RNA–Protein interactions for RNA: ENST00000617719.4

ATXN3-251, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-251ENST00000617719 PREX2Q70Z35 1606 aa6.96□□□□□ -1.3
ATXN3-251ENST00000617719 CDC42BPAQ5VT25 1732 aa6.96□□□□□ -1.3
ATXN3-251ENST00000617719 TNFRSF10BO14763 440 aa6.95□□□□□ -1.3
ATXN3-251ENST00000617719 HOXD8P13378 290 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-251ENST00000617719 SOX18P35713 384 aa6.95□□□□□ -1.3
ATXN3-251ENST00000617719 SETDB1Q15047 1291 aa6.95□□□□□ -1.3
ATXN3-251ENST00000617719 C16orf46Q6P387 395 aa6.95□□□□□ -1.3
ATXN3-251ENST00000617719 BCL11AQ9H165 835 aa6.95□□□□□ -1.3
ATXN3-251ENST00000617719 ABCC1P33527 1531 aa6.95□□□□□ -1.3
ATXN3-251ENST00000617719 ARID4BQ4LE39 1312 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-251ENST00000617719 REREQ9P2R6 1566 aa6.95□□□□□ -1.3
ATXN3-251ENST00000617719 C9orf84Q5VXU9 1444 aa6.94□□□□□ -1.3
ATXN3-251ENST00000617719 NAA30Q147X3 362 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-251ENST00000617719 COL13A1Q5TAT6 717 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-251ENST00000617719 PRR23CQ6ZRP0 262 aa6.94□□□□□ -1.3
ATXN3-251ENST00000617719 NLRP13Q86W25 1043 aa6.94□□□□□ -1.3
ATXN3-251ENST00000617719 DZIP1LQ8IYY4 767 aaKnown RBP6.94□□□□□ -1.3
ATXN3-251ENST00000617719 CFDP1Q9UEE9 299 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-251ENST00000617719 MTUS2Q5JR59 1369 aa6.94□□□□□ -1.3
ATXN3-251ENST00000617719 AGLP35573 1532 aa6.93□□□□□ -1.3
ATXN3-251ENST00000617719 MAP3K1Q13233 1512 aa6.93□□□□□ -1.3
ATXN3-251ENST00000617719 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-251ENST00000617719 F8W735 103 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-251ENST00000617719 BRD2P25440 801 aaKnown RBP6.93□□□□□ -1.3
ATXN3-251ENST00000617719 HNRNPMP52272 730 aaKnown RBP eCLIP6.93□□□□□ -1.3
ATXN3-251ENST00000617719 AGGF1Q8N302 714 aaeCLIP6.93□□□□□ -1.3
ATXN3-251ENST00000617719 MRPL18Q9H0U6 180 aaKnown RBP6.93□□□□□ -1.3
ATXN3-251ENST00000617719 HECW2Q9P2P5 1572 aa6.93□□□□□ -1.3
ATXN3-251ENST00000617719 CCNB3Q8WWL7 1395 aa6.93□□□□□ -1.3
ATXN3-251ENST00000617719 VPS8Q8N3P4 1428 aa6.93□□□□□ -1.3
ATXN3-251ENST00000617719 PLEKHH2Q8IVE3 1493 aa6.92□□□□□ -1.3
ATXN3-251ENST00000617719 MBD5Q9P267 1494 aa6.92□□□□□ -1.3
ATXN3-251ENST00000617719 SAMD9LQ8IVG5 1584 aa6.92□□□□□ -1.3
ATXN3-251ENST00000617719 DIP2CQ9Y2E4 1556 aa6.92□□□□□ -1.3
ATXN3-251ENST00000617719 MADDQ8WXG6 1647 aa6.92□□□□□ -1.3
ATXN3-251ENST00000617719 UBAP1LF5GYI3 381 aa6.92□□□□□ -1.3
ATXN3-251ENST00000617719 EIF5BO60841 1220 aaKnown RBP6.92□□□□□ -1.3
ATXN3-251ENST00000617719 SRPK2P78362 688 aaKnown RBP6.92□□□□□ -1.3
ATXN3-251ENST00000617719 ATP11AP98196 1134 aa6.92□□□□□ -1.3
ATXN3-251ENST00000617719 ELOAQ14241 798 aaKnown RBP6.92□□□□□ -1.3
ATXN3-251ENST00000617719 ADAMTSL4Q6UY14 1074 aa6.92□□□□□ -1.3
ATXN3-251ENST00000617719 TMEM130Q8N3G9 435 aa6.92□□□□□ -1.3
ATXN3-251ENST00000617719 RBSNQ9H1K0 784 aa6.92□□□□□ -1.3
ATXN3-251ENST00000617719 RNF112Q9ULX5 631 aa6.92□□□□□ -1.3
ATXN3-251ENST00000617719 KIDINS220Q9ULH0 1771 aa6.92□□□□□ -1.3
ATXN3-251ENST00000617719 ITSN2Q9NZM3 1697 aa6.91□□□□□ -1.3
ATXN3-251ENST00000617719 ZBTB39O15060 712 aa6.91□□□□□ -1.3
ATXN3-251ENST00000617719 GALNT11Q8NCW6 608 aa6.91□□□□□ -1.3
ATXN3-251ENST00000617719 OR13H1Q8NG92 308 aa6.91□□□□□ -1.3
ATXN3-251ENST00000617719 PIK3R5Q8WYR1 880 aa6.91□□□□□ -1.3
ATXN3-251ENST00000617719 COL26A1Q96A83 441 aa6.91□□□□□ -1.3
ATXN3-251ENST00000617719 CXXC1Q9P0U4 656 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-251ENST00000617719 ZNF644Q9H582 1327 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-251ENST00000617719 RTEL1-TNFRSF6BF6WH68 1400 aa6.91□□□□□ -1.3
ATXN3-251ENST00000617719 EHBP1L1Q8N3D4 1523 aa6.91□□□□□ -1.3
ATXN3-251ENST00000617719 LINC01387J3KSC0 135 aa6.9□□□□□ -1.3
ATXN3-251ENST00000617719 FSTP19883 344 aa6.9□□□□□ -1.3
ATXN3-251ENST00000617719 ZAP70P43403 619 aa6.9□□□□□ -1.3
ATXN3-251ENST00000617719 TMEM164Q5U3C3 297 aa6.9□□□□□ -1.3
ATXN3-251ENST00000617719 TXNDC11Q6PKC3 985 aa6.9□□□□□ -1.3
ATXN3-251ENST00000617719 Q6ZS46 218 aa6.9□□□□□ -1.3
ATXN3-251ENST00000617719 GPR152Q8TDT2 470 aa6.9□□□□□ -1.3
ATXN3-251ENST00000617719 LACRTQ9GZZ8 138 aa6.9□□□□□ -1.3
ATXN3-251ENST00000617719 PPME1Q9Y570 386 aa6.9□□□□□ -1.3
ATXN3-251ENST00000617719 SPAG9O60271 1321 aaKnown RBP6.9□□□□□ -1.3
ATXN3-251ENST00000617719 TIAM1Q13009 1591 aa6.9□□□□□ -1.31
ATXN3-251ENST00000617719 ABCA6Q8N139 1617 aa6.9□□□□□ -1.31
ATXN3-251ENST00000617719 SETD1BQ9UPS6 1966 aaKnown RBP6.89□□□□□ -1.31
ATXN3-251ENST00000617719 WISP1O95388 367 aa6.89□□□□□ -1.31
ATXN3-251ENST00000617719 GLB1P16278 677 aa6.89□□□□□ -1.31
ATXN3-251ENST00000617719 CDC25BP30305 580 aa6.89□□□□□ -1.31
ATXN3-251ENST00000617719 MLECQ14165 292 aa6.89□□□□□ -1.31
ATXN3-251ENST00000617719 MAP4K3Q8IVH8 894 aa6.89□□□□□ -1.31
ATXN3-251ENST00000617719 UBL7Q96S82 380 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-251ENST00000617719 SRA1Q9HD15 236 aaKnown RBP6.89□□□□□ -1.31
ATXN3-251ENST00000617719 SLAIN2Q9P270 581 aa6.89□□□□□ -1.31
ATXN3-251ENST00000617719 NCOA2Q15596 1464 aa6.89□□□□□ -1.31
ATXN3-251ENST00000617719 LRRC9Q6ZRR7 1453 aa6.89□□□□□ -1.31
ATXN3-251ENST00000617719 SYCP2Q9BX26 1530 aa6.89□□□□□ -1.31
ATXN3-251ENST00000617719 RIMS1Q86UR5 1692 aaKnown RBP6.88□□□□□ -1.31
ATXN3-251ENST00000617719 CYP2E1P05181 493 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-251ENST00000617719 CEBPAP49715 358 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-251ENST00000617719 HYAL2Q12891 473 aa6.88□□□□□ -1.31
ATXN3-251ENST00000617719 CEP135Q66GS9 1140 aa6.88□□□□□ -1.31
ATXN3-251ENST00000617719 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.88□□□□□ -1.31
ATXN3-251ENST00000617719 CARD10Q9BWT7 1032 aa6.88□□□□□ -1.31
ATXN3-251ENST00000617719 RASSF4Q9H2L5 321 aa6.88□□□□□ -1.31
ATXN3-251ENST00000617719 KCNK4Q9NYG8 393 aa6.88□□□□□ -1.31
ATXN3-251ENST00000617719 INO80Q9ULG1 1556 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-251ENST00000617719 DHX29Q7Z478 1369 aaKnown RBP6.87□□□□□ -1.31
ATXN3-251ENST00000617719 TM4SF5O14894 197 aa6.87□□□□□ -1.31
ATXN3-251ENST00000617719 ATG7O95352 703 aa6.87□□□□□ -1.31
ATXN3-251ENST00000617719 SCNN1AP37088 669 aa6.87□□□□□ -1.31
ATXN3-251ENST00000617719 TTC39BQ5VTQ0 682 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-251ENST00000617719 MUC3BQ9H195 1237 aa6.87□□□□□ -1.31
ATXN3-251ENST00000617719 STIM2Q9P246 746 aa6.87□□□□□ -1.31
ATXN3-251ENST00000617719 FER1L4A9Z1Z3 1794 aa6.87□□□□□ -1.31
ATXN3-251ENST00000617719 SUPT6HQ7KZ85 1726 aaKnown RBP6.87□□□□□ -1.31
ATXN3-251ENST00000617719 PLXNC1O60486 1568 aa6.86□□□□□ -1.31
ATXN3-251ENST00000617719 ATP7AQ04656 1500 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms