RNA–Protein interactions for RNA: ENST00000616657.1

CNTNAP3P1-201, Transcript of contactin associated protein-like 3 pseudogene 1, humanhuman

BASIC

Gene CNTNAP3P1, Length 906 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3P1-201ENST00000616657 HOXB7P09629 217 aa8.43□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 NPR1P16066 1061 aa8.43□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 FKBP4Q02790 459 aaKnown RBP eCLIP8.43□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 HDAC1Q13547 482 aaPredicted RBP8.43□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 TAF7Q15545 349 aaPredicted RBP8.43□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 OLFM4Q6UX06 510 aa8.43□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 RWDD1Q9H446 243 aaPredicted RBP8.43□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 TAF1DQ9H5J8 278 aaPredicted RBP8.43□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 ZBTB40Q9NUA8 1239 aa8.43□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 NIP7Q9Y221 180 aaKnown RBP eCLIP8.43□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 PCDHB15Q9Y5E8 787 aa8.43□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 TMEM88BA6NKF7 163 aa8.42□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 SNRPA1P09661 255 aaKnown RBP8.42□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 GTF2E1P29083 439 aaPredicted RBP8.42□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 KRT24Q2M2I5 525 aa8.42□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 REPIN1Q9BWE0 567 aaKnown RBP8.42□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 SEPT9Q9UHD8 586 aaPredicted RBP8.42□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 HACL1Q9UJ83 578 aa8.42□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 ABT1Q9ULW3 272 aaKnown RBP8.42□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 PASKQ96RG2 1323 aa8.42□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 CASP8AP2Q9UKL3 1982 aa8.41□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 EPHX2P34913 555 aa8.41□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 IARSP41252 1262 aaKnown RBP8.41□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 CTCFP49711 727 aaPredicted RBP8.41□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 BCAMP50895 628 aa8.41□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 GRM1Q13255 1194 aa8.41□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 SH3D19Q5HYK7 790 aa8.41□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 INTS3Q68E01 1043 aaKnown RBP8.41□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 ANKK1Q8NFD2 765 aa8.41□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 CHMP4AQ9BY43 222 aa8.41□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 MIS18AQ9NYP9 233 aa8.41□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 USP16Q9Y5T5 823 aa8.41□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 RIC1Q4ADV7 1423 aa8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 ZBTB7BO15156 539 aaPredicted RBP8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 LMOD1P29536 600 aaPredicted RBP8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 VEGFBP49765 207 aa8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 CCDC30Q5VVM6 783 aa8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 MAP1SQ66K74 1059 aaPredicted RBP8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 CLEC4GQ6UXB4 293 aa8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 TPTE2Q6XPS3 522 aa8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 KIF6Q6ZMV9 814 aa8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 RTKN2Q8IZC4 609 aa8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 RPGRQ92834 1020 aaKnown RBP8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 BEGAINQ9BUH8 593 aa8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 STK31Q9BXU1 1019 aa8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 GJA3Q9Y6H8 435 aa8.4□□□□□ -1.06
CNTNAP3P1-201ENST00000616657 LRRC37AA6NMS7 1700 aa8.4□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 SNED1Q8TER0 1413 aa8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 AKAP11Q9UKA4 1901 aa8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 SPEF2Q9C093 1822 aa8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 LBX1P52954 281 aa8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 EIF4A1P60842 406 aaKnown RBP8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 NBPF10Q6P3W6 841 aaKnown RBP8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 SLF2Q8IX21 1173 aa8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 NBPF15Q8N660 670 aa8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 JDP2Q8WYK2 163 aa8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 ZFRQ96KR1 1074 aaKnown RBP8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 NYXQ9GZU5 481 aa8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 PRDM10Q9NQV6 1147 aa8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 POLR2AP24928 1970 aaKnown RBP8.39□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 IBTKQ9P2D0 1353 aaPredicted RBP8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 CD46P15529 392 aa8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 GPTP24298 496 aa8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 EIF6P56537 245 aaKnown RBP8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 HLFQ16534 295 aa8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 PNMA8AQ86V59 439 aaPredicted RBP8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 SMC5Q8IY18 1101 aa8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 CNTROBQ8N137 903 aa8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 GPC2Q8N158 579 aa8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 SYNE4Q8N205 404 aa8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 C7orf43Q8WVR3 580 aa8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 PCMTD1Q96MG8 357 aaPredicted RBP8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 BACH2Q9BYV9 841 aa8.38□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 SOWAHBA6NEL2 793 aa8.37□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 RASSF10A6NK89 507 aa8.37□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 PPEF1O14829 653 aaPredicted RBP8.37□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 HSPA8P11142 646 aaKnown RBP8.37□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 ALDH1B1P30837 517 aa8.37□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 CCT4P50991 539 aaKnown RBP8.37□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 HDGFL1Q5TGJ6 251 aa8.37□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 SLC51AQ86UW1 340 aa8.37□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 SKAP1Q86WV1 359 aa8.37□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 LARGE2Q8N3Y3 721 aa8.37□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 ZBTB3Q9H5J0 574 aa8.37□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 MAP3K15Q6ZN16 1313 aa8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 UBN2Q6ZU65 1347 aa8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 WDR33Q9C0J8 1336 aaKnown RBP8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 FZD9O00144 591 aa8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 PPIP5K2O43314 1243 aa8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 ITGBL1O95965 494 aaPredicted RBP8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 MYL6BP14649 208 aa8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 USP46P62068 366 aa8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 FLIIQ13045 1269 aa8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 NIM1KQ8IY84 436 aa8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 NLRP7Q8WX94 980 aa8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 GCC1Q96CN9 775 aa8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 PSMD1Q99460 953 aa8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 PSME4Q14997 1843 aa8.36□□□□□ -1.07
CNTNAP3P1-201ENST00000616657 DUOX1Q9NRD9 1551 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms