RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 LRRFIP1Q32MZ4 808 aaKnown RBP18.06■□□□□ 0.48
GPN1-212ENST00000616939 EPHA10Q5JZY3 1008 aa18.06■□□□□ 0.48
GPN1-212ENST00000616939 RIC3Q7Z5B4 369 aa18.06■□□□□ 0.48
GPN1-212ENST00000616939 UBXN4Q92575 508 aa18.06■□□□□ 0.48
GPN1-212ENST00000616939 LAMB4A4D0S4 1761 aa18.06■□□□□ 0.48
GPN1-212ENST00000616939 FANCCQ00597 558 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 TFCP2Q12800 502 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 ZMYM1Q5SVZ6 1142 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 TRIM65Q6PJ69 517 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 LRRC2Q9BYS8 371 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 GPR108Q9NPR9 543 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 ST7Q9NRC1 585 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 NWD2Q9ULI1 1742 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 KIF13AQ9H1H9 1805 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 A0A087WWV3 80 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 GOLGA6L9A6NEM1 432 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 E7EWF7 191 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 LRRN4CLQ8ND94 238 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 BBXQ8WY36 941 aaPredicted RBP18.05■□□□□ 0.48
GPN1-212ENST00000616939 SEC62Q99442 399 aaKnown RBP18.05■□□□□ 0.48
GPN1-212ENST00000616939 TUBE1Q9UJT0 475 aa18.05■□□□□ 0.48
GPN1-212ENST00000616939 A0A1B0GVL5 298 aa18.04■□□□□ 0.48
GPN1-212ENST00000616939 SPTLC2O15270 562 aa18.04■□□□□ 0.48
GPN1-212ENST00000616939 ZSCAN12O43309 604 aa18.04■□□□□ 0.48
GPN1-212ENST00000616939 FDPSP14324 419 aaKnown RBP18.04■□□□□ 0.48
GPN1-212ENST00000616939 CMA1P23946 247 aa18.04■□□□□ 0.48
GPN1-212ENST00000616939 MUM1L1Q5H9M0 696 aa18.04■□□□□ 0.48
GPN1-212ENST00000616939 TXLNBQ8N3L3 684 aa18.04■□□□□ 0.48
GPN1-212ENST00000616939 KLHDC4Q8TBB5 520 aa18.04■□□□□ 0.48
GPN1-212ENST00000616939 MPHOSPH8Q99549 860 aa18.04■□□□□ 0.48
GPN1-212ENST00000616939 REXO1L1PQ8IX06 675 aa18.03■□□□□ 0.48
GPN1-212ENST00000616939 MNS1Q8NEH6 495 aa18.03■□□□□ 0.48
GPN1-212ENST00000616939 DBNDD2Q9BQY9 259 aa18.03■□□□□ 0.48
GPN1-212ENST00000616939 ECM29Q5VYK3 1845 aa18.02■□□□□ 0.48
GPN1-212ENST00000616939 FAM237AA0A1B0GTK4 181 aa18.02■□□□□ 0.48
GPN1-212ENST00000616939 ZNF202O95125 648 aa18.02■□□□□ 0.48
GPN1-212ENST00000616939 CCT2P78371 535 aaKnown RBP18.02■□□□□ 0.48
GPN1-212ENST00000616939 SF3A1Q15459 793 aaKnown RBP18.02■□□□□ 0.48
GPN1-212ENST00000616939 MYSM1Q5VVJ2 828 aa18.02■□□□□ 0.48
GPN1-212ENST00000616939 HOMER1Q86YM7 354 aa18.02■□□□□ 0.48
GPN1-212ENST00000616939 DNAJC2Q99543 621 aaKnown RBP18.02■□□□□ 0.48
GPN1-212ENST00000616939 PHF8Q9UPP1 1060 aa18.02■□□□□ 0.48
GPN1-212ENST00000616939 PRAMEF22A3QJZ6 481 aa18.02■□□□□ 0.47
GPN1-212ENST00000616939 FOSBP53539 338 aa18.02■□□□□ 0.47
GPN1-212ENST00000616939 AXDND1Q5T1B0 1012 aaPredicted RBP18.02■□□□□ 0.47
GPN1-212ENST00000616939 VSTM4Q8IW00 320 aa18.02■□□□□ 0.47
GPN1-212ENST00000616939 ANKRD24Q8TF21 1146 aa18.02■□□□□ 0.47
GPN1-212ENST00000616939 HSD3B7Q9H2F3 369 aa18.02■□□□□ 0.47
GPN1-212ENST00000616939 DHX16O60231 1041 aaKnown RBP18.01■□□□□ 0.47
GPN1-212ENST00000616939 FBXO18Q8NFZ0 1043 aa18.01■□□□□ 0.47
GPN1-212ENST00000616939 C8orf76Q96K31 380 aa18.01■□□□□ 0.47
GPN1-212ENST00000616939 NCOA5Q9HCD5 579 aaKnown RBP18.01■□□□□ 0.47
GPN1-212ENST00000616939 CLIC4Q9Y696 253 aa18.01■□□□□ 0.47
GPN1-212ENST00000616939 PARP3Q9Y6F1 533 aa18.01■□□□□ 0.47
GPN1-212ENST00000616939 WDR19Q8NEZ3 1342 aa18.01■□□□□ 0.47
GPN1-212ENST00000616939 MYH7P12883 1935 aa18.01■□□□□ 0.47
GPN1-212ENST00000616939 ERICH4A6NGS2 130 aa18■□□□□ 0.47
GPN1-212ENST00000616939 ARHGAP6O43182 974 aa18■□□□□ 0.47
GPN1-212ENST00000616939 DDX46Q7L014 1031 aaKnown RBP18■□□□□ 0.47
GPN1-212ENST00000616939 GPR161Q8N6U8 529 aaKnown RBP18■□□□□ 0.47
GPN1-212ENST00000616939 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18■□□□□ 0.47
GPN1-212ENST00000616939 ERCC4Q92889 916 aaPredicted RBP18■□□□□ 0.47
GPN1-212ENST00000616939 MYD88Q99836 296 aa18■□□□□ 0.47
GPN1-212ENST00000616939 HSPD1P10809 573 aaKnown RBP18■□□□□ 0.47
GPN1-212ENST00000616939 MYL5Q02045 173 aa18■□□□□ 0.47
GPN1-212ENST00000616939 GUCY1B3Q02153 619 aa18■□□□□ 0.47
GPN1-212ENST00000616939 AIMP1Q12904 312 aaKnown RBP18■□□□□ 0.47
GPN1-212ENST00000616939 ANO1Q5XXA6 986 aa18■□□□□ 0.47
GPN1-212ENST00000616939 ELOA2Q8IYF1 753 aaPredicted RBP18■□□□□ 0.47
GPN1-212ENST00000616939 PAG1Q9NWQ8 432 aa18■□□□□ 0.47
GPN1-212ENST00000616939 TJP1Q07157 1748 aa18■□□□□ 0.47
GPN1-212ENST00000616939 PLEKHG2Q9H7P9 1386 aa17.99■□□□□ 0.47
GPN1-212ENST00000616939 MAP3K15Q6ZN16 1313 aa17.99■□□□□ 0.47
GPN1-212ENST00000616939 PFKFB1P16118 471 aa17.99■□□□□ 0.47
GPN1-212ENST00000616939 CDK11BP21127 795 aaKnown RBP17.99■□□□□ 0.47
GPN1-212ENST00000616939 JAKMIP3Q5VZ66 844 aa17.99■□□□□ 0.47
GPN1-212ENST00000616939 XAGE3Q8WTP9 111 aa17.99■□□□□ 0.47
GPN1-212ENST00000616939 BCL11BQ9C0K0 894 aaPredicted RBP17.99■□□□□ 0.47
GPN1-212ENST00000616939 HPSEQ9Y251 543 aa17.99■□□□□ 0.47
GPN1-212ENST00000616939 MAST3O60307 1309 aa17.98■□□□□ 0.47
GPN1-212ENST00000616939 NPHP1O15259 732 aa17.98■□□□□ 0.47
GPN1-212ENST00000616939 HNRNPH2P55795 449 aaKnown RBP17.98■□□□□ 0.47
GPN1-212ENST00000616939 RSRC2Q7L4I2 434 aaKnown RBP17.98■□□□□ 0.47
GPN1-212ENST00000616939 TMEM139Q8IV31 216 aa17.98■□□□□ 0.47
GPN1-212ENST00000616939 LRRC59Q96AG4 307 aaKnown RBP17.98■□□□□ 0.47
GPN1-212ENST00000616939 PSD3Q9NYI0 1048 aa17.98■□□□□ 0.47
GPN1-212ENST00000616939 NUP188Q5SRE5 1749 aa17.98■□□□□ 0.47
GPN1-212ENST00000616939 PARP4Q9UKK3 1724 aaKnown RBP17.98■□□□□ 0.47
GPN1-212ENST00000616939 RNF113AO15541 343 aaKnown RBP17.98■□□□□ 0.47
GPN1-212ENST00000616939 PPP6R2O75170 966 aa17.98■□□□□ 0.47
GPN1-212ENST00000616939 CASP7P55210 303 aa17.98■□□□□ 0.47
GPN1-212ENST00000616939 UBASH3AP57075 661 aa17.98■□□□□ 0.47
GPN1-212ENST00000616939 KIF23Q02241 960 aaPredicted RBP17.98■□□□□ 0.47
GPN1-212ENST00000616939 GPS2Q13227 327 aa17.98■□□□□ 0.47
GPN1-212ENST00000616939 SLC39A14Q15043 492 aa17.98■□□□□ 0.47
GPN1-212ENST00000616939 CC2D1AQ6P1N0 951 aaPredicted RBP17.98■□□□□ 0.47
GPN1-212ENST00000616939 LRP10Q7Z4F1 713 aa17.98■□□□□ 0.47
GPN1-212ENST00000616939 CARD6Q9BX69 1037 aa17.98■□□□□ 0.47
GPN1-212ENST00000616939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.97■□□□□ 0.47
GPN1-212ENST00000616939 VWA3AA6NCI4 1184 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms