RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 SLC5A1P13866 664 aa30.94■■■□□ 2.54
PMS1-220ENST00000618056 FMR1Q06787 632 aaKnown RBP eCLIP30.94■■■□□ 2.54
PMS1-220ENST00000618056 KIAA0825Q8IV33 1275 aa30.94■■■□□ 2.54
PMS1-220ENST00000618056 DCPSQ96C86 337 aaKnown RBP30.94■■■□□ 2.54
PMS1-220ENST00000618056 SCARF1Q14162 830 aa30.93■■■□□ 2.54
PMS1-220ENST00000618056 HDAC9Q9UKV0 1011 aa30.93■■■□□ 2.54
PMS1-220ENST00000618056 PNMA6EA0A0J9YXQ4 647 aa30.92■■■□□ 2.54
PMS1-220ENST00000618056 GGA3Q9NZ52 723 aa30.92■■■□□ 2.54
PMS1-220ENST00000618056 ECM29Q5VYK3 1845 aa30.92■■■□□ 2.54
PMS1-220ENST00000618056 KRT26Q7Z3Y9 468 aa30.91■■■□□ 2.54
PMS1-220ENST00000618056 BCAMP50895 628 aa30.9■■■□□ 2.54
PMS1-220ENST00000618056 ATP2B3Q16720 1220 aa30.9■■■□□ 2.54
PMS1-220ENST00000618056 CST9Q5W186 159 aa30.9■■■□□ 2.54
PMS1-220ENST00000618056 ASTN2O75129 1339 aaPredicted RBP30.9■■■□□ 2.54
PMS1-220ENST00000618056 PITPNM2Q9BZ72 1349 aa30.9■■■□□ 2.54
PMS1-220ENST00000618056 USP48Q86UV5 1035 aa30.89■■■□□ 2.54
PMS1-220ENST00000618056 JAG2Q9Y219 1238 aa30.89■■■□□ 2.54
PMS1-220ENST00000618056 WNT10BO00744 389 aa30.89■■■□□ 2.53
PMS1-220ENST00000618056 ATP8B2P98198 1209 aa30.89■■■□□ 2.53
PMS1-220ENST00000618056 POLA2Q14181 598 aa30.89■■■□□ 2.53
PMS1-220ENST00000618056 MFSD14BQ5SR56 506 aa30.89■■■□□ 2.53
PMS1-220ENST00000618056 CNTNAP1P78357 1384 aa30.88■■■□□ 2.53
PMS1-220ENST00000618056 NBPF9Q3BBW0 867 aa30.88■■■□□ 2.53
PMS1-220ENST00000618056 ANGEL2Q5VTE6 544 aaKnown RBP30.88■■■□□ 2.53
PMS1-220ENST00000618056 JMYQ8N9B5 988 aa30.88■■■□□ 2.53
PMS1-220ENST00000618056 SSH3Q8TE77 659 aa30.88■■■□□ 2.53
PMS1-220ENST00000618056 ZBED3Q96IU2 234 aaPredicted RBP30.88■■■□□ 2.53
PMS1-220ENST00000618056 SULF1Q8IWU6 871 aa30.87■■■□□ 2.53
PMS1-220ENST00000618056 C1orf115Q9H7X2 142 aa30.87■■■□□ 2.53
PMS1-220ENST00000618056 IQSEC3Q9UPP2 1182 aaPredicted RBP30.87■■■□□ 2.53
PMS1-220ENST00000618056 CELF2O95319 508 aaKnown RBP30.86■■■□□ 2.53
PMS1-220ENST00000618056 MVPQ14764 893 aaKnown RBP30.86■■■□□ 2.53
PMS1-220ENST00000618056 MTMR14Q8NCE2 650 aa30.86■■■□□ 2.53
PMS1-220ENST00000618056 FRAT2O75474 233 aaPredicted RBP30.85■■■□□ 2.53
PMS1-220ENST00000618056 TBC1D22AQ8WUA7 517 aa30.85■■■□□ 2.53
PMS1-220ENST00000618056 RASSF10A6NK89 507 aa30.84■■■□□ 2.53
PMS1-220ENST00000618056 ADM5C9JUS6 153 aa30.84■■■□□ 2.53
PMS1-220ENST00000618056 MKRN1Q9UHC7 482 aaKnown RBP30.84■■■□□ 2.53
PMS1-220ENST00000618056 DDX19BQ9UMR2 479 aa30.84■■■□□ 2.53
PMS1-220ENST00000618056 AKAP2Q9Y2D5 859 aa30.84■■■□□ 2.53
PMS1-220ENST00000618056 TFCP2Q12800 502 aa30.83■■■□□ 2.53
PMS1-220ENST00000618056 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.83■■■□□ 2.53
PMS1-220ENST00000618056 ABT1Q9ULW3 272 aaKnown RBP30.83■■■□□ 2.53
PMS1-220ENST00000618056 F8W031 263 aaPredicted RBP30.82■■■□□ 2.53
PMS1-220ENST00000618056 ZBTB22O15209 634 aa30.82■■■□□ 2.53
PMS1-220ENST00000618056 G3BP1Q13283 466 aaKnown RBP eCLIP30.82■■■□□ 2.53
PMS1-220ENST00000618056 DLGAP5Q15398 846 aa30.82■■■□□ 2.53
PMS1-220ENST00000618056 TLL2Q9Y6L7 1015 aa30.82■■■□□ 2.53
PMS1-220ENST00000618056 CHAF1AQ13111 956 aaPredicted RBP30.82■■■□□ 2.52
PMS1-220ENST00000618056 PDE3AQ14432 1141 aa30.82■■■□□ 2.52
PMS1-220ENST00000618056 DEFB115Q30KQ5 88 aa30.82■■■□□ 2.52
PMS1-220ENST00000618056 DLK2Q6UY11 383 aa30.82■■■□□ 2.52
PMS1-220ENST00000618056 ZNF408Q9H9D4 720 aa30.81■■■□□ 2.52
PMS1-220ENST00000618056 COG6Q9Y2V7 657 aa30.81■■■□□ 2.52
PMS1-220ENST00000618056 CEP85Q6P2H3 762 aa30.8■■■□□ 2.52
PMS1-220ENST00000618056 GNL3LQ9NVN8 582 aaKnown RBP30.8■■■□□ 2.52
PMS1-220ENST00000618056 TTF2Q9UNY4 1162 aaKnown RBP30.8■■■□□ 2.52
PMS1-220ENST00000618056 A0A1B0GUL7 405 aa30.79■■■□□ 2.52
PMS1-220ENST00000618056 TIMM10P62072 90 aa30.79■■■□□ 2.52
PMS1-220ENST00000618056 CFAP100Q494V2 611 aa30.79■■■□□ 2.52
PMS1-220ENST00000618056 SAPCD2Q86UD0 394 aa30.79■■■□□ 2.52
PMS1-220ENST00000618056 SERPINA10Q9UK55 444 aa30.79■■■□□ 2.52
PMS1-220ENST00000618056 COL1A1P02452 1464 aaPredicted RBP30.78■■■□□ 2.52
PMS1-220ENST00000618056 SPDYE2BA6NHP3 402 aa30.78■■■□□ 2.52
PMS1-220ENST00000618056 SPDYE6P0CI01 402 aa30.78■■■□□ 2.52
PMS1-220ENST00000618056 ADORA1P30542 326 aa30.78■■■□□ 2.52
PMS1-220ENST00000618056 CHMP4BQ9H444 224 aaKnown RBP30.78■■■□□ 2.52
PMS1-220ENST00000618056 NOP58Q9Y2X3 529 aaKnown RBP30.78■■■□□ 2.52
PMS1-220ENST00000618056 SUGT1Q9Y2Z0 365 aa30.78■■■□□ 2.52
PMS1-220ENST00000618056 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.78■■■□□ 2.52
PMS1-220ENST00000618056 SEMA3EO15041 775 aa30.77■■■□□ 2.52
PMS1-220ENST00000618056 PHKA1P46020 1223 aa30.77■■■□□ 2.52
PMS1-220ENST00000618056 WDR66Q8TBY9 1149 aa30.77■■■□□ 2.52
PMS1-220ENST00000618056 CDCA5Q96FF9 252 aa30.77■■■□□ 2.52
PMS1-220ENST00000618056 YTHDC1Q96MU7 727 aaKnown RBP30.77■■■□□ 2.52
PMS1-220ENST00000618056 ZBTB40Q9NUA8 1239 aa30.77■■■□□ 2.52
PMS1-220ENST00000618056 VEGFBP49765 207 aa30.76■■■□□ 2.52
PMS1-220ENST00000618056 CCDC102BQ68D86 513 aa30.76■■■□□ 2.52
PMS1-220ENST00000618056 APOBEC3FQ8IUX4 373 aaKnown RBP30.76■■■□□ 2.52
PMS1-220ENST00000618056 HHIPL1Q96JK4 782 aa30.76■■■□□ 2.52
PMS1-220ENST00000618056 PCDHAC2Q9Y5I4 1007 aa30.76■■■□□ 2.52
PMS1-220ENST00000618056 SURF6O75683 361 aaKnown RBP30.76■■■□□ 2.51
PMS1-220ENST00000618056 HDLBPQ00341 1268 aaKnown RBP30.76■■■□□ 2.51
PMS1-220ENST00000618056 GRIK5Q16478 980 aa30.76■■■□□ 2.51
PMS1-220ENST00000618056 XAGE2Q96GT9 111 aa30.76■■■□□ 2.51
PMS1-220ENST00000618056 PRMT6Q96LA8 375 aaPredicted RBP30.75■■■□□ 2.51
PMS1-220ENST00000618056 GBA2Q9HCG7 927 aaPredicted RBP30.75■■■□□ 2.51
PMS1-220ENST00000618056 DENND2AQ9ULE3 1009 aa30.75■■■□□ 2.51
PMS1-220ENST00000618056 MYO1BO43795 1136 aa30.74■■■□□ 2.51
PMS1-220ENST00000618056 C20orf194Q5TEA3 1177 aa30.74■■■□□ 2.51
PMS1-220ENST00000618056 MRIQ9BWK5 157 aa30.74■■■□□ 2.51
PMS1-220ENST00000618056 GPR108Q9NPR9 543 aa30.74■■■□□ 2.51
PMS1-220ENST00000618056 RBM5P52756 815 aaKnown RBP eCLIP30.73■■■□□ 2.51
PMS1-220ENST00000618056 SCAF8Q9UPN6 1271 aaKnown RBP30.73■■■□□ 2.51
PMS1-220ENST00000618056 MAST3O60307 1309 aa30.73■■■□□ 2.51
PMS1-220ENST00000618056 CRKP46108 304 aa30.72■■■□□ 2.51
PMS1-220ENST00000618056 OS9Q13438 667 aaPredicted RBP30.72■■■□□ 2.51
PMS1-220ENST00000618056 C2orf69Q8N8R5 385 aa30.72■■■□□ 2.51
PMS1-220ENST00000618056 NEUROD6Q96NK8 337 aa30.72■■■□□ 2.51
PMS1-220ENST00000618056 PDS5AQ29RF7 1337 aaKnown RBP30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms