RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ANKRD2Q9GZV1 360 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 TSPYL4Q9UJ04 414 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 NR2E3Q9Y5X4 410 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 PTCH2Q9Y6C5 1203 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 PLXNB2O15031 1838 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 GJB1P08034 283 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 RBM26Q5T8P6 1007 aaKnown RBP5.99□□□□□ -1.45
SNCA-213ENST00000618500 MOB2Q70IA6 237 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 POLR3GLQ9BT43 218 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 TCERG1O14776 1098 aaKnown RBP5.99□□□□□ -1.45
SNCA-213ENST00000618500 USP2O75604 605 aaPredicted RBP5.99□□□□□ -1.45
SNCA-213ENST00000618500 IL1R1P14778 569 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 ANKRD18AQ8IVF6 992 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 PTPN18Q99952 460 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 ANGEL1Q9UNK9 670 aaKnown RBP5.99□□□□□ -1.45
SNCA-213ENST00000618500 SLC45A1Q9Y2W3 748 aa5.99□□□□□ -1.45
SNCA-213ENST00000618500 G3V3G9 751 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 WDHD1O75717 1129 aaPredicted RBP5.98□□□□□ -1.45
SNCA-213ENST00000618500 KIF22Q14807 665 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 DCAF8Q5TAQ9 597 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 ANKRD23Q86SG2 305 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 HOOK2Q96ED9 719 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 CRISPLD2Q9H0B8 497 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 SPDYE5A6NIY4 337 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 TLR2O60603 784 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 HOXD10P28358 340 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 LACTBP83111 547 aaPredicted RBP5.98□□□□□ -1.45
SNCA-213ENST00000618500 IRF5Q13568 498 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 TNFAIP1Q13829 316 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 TTLL12Q14166 644 aaPredicted RBP5.98□□□□□ -1.45
SNCA-213ENST00000618500 SLAIN1Q8ND83 568 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 DEFB129Q9H1M3 183 aa5.98□□□□□ -1.45
SNCA-213ENST00000618500 SPDYE2BA6NHP3 402 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 SPDYE6P0CI01 402 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 CCT4P50991 539 aaKnown RBP5.97□□□□□ -1.45
SNCA-213ENST00000618500 CTSWP56202 376 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 CAP1Q01518 475 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 FKBP1CQ5VVH2 108 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 NGEFQ8N5V2 710 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 ANKIB1Q9P2G1 1089 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 ZNF236Q9UL36 1845 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 CETPP11597 493 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 HDLBPQ00341 1268 aaKnown RBP5.97□□□□□ -1.45
SNCA-213ENST00000618500 PPIL2Q13356 520 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 SPDYE2Q495Y8 402 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 C17orf99Q6UX52 265 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.97□□□□□ -1.45
SNCA-213ENST00000618500 PXYLP1Q8TE99 480 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 BRI3BPQ8WY22 251 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 TRIM47Q96LD4 638 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 MRIQ9BWK5 157 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 MIS18AQ9NYP9 233 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 MINPP1Q9UNW1 487 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 MAPK8IP3Q9UPT6 1336 aa5.97□□□□□ -1.45
SNCA-213ENST00000618500 MYO1BO43795 1136 aa5.96□□□□□ -1.45
SNCA-213ENST00000618500 NOL9Q5SY16 702 aaKnown RBP5.96□□□□□ -1.45
SNCA-213ENST00000618500 GDF15Q99988 308 aa5.96□□□□□ -1.45
SNCA-213ENST00000618500 THUMPD2Q9BTF0 503 aaKnown RBP5.96□□□□□ -1.45
SNCA-213ENST00000618500 SRRDQ9UH36 339 aa5.96□□□□□ -1.45
SNCA-213ENST00000618500 SERPINA10Q9UK55 444 aa5.96□□□□□ -1.45
SNCA-213ENST00000618500 ARIH1Q9Y4X5 557 aaPredicted RBP5.96□□□□□ -1.45
SNCA-213ENST00000618500 ATAD5Q96QE3 1844 aa5.96□□□□□ -1.46
SNCA-213ENST00000618500 TRIM26Q12899 539 aaPredicted RBP5.96□□□□□ -1.46
SNCA-213ENST00000618500 OPTNQ96CV9 577 aa5.96□□□□□ -1.46
SNCA-213ENST00000618500 FAM89AQ96GI7 184 aa5.96□□□□□ -1.46
SNCA-213ENST00000618500 TEPSINQ96N21 525 aa5.96□□□□□ -1.46
SNCA-213ENST00000618500 CWC25Q9NXE8 425 aaPredicted RBP5.96□□□□□ -1.46
SNCA-213ENST00000618500 UBXN2AP68543 259 aa5.96□□□□□ -1.46
SNCA-213ENST00000618500 POLA2Q14181 598 aa5.96□□□□□ -1.46
SNCA-213ENST00000618500 DLGAP5Q15398 846 aa5.96□□□□□ -1.46
SNCA-213ENST00000618500 SLC4A8Q2Y0W8 1093 aa5.96□□□□□ -1.46
SNCA-213ENST00000618500 METTL22Q9BUU2 404 aaPredicted RBP5.96□□□□□ -1.46
SNCA-213ENST00000618500 CHPF2Q9P2E5 772 aa5.96□□□□□ -1.46
SNCA-213ENST00000618500 KCNH4Q9UQ05 1017 aa5.96□□□□□ -1.46
SNCA-213ENST00000618500 KIF16BQ96L93 1317 aa5.95□□□□□ -1.46
SNCA-213ENST00000618500 ZNF853P0CG23 659 aa5.95□□□□□ -1.46
SNCA-213ENST00000618500 MAP3K9P80192 1104 aa5.95□□□□□ -1.46
SNCA-213ENST00000618500 GOLGA2Q08379 1002 aa5.95□□□□□ -1.46
SNCA-213ENST00000618500 CLMNQ96JQ2 1002 aa5.95□□□□□ -1.46
SNCA-213ENST00000618500 PAK6Q9NQU5 681 aaPredicted RBP5.95□□□□□ -1.46
SNCA-213ENST00000618500 SASH1O94885 1247 aa5.95□□□□□ -1.46
SNCA-213ENST00000618500 CSF1RP07333 972 aa5.95□□□□□ -1.46
SNCA-213ENST00000618500 TAF1CQ15572 869 aaPredicted RBP5.95□□□□□ -1.46
SNCA-213ENST00000618500 FAM83AQ86UY5 434 aa5.95□□□□□ -1.46
SNCA-213ENST00000618500 SEC31BQ9NQW1 1179 aa5.95□□□□□ -1.46
SNCA-213ENST00000618500 FARP2O94887 1054 aaPredicted RBP5.94□□□□□ -1.46
SNCA-213ENST00000618500 CCL5P13501 91 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 TNNI2P48788 182 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 EVX2Q03828 476 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 PPATQ06203 517 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 SNAPC2Q13487 334 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 HDGFL1Q5TGJ6 251 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.94□□□□□ -1.46
SNCA-213ENST00000618500 ERO1BQ86YB8 467 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 TTLL11Q8NHH1 800 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 ZNF112Q9UJU3 913 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 SUGT1Q9Y2Z0 365 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 TMEM265A0A087WTH1 108 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 CCL15-CCL14A0A0B4J2E2 113 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 SOX1O00570 391 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms