB9 673 aaPredicted RBP10.87□□□□□ -0.67
CBWD1-228ENST00000619157 ATF3P18847 181 aa10.87□□□□□ -0.67
CBWD1-228ENST00000619157 LARGE2Q8N3Y3 721 aa10.87□□□□□ -0.67
CBWD1-228ENST00000619157 DCAF11Q8TEB1 546 aa10.87□□□□□ -0.67
CBWD1-228ENST00000619157 SCG3Q8WXD2 468 aaKnown RBP10.87□□□□□ -0.67
CBWD1-228ENST00000619157 DISP3Q9P2K9 1392 aa10.87□□□□□ -0.67
CBWD1-228ENST00000619157 LAMC1P11047 1609 aa10.87□□□□□ -0.67
CBWD1-228ENST00000619157 AHDC1Q5TGY3 1603 aaPredicted RBP10.87□□□□□ -0.67
CBWD1-228ENST00000619157 M0R2N6 131 aa10.86□□□□□ -0.67
CBWD1-228ENST00000619157 CPB1P15086 417 aa10.86□□□□□ -0.67
CBWD1-228ENST00000619157 ILDR2Q71H61 639 aa10.86□□□□□ -0.67
CBWD1-228ENST00000619157 SIN3AQ96ST3 1273 aa10.86□□□□□ -0.67
CBWD1-228ENST00000619157 C2orf49Q9BVC5 232 aaPredicted RBP10.86□□□□□ -0.67
CBWD1-228ENST00000619157 ATAD2Q6PL18 1390 aa10.86□□□□□ -0.67
CBWD1-228ENST00000619157 C1orf167Q5SNV9 1468 aa10.86□□□□□ -0.67
CBWD1-228ENST00000619157 CDC42BPGQ6DT37 1551 aa10.86□□□□□ -0.67
CBWD1-228ENST00000619157 PHLPP1O60346 1717 aa10.85□□□□□ -0.67
CBWD1-228ENST00000619157 ATP9BO43861 1147 aa10.85□□□□□ -0.67
CBWD1-228ENST00000619157 LGR5O75473 907 aa10.85□□□□□ -0.67
CBWD1-228ENST00000619157 TRIM26Q12899 539 aaPredicted RBP10.85□□□□□ -0.67
CBWD1-228ENST00000619157 FAM35AQ86V20 835 aa10.85□□□□□ -0.67
CBWD1-228ENST00000619157 SIX5Q8N196 739 aa10.85□□□□□ -0.67
CBWD1-228ENST00000619157 DDX17Q92841 729 aaKnown RBP10.85□□□□□ -0.67
CBWD1-228ENST00000619157 NHSL1Q5SYE7 1610 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms