RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 ZNF644Q9H582 1327 aaPredicted RBP16.31■□□□□ 0.2
PTPN9-206ENST00000618819 SESN3P58005 492 aa16.31■□□□□ 0.2
PTPN9-206ENST00000618819 HEATR3Q7Z4Q2 680 aa16.31■□□□□ 0.2
PTPN9-206ENST00000618819 FAF1Q9UNN5 650 aaPredicted RBP16.31■□□□□ 0.2
PTPN9-206ENST00000618819 F13A1P00488 732 aa16.31■□□□□ 0.2
PTPN9-206ENST00000618819 PLIN2Q99541 437 aa16.31■□□□□ 0.2
PTPN9-206ENST00000618819 NAA16Q6N069 864 aaPredicted RBP16.31■□□□□ 0.2
PTPN9-206ENST00000618819 RRAGDQ9NQL2 400 aaPredicted RBP16.31■□□□□ 0.2
PTPN9-206ENST00000618819 PTCD1O75127 700 aaKnown RBP16.3■□□□□ 0.2
PTPN9-206ENST00000618819 MX2P20592 715 aa16.3■□□□□ 0.2
PTPN9-206ENST00000618819 GPR161Q8N6U8 529 aaKnown RBP16.3■□□□□ 0.2
PTPN9-206ENST00000618819 TRIM4Q9C037 500 aa16.3■□□□□ 0.2
PTPN9-206ENST00000618819 NUTM2BA6NNL0 878 aaPredicted RBP16.3■□□□□ 0.2
PTPN9-206ENST00000618819 NUTM2EB1AL46 878 aaPredicted RBP16.3■□□□□ 0.2
PTPN9-206ENST00000618819 WDHD1O75717 1129 aaPredicted RBP16.3■□□□□ 0.2
PTPN9-206ENST00000618819 TTLL12Q14166 644 aaPredicted RBP16.3■□□□□ 0.2
PTPN9-206ENST00000618819 NUTM2AQ8IVF1 878 aaPredicted RBP16.3■□□□□ 0.2
PTPN9-206ENST00000618819 PLEKHA4Q9H4M7 779 aa16.3■□□□□ 0.2
PTPN9-206ENST00000618819 PPP2R5DQ14738 602 aa16.3■□□□□ 0.2
PTPN9-206ENST00000618819 PDCD7Q8N8D1 485 aaKnown RBP16.3■□□□□ 0.2
PTPN9-206ENST00000618819 ERMNQ8TAM6 284 aa16.3■□□□□ 0.2
PTPN9-206ENST00000618819 LONRF3Q496Y0 759 aa16.3■□□□□ 0.2
PTPN9-206ENST00000618819 TTC22Q5TAA0 569 aa16.3■□□□□ 0.2
PTPN9-206ENST00000618819 AGTPBP1Q9UPW5 1226 aa16.3■□□□□ 0.2
PTPN9-206ENST00000618819 UTP11Q9Y3A2 253 aaKnown RBP16.3■□□□□ 0.2
PTPN9-206ENST00000618819 GOLGA6BA6NDN3 693 aa16.29■□□□□ 0.2
PTPN9-206ENST00000618819 IGHDP01880 384 aa16.29■□□□□ 0.2
PTPN9-206ENST00000618819 VPS41P49754 854 aa16.29■□□□□ 0.2
PTPN9-206ENST00000618819 USP37Q86T82 979 aa16.29■□□□□ 0.2
PTPN9-206ENST00000618819 NAPGQ99747 312 aaPredicted RBP16.29■□□□□ 0.2
PTPN9-206ENST00000618819 DCAF17Q5H9S7 520 aaPredicted RBP16.29■□□□□ 0.2
PTPN9-206ENST00000618819 HAUS7Q99871 368 aa16.29■□□□□ 0.2
PTPN9-206ENST00000618819 IMPG2Q9BZV3 1241 aa16.29■□□□□ 0.2
PTPN9-206ENST00000618819 BAG2O95816 211 aa16.29■□□□□ 0.2
PTPN9-206ENST00000618819 HHATQ5VTY9 493 aa16.29■□□□□ 0.2
PTPN9-206ENST00000618819 CLSTN2Q9H4D0 955 aa16.29■□□□□ 0.2
PTPN9-206ENST00000618819 NBPF7P0C2Y1 421 aaPredicted RBP16.28■□□□□ 0.2
PTPN9-206ENST00000618819 KSR1Q8IVT5 923 aa16.28■□□□□ 0.2
PTPN9-206ENST00000618819 AKR1B15C9JRZ8 316 aaPredicted RBP16.28■□□□□ 0.2
PTPN9-206ENST00000618819 ARHGAP24Q8N264 748 aa16.28■□□□□ 0.2
PTPN9-206ENST00000618819 PROCA1Q8NCQ7 364 aaPredicted RBP16.28■□□□□ 0.2
PTPN9-206ENST00000618819 ZNF219Q9P2Y4 722 aaPredicted RBP16.28■□□□□ 0.2
PTPN9-206ENST00000618819 GABPB1Q06547 395 aaPredicted RBP16.28■□□□□ 0.2
PTPN9-206ENST00000618819 WTAPQ15007 396 aa16.28■□□□□ 0.2
PTPN9-206ENST00000618819 Q6ZUG5 572 aa16.28■□□□□ 0.2
PTPN9-206ENST00000618819 GDAP1L1Q96MZ0 367 aa16.28■□□□□ 0.2
PTPN9-206ENST00000618819 MRPL46Q9H2W6 279 aaKnown RBP16.28■□□□□ 0.2
PTPN9-206ENST00000618819 RSPH3Q86UC2 560 aa16.28■□□□□ 0.2
PTPN9-206ENST00000618819 GPIHBP1Q8IV16 184 aa16.28■□□□□ 0.2
PTPN9-206ENST00000618819 NKTRP30414 1462 aaKnown RBP16.27■□□□□ 0.2
PTPN9-206ENST00000618819 CALM1P0DP23 149 aa16.27■□□□□ 0.2
PTPN9-206ENST00000618819 CALM2P0DP24 149 aa16.27■□□□□ 0.2
PTPN9-206ENST00000618819 CALM3P0DP25 149 aa16.27■□□□□ 0.2
PTPN9-206ENST00000618819 PDE4BQ07343 736 aa16.27■□□□□ 0.2
PTPN9-206ENST00000618819 TBC1D31Q96DN5 1066 aa16.27■□□□□ 0.2
PTPN9-206ENST00000618819 ITIH3Q06033 890 aa16.27■□□□□ 0.2
PTPN9-206ENST00000618819 ABTB1Q969K4 478 aaPredicted RBP16.27■□□□□ 0.2
PTPN9-206ENST00000618819 ECHDC1Q9NTX5 307 aa16.27■□□□□ 0.2
PTPN9-206ENST00000618819 PPFIA2O75334 1257 aa16.27■□□□□ 0.2
PTPN9-206ENST00000618819 SIRT1Q96EB6 747 aa16.27■□□□□ 0.2
PTPN9-206ENST00000618819 PSMB7Q99436 277 aa16.27■□□□□ 0.2
PTPN9-206ENST00000618819 ATP6V1AP38606 617 aa16.27■□□□□ 0.2
PTPN9-206ENST00000618819 KRT9P35527 623 aa16.27■□□□□ 0.19
PTPN9-206ENST00000618819 BMP2KLQ5H9B9 411 aa16.27■□□□□ 0.19
PTPN9-206ENST00000618819 STX8Q9UNK0 236 aa16.27■□□□□ 0.19
PTPN9-206ENST00000618819 ZBTB43O43298 467 aa16.27■□□□□ 0.19
PTPN9-206ENST00000618819 ZSCAN26Q16670 478 aa16.27■□□□□ 0.19
PTPN9-206ENST00000618819 RILPQ96NA2 401 aa16.27■□□□□ 0.19
PTPN9-206ENST00000618819 SPTLC2O15270 562 aa16.26■□□□□ 0.19
PTPN9-206ENST00000618819 CTNND2Q9UQB3 1225 aa16.26■□□□□ 0.19
PTPN9-206ENST00000618819 TUBBP07437 444 aa16.26■□□□□ 0.19
PTPN9-206ENST00000618819 SPOPO43791 374 aa16.26■□□□□ 0.19
PTPN9-206ENST00000618819 KRT5P13647 590 aa16.26■□□□□ 0.19
PTPN9-206ENST00000618819 KLHL7Q8IXQ5 586 aa16.26■□□□□ 0.19
PTPN9-206ENST00000618819 STARD3NLO95772 234 aa16.26■□□□□ 0.19
PTPN9-206ENST00000618819 RPSAP08865 295 aaKnown RBP16.26■□□□□ 0.19
PTPN9-206ENST00000618819 ATICP31939 592 aa16.26■□□□□ 0.19
PTPN9-206ENST00000618819 FAM204AQ9H8W3 233 aa16.26■□□□□ 0.19
PTPN9-206ENST00000618819 HS1BP3Q53T59 392 aa16.26■□□□□ 0.19
PTPN9-206ENST00000618819 TAOK1Q7L7X3 1001 aa16.26■□□□□ 0.19
PTPN9-206ENST00000618819 HMG20BQ9P0W2 317 aa16.26■□□□□ 0.19
PTPN9-206ENST00000618819 SEPT8Q92599 483 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 IFIT1BQ5T764 474 aaKnown RBP16.25■□□□□ 0.19
PTPN9-206ENST00000618819 ANKRD42Q8N9B4 389 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 FAM170AA1A519 330 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 ARHGAP42A6NI28 874 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 TRIM27P14373 513 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 ATP2B3Q16720 1220 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 TRPC3Q13507 836 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 IFT20Q8IY31 132 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 KIFC2Q96AC6 838 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 SEPT10Q9P0V9 454 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 GAS8O95995 478 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 RTN1Q16799 776 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 AFG3L2Q9Y4W6 797 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 I3L4J1 428 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 INPP1P49441 399 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 LIG3P49916 1009 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 STAG1Q8WVM7 1258 aa16.25■□□□□ 0.19
PTPN9-206ENST00000618819 FYCO1Q9BQS8 1478 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms