RNA–Protein interactions for RNA: ENST00000617346.4

RPL17-222, Transcript of ribosomal protein L17, human

TSL 5

Gene RPL17, Length 795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL17-222	ENST00000617346	WNK4	Q96J92	1243 aa		13.3	□□□□□ -0.28
RPL17-222	ENST00000617346	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.3	□□□□□ -0.28
RPL17-222	ENST00000617346	HDAC9	Q9UKV0	1011 aa		13.3	□□□□□ -0.28
RPL17-222	ENST00000617346	OTOF	Q9HC10	1997 aa		13.29	□□□□□ -0.28
RPL17-222	ENST00000617346	USP2	O75604	605 aa	Predicted RBP	13.29	□□□□□ -0.28
RPL17-222	ENST00000617346	GRIK5	Q16478	980 aa		13.29	□□□□□ -0.28
RPL17-222	ENST00000617346	OTOP1	Q7RTM1	612 aa		13.29	□□□□□ -0.28
RPL17-222	ENST00000617346	ZNF594	Q96JF6	807 aa	Predicted RBP	13.29	□□□□□ -0.28
RPL17-222	ENST00000617346	ECM29	Q5VYK3	1845 aa		13.28	□□□□□ -0.28
RPL17-222	ENST00000617346	SPDYE2B	A6NHP3	402 aa		13.28	□□□□□ -0.28
RPL17-222	ENST00000617346		F6X3S4	739 aa		13.28	□□□□□ -0.28
RPL17-222	ENST00000617346		F8W031	263 aa	Predicted RBP	13.28	□□□□□ -0.28
RPL17-222	ENST00000617346	VAMP4	O75379	141 aa		13.28	□□□□□ -0.28
RPL17-222	ENST00000617346	SPDYE6	P0CI01	402 aa		13.28	□□□□□ -0.28
RPL17-222	ENST00000617346	IL1R1	P14778	569 aa		13.28	□□□□□ -0.28
RPL17-222	ENST00000617346	IGHMBP2	P38935	993 aa	Known RBP	13.28	□□□□□ -0.28
RPL17-222	ENST00000617346	CALD1	Q05682	793 aa	Known RBP	13.28	□□□□□ -0.28
RPL17-222	ENST00000617346	CCDC27	Q2M243	656 aa		13.28	□□□□□ -0.28
RPL17-222	ENST00000617346	ARMC9	Q7Z3E5	817 aa		13.28	□□□□□ -0.28
RPL17-222	ENST00000617346	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.28	□□□□□ -0.28
RPL17-222	ENST00000617346	CNKSR2	Q8WXI2	1034 aa		13.28	□□□□□ -0.28
RPL17-222	ENST00000617346	DNAAF4	Q8WXU2	420 aa		13.28	□□□□□ -0.28
RPL17-222	ENST00000617346	SREBF2	Q12772	1141 aa		13.27	□□□□□ -0.29
RPL17-222	ENST00000617346	CFAP100	Q494V2	611 aa		13.27	□□□□□ -0.29
RPL17-222	ENST00000617346	BEND3	Q5T5X7	828 aa		13.27	□□□□□ -0.29
RPL17-222	ENST00000617346	LINS1	Q8NG48	757 aa		13.27	□□□□□ -0.29
RPL17-222	ENST00000617346	KAZALD1	Q96I82	304 aa		13.27	□□□□□ -0.29
RPL17-222	ENST00000617346	MS4A4A	Q96JQ5	239 aa		13.27	□□□□□ -0.29
RPL17-222	ENST00000617346	TEPSIN	Q96N21	525 aa		13.27	□□□□□ -0.29
RPL17-222	ENST00000617346	ANKRD2	Q9GZV1	360 aa		13.27	□□□□□ -0.29
RPL17-222	ENST00000617346	FANCI	Q9NVI1	1328 aa		13.27	□□□□□ -0.29
RPL17-222	ENST00000617346	COL1A1	P02452	1464 aa	Predicted RBP	13.27	□□□□□ -0.29
RPL17-222	ENST00000617346	RANBP2	P49792	3224 aa	Known RBP	13.26	□□□□□ -0.29
RPL17-222	ENST00000617346	TESPA1	A2RU30	521 aa	Predicted RBP	13.26	□□□□□ -0.29
RPL17-222	ENST00000617346	NEXN	Q0ZGT2	675 aa		13.26	□□□□□ -0.29
RPL17-222	ENST00000617346	CRHR2	Q13324	411 aa		13.26	□□□□□ -0.29
RPL17-222	ENST00000617346	DLGAP5	Q15398	846 aa		13.26	□□□□□ -0.29
RPL17-222	ENST00000617346	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.26	□□□□□ -0.29
RPL17-222	ENST00000617346	TRIM17	Q9Y577	477 aa		13.26	□□□□□ -0.29
RPL17-222	ENST00000617346	ZSWIM8	A7E2V4	1837 aa		13.25	□□□□□ -0.29
RPL17-222	ENST00000617346	MMP14	P50281	582 aa		13.25	□□□□□ -0.29
RPL17-222	ENST00000617346	RASA3	Q14644	834 aa		13.25	□□□□□ -0.29
RPL17-222	ENST00000617346	CD99L2	Q8TCZ2	262 aa		13.25	□□□□□ -0.29
RPL17-222	ENST00000617346	SLC10A4	Q96EP9	437 aa		13.25	□□□□□ -0.29
RPL17-222	ENST00000617346	MPHOSPH8	Q99549	860 aa		13.25	□□□□□ -0.29
RPL17-222	ENST00000617346	PUS3	Q9BZE2	481 aa	Known RBP	13.25	□□□□□ -0.29
RPL17-222	ENST00000617346	IL16	Q14005	1332 aa		13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	FAM205A	Q6ZU69	1335 aa		13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	MANSC4	A6NHS7	340 aa	Predicted RBP	13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	ZBTB48	P10074	688 aa	Predicted RBP	13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	EN2	P19622	333 aa	Predicted RBP	13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	NF2	P35240	595 aa		13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	FKBP5	Q13451	457 aa	Predicted RBP	13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	LMBR1L	Q6UX01	489 aa		13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	STK31	Q9BXU1	1019 aa		13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	PTPN22	Q9Y2R2	807 aa		13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	KIAA0100	Q14667	2235 aa	Known RBP	13.24	□□□□□ -0.29
RPL17-222	ENST00000617346	ANKRD18B	A2A2Z9	1011 aa		13.23	□□□□□ -0.29
RPL17-222	ENST00000617346	GYG1	P46976	350 aa		13.23	□□□□□ -0.29
RPL17-222	ENST00000617346	FKBP1A	P62942	108 aa	Known RBP	13.23	□□□□□ -0.29
RPL17-222	ENST00000617346	EXOSC9	Q06265	439 aa	Known RBP	13.23	□□□□□ -0.29
RPL17-222	ENST00000617346	TDRD7	Q8NHU6	1098 aa	Known RBP	13.23	□□□□□ -0.29
RPL17-222	ENST00000617346	BRI3BP	Q8WY22	251 aa		13.23	□□□□□ -0.29
RPL17-222	ENST00000617346	FAM84B	Q96KN1	310 aa	Predicted RBP	13.23	□□□□□ -0.29
RPL17-222	ENST00000617346	INHBE	P58166	350 aa		13.22	□□□□□ -0.29
RPL17-222	ENST00000617346	SPDYE2	Q495Y8	402 aa		13.22	□□□□□ -0.29
RPL17-222	ENST00000617346	ARMC5	Q96C12	935 aa		13.22	□□□□□ -0.29
RPL17-222	ENST00000617346	TDRD3	Q9H7E2	651 aa	Known RBP	13.22	□□□□□ -0.29
RPL17-222	ENST00000617346	VEZT	Q9HBM0	779 aa		13.22	□□□□□ -0.29
RPL17-222	ENST00000617346	ZNF70	Q9UC06	446 aa	Predicted RBP	13.22	□□□□□ -0.29
RPL17-222	ENST00000617346	PPP2R3B	Q9Y5P8	575 aa		13.22	□□□□□ -0.29
RPL17-222	ENST00000617346	ALDH1A1	P00352	501 aa		13.21	□□□□□ -0.29
RPL17-222	ENST00000617346	KCNJ4	P48050	445 aa		13.21	□□□□□ -0.29
RPL17-222	ENST00000617346	IFIT5	Q13325	482 aa	Known RBP	13.21	□□□□□ -0.29
RPL17-222	ENST00000617346	HABP4	Q5JVS0	413 aa	Known RBP	13.21	□□□□□ -0.29
RPL17-222	ENST00000617346	FAM43A	Q8N2R8	423 aa		13.21	□□□□□ -0.29
RPL17-222	ENST00000617346	SUCLG2	Q96I99	432 aa		13.21	□□□□□ -0.29
RPL17-222	ENST00000617346	TMEM39B	Q9GZU3	492 aa		13.21	□□□□□ -0.29
RPL17-222	ENST00000617346	MYH16	Q9H6N6	1097 aa		13.21	□□□□□ -0.29
RPL17-222	ENST00000617346	ELP3	Q9H9T3	547 aa		13.21	□□□□□ -0.29
RPL17-222	ENST00000617346	ARAP2	Q8WZ64	1704 aa		13.2	□□□□□ -0.3
RPL17-222	ENST00000617346	PPP1R12B	O60237	982 aa	Predicted RBP	13.2	□□□□□ -0.3
RPL17-222	ENST00000617346	PLIN1	O60240	522 aa		13.2	□□□□□ -0.3
RPL17-222	ENST00000617346	OPTN	Q96CV9	577 aa		13.2	□□□□□ -0.3
RPL17-222	ENST00000617346	ARHGAP39	Q9C0H5	1083 aa		13.2	□□□□□ -0.3
RPL17-222	ENST00000617346	RIPOR2	Q9Y4F9	1068 aa		13.2	□□□□□ -0.3
RPL17-222	ENST00000617346	UNCX	A6NJT0	531 aa		13.19	□□□□□ -0.3
RPL17-222	ENST00000617346	GRM8	O00222	908 aa		13.19	□□□□□ -0.3
RPL17-222	ENST00000617346	CTGF	P29279	349 aa		13.19	□□□□□ -0.3
RPL17-222	ENST00000617346	CACNB3	P54284	484 aa		13.19	□□□□□ -0.3
RPL17-222	ENST00000617346	VGLL4	Q14135	290 aa		13.19	□□□□□ -0.3
RPL17-222	ENST00000617346	LDHAL6A	Q6ZMR3	332 aa		13.19	□□□□□ -0.3
RPL17-222	ENST00000617346	ZNF804A	Q7Z570	1209 aa		13.19	□□□□□ -0.3
RPL17-222	ENST00000617346	DZIP1L	Q8IYY4	767 aa	Known RBP	13.19	□□□□□ -0.3
RPL17-222	ENST00000617346	ANKRD13A	Q8IZ07	590 aa		13.19	□□□□□ -0.3
RPL17-222	ENST00000617346	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.19	□□□□□ -0.3	4e-54	■□□□□ 8.2
RPL17-222	ENST00000617346	ZNF333	Q96JL9	665 aa		13.19	□□□□□ -0.3
RPL17-222	ENST00000617346	SALL2	Q9Y467	1007 aa	Predicted RBP	13.19	□□□□□ -0.3

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