RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 C1orf115Q9H7X2 142 aa10.26□□□□□ -0.77
NEK3-209ENST00000618856 CEP126Q9P2H0 1117 aa10.26□□□□□ -0.77
NEK3-209ENST00000618856 COG6Q9Y2V7 657 aa10.26□□□□□ -0.77
NEK3-209ENST00000618856 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.26□□□□□ -0.77
NEK3-209ENST00000618856 IFIT1P09914 478 aaKnown RBP10.25□□□□□ -0.77
NEK3-209ENST00000618856 BCAMP50895 628 aa10.25□□□□□ -0.77
NEK3-209ENST00000618856 EAPPQ56P03 285 aaPredicted RBP10.25□□□□□ -0.77
NEK3-209ENST00000618856 MAP1SQ66K74 1059 aaPredicted RBP10.25□□□□□ -0.77
NEK3-209ENST00000618856 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
NEK3-209ENST00000618856 SIRT2Q8IXJ6 389 aa10.25□□□□□ -0.77
NEK3-209ENST00000618856 CNTROBQ8N137 903 aa10.25□□□□□ -0.77
NEK3-209ENST00000618856 DNAJC5GQ8N7S2 189 aa10.25□□□□□ -0.77
NEK3-209ENST00000618856 MYOZ2Q9NPC6 264 aa10.25□□□□□ -0.77
NEK3-209ENST00000618856 GPR108Q9NPR9 543 aa10.25□□□□□ -0.77
NEK3-209ENST00000618856 SLC5A1P13866 664 aa10.24□□□□□ -0.77
NEK3-209ENST00000618856 TFCP2Q12800 502 aa10.24□□□□□ -0.77
NEK3-209ENST00000618856 ATP2B3Q16720 1220 aa10.24□□□□□ -0.77
NEK3-209ENST00000618856 CAVIN4Q5BKX8 364 aa10.24□□□□□ -0.77
NEK3-209ENST00000618856 RPAP2Q8IXW5 612 aaPredicted RBP10.24□□□□□ -0.77
NEK3-209ENST00000618856 YTHDC1Q96MU7 727 aaKnown RBP10.24□□□□□ -0.77
NEK3-209ENST00000618856 CHMP4BQ9H444 224 aaKnown RBP10.24□□□□□ -0.77
NEK3-209ENST00000618856 COL1A1P02452 1464 aaPredicted RBP10.23□□□□□ -0.77
NEK3-209ENST00000618856 SEMA3EO15041 775 aa10.23□□□□□ -0.77
NEK3-209ENST00000618856 RRP1P56182 461 aaKnown RBP10.23□□□□□ -0.77
NEK3-209ENST00000618856 KIF4BQ2VIQ3 1234 aa10.23□□□□□ -0.77
NEK3-209ENST00000618856 TBC1D10BQ4KMP7 808 aaPredicted RBP10.23□□□□□ -0.77
NEK3-209ENST00000618856 MRIQ9BWK5 157 aa10.23□□□□□ -0.77
NEK3-209ENST00000618856 AKAP2Q9Y2D5 859 aa10.23□□□□□ -0.77
NEK3-209ENST00000618856 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
NEK3-209ENST00000618856 PDS5AQ29RF7 1337 aaKnown RBP10.23□□□□□ -0.77
NEK3-209ENST00000618856 PITPNM2Q9BZ72 1349 aa10.23□□□□□ -0.77
NEK3-209ENST00000618856 PCNTO95613 3336 aa10.23□□□□□ -0.77
NEK3-209ENST00000618856 A0A1B0GUL7 405 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 WNT10BO00744 389 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 ADORA1P30542 326 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 TIMM10P62072 90 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 G3BP1Q13283 466 aaKnown RBP eCLIP10.22□□□□□ -0.77
NEK3-209ENST00000618856 SCARF1Q14162 830 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 CCDC102BQ68D86 513 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 CDC37L1Q7L3B6 337 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 OGFOD1Q8N543 542 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 TBC1D22AQ8WUA7 517 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 CREBZFQ9NS37 354 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 CLEC11AQ9Y240 323 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 SUGT1Q9Y2Z0 365 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 ASTN2O75129 1339 aaPredicted RBP10.22□□□□□ -0.77
NEK3-209ENST00000618856 SALL1Q9NSC2 1324 aa10.22□□□□□ -0.77
NEK3-209ENST00000618856 SURF6O75683 361 aaKnown RBP10.21□□□□□ -0.77
NEK3-209ENST00000618856 PHKA1P46020 1223 aa10.21□□□□□ -0.77
NEK3-209ENST00000618856 HDLBPQ00341 1268 aaKnown RBP10.21□□□□□ -0.77
NEK3-209ENST00000618856 GRIK5Q16478 980 aa10.21□□□□□ -0.77
NEK3-209ENST00000618856 NBPF9Q3BBW0 867 aa10.21□□□□□ -0.77
NEK3-209ENST00000618856 MFSD14BQ5SR56 506 aa10.21□□□□□ -0.77
NEK3-209ENST00000618856 CST9Q5W186 159 aa10.21□□□□□ -0.77
NEK3-209ENST00000618856 KIAA0825Q8IV33 1275 aa10.21□□□□□ -0.77
NEK3-209ENST00000618856 XAGE2Q96GT9 111 aa10.21□□□□□ -0.77
NEK3-209ENST00000618856 SERPINA10Q9UK55 444 aa10.21□□□□□ -0.77
NEK3-209ENST00000618856 SPDYE2BA6NHP3 402 aa10.2□□□□□ -0.78
NEK3-209ENST00000618856 TMEM88BA6NKF7 163 aa10.2□□□□□ -0.78
NEK3-209ENST00000618856 TRAF5O00463 557 aa10.2□□□□□ -0.78
NEK3-209ENST00000618856 SPDYE6P0CI01 402 aa10.2□□□□□ -0.78
NEK3-209ENST00000618856 ARID4AP29374 1257 aaPredicted RBP10.2□□□□□ -0.78
NEK3-209ENST00000618856 FMR1Q06787 632 aaKnown RBP eCLIP10.2□□□□□ -0.78
NEK3-209ENST00000618856 TNNI3KQ59H18 835 aa10.2□□□□□ -0.78
NEK3-209ENST00000618856 VPS37DQ86XT2 251 aa10.2□□□□□ -0.78
NEK3-209ENST00000618856 WDR66Q8TBY9 1149 aa10.2□□□□□ -0.78
NEK3-209ENST00000618856 ZNF512BQ96KM6 892 aaPredicted RBP10.2□□□□□ -0.78
NEK3-209ENST00000618856 GLIS2Q9BZE0 524 aaPredicted RBP10.2□□□□□ -0.78
NEK3-209ENST00000618856 HDAC9Q9UKV0 1011 aa10.2□□□□□ -0.78
NEK3-209ENST00000618856 JAG2Q9Y219 1238 aa10.2□□□□□ -0.78
NEK3-209ENST00000618856 FPGT-TNNI3KV9GXZ4 949 aa10.2□□□□□ -0.78
NEK3-209ENST00000618856 TRPM7Q96QT4 1865 aa10.19□□□□□ -0.78
NEK3-209ENST00000618856 ECM29Q5VYK3 1845 aa10.19□□□□□ -0.78
NEK3-209ENST00000618856 HTRA3P83110 453 aa10.19□□□□□ -0.78
NEK3-209ENST00000618856 RASGRF1Q13972 1273 aa10.19□□□□□ -0.78
NEK3-209ENST00000618856 RBM26Q5T8P6 1007 aaKnown RBP10.19□□□□□ -0.78
NEK3-209ENST00000618856 ANGEL2Q5VTE6 544 aaKnown RBP10.19□□□□□ -0.78
NEK3-209ENST00000618856 USP48Q86UV5 1035 aa10.19□□□□□ -0.78
NEK3-209ENST00000618856 ERC1Q8IUD2 1116 aa10.19□□□□□ -0.78
NEK3-209ENST00000618856 FBXW7Q969H0 707 aa10.19□□□□□ -0.78
NEK3-209ENST00000618856 EAF2Q96CJ1 260 aaPredicted RBP10.19□□□□□ -0.78
NEK3-209ENST00000618856 PRMT6Q96LA8 375 aaPredicted RBP10.19□□□□□ -0.78
NEK3-209ENST00000618856 GNL3LQ9NVN8 582 aaKnown RBP10.19□□□□□ -0.78
NEK3-209ENST00000618856 GGA3Q9NZ52 723 aa10.19□□□□□ -0.78
NEK3-209ENST00000618856 DENND2AQ9ULE3 1009 aa10.19□□□□□ -0.78
NEK3-209ENST00000618856 IQSEC3Q9UPP2 1182 aaPredicted RBP10.19□□□□□ -0.78
NEK3-209ENST00000618856 AOX1Q06278 1338 aa10.18□□□□□ -0.78
NEK3-209ENST00000618856 POLR2AP24928 1970 aaKnown RBP10.18□□□□□ -0.78
NEK3-209ENST00000618856 MYH13Q9UKX3 1938 aa10.18□□□□□ -0.78
NEK3-209ENST00000618856 RASSF10A6NK89 507 aa10.18□□□□□ -0.78
NEK3-209ENST00000618856 HMMRO75330 724 aa10.18□□□□□ -0.78
NEK3-209ENST00000618856 CFAP100Q494V2 611 aa10.18□□□□□ -0.78
NEK3-209ENST00000618856 HSP90AB4PQ58FF6 505 aa10.18□□□□□ -0.78
NEK3-209ENST00000618856 HHIPL2Q6UWX4 724 aa10.18□□□□□ -0.78
NEK3-209ENST00000618856 KRT26Q7Z3Y9 468 aa10.18□□□□□ -0.78
NEK3-209ENST00000618856 JMYQ8N9B5 988 aa10.18□□□□□ -0.78
NEK3-209ENST00000618856 DCPSQ96C86 337 aaKnown RBP10.18□□□□□ -0.78
NEK3-209ENST00000618856 KLRG1Q96E93 195 aa10.18□□□□□ -0.78
NEK3-209ENST00000618856 HHIPL1Q96JK4 782 aa10.18□□□□□ -0.78
NEK3-209ENST00000618856 HMG20BQ9P0W2 317 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms