RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 AIFM3Q96NN9 605 aa15.21■□□□□ 0.03
MSH6-214ENST00000616033 WASHC4Q2M389 1173 aa15.21■□□□□ 0.02
MSH6-214ENST00000616033 KSR2Q6VAB6 950 aa15.21■□□□□ 0.02
MSH6-214ENST00000616033 CCDC12Q8WUD4 166 aaPredicted RBP15.21■□□□□ 0.02
MSH6-214ENST00000616033 HMG20BQ9P0W2 317 aa15.21■□□□□ 0.02
MSH6-214ENST00000616033 SPTLC2O15270 562 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 FKBP4Q02790 459 aaKnown RBP eCLIP15.2■□□□□ 0.02
MSH6-214ENST00000616033 ZNF827Q17R98 1081 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 TRMT44Q8IYL2 757 aaKnown RBP15.2■□□□□ 0.02
MSH6-214ENST00000616033 DDX17Q92841 729 aaKnown RBP15.2■□□□□ 0.02
MSH6-214ENST00000616033 KAZALD1Q96I82 304 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 ARHGEF10O15013 1369 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 ENGASEQ8NFI3 743 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 ARFGAP3Q9NP61 516 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 FANCGO15287 622 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 BRD2P25440 801 aaKnown RBP15.2■□□□□ 0.02
MSH6-214ENST00000616033 MCMDC2Q4G0Z9 681 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 C1orf141Q5JVX7 400 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 DHX32Q7L7V1 743 aaKnown RBP15.2■□□□□ 0.02
MSH6-214ENST00000616033 FMR1NBQ8N0W7 255 aaPredicted RBP15.2■□□□□ 0.02
MSH6-214ENST00000616033 CCDC82Q8N4S0 544 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 FAM212AQ96EL1 285 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 CLIC6Q96NY7 704 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 ORAI2Q96SN7 254 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 SUGCTQ9HAC7 445 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 FANCLQ9NW38 375 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 ZNF330Q9Y3S2 320 aaPredicted RBP15.2■□□□□ 0.02
MSH6-214ENST00000616033 COL15A1P39059 1388 aa15.2■□□□□ 0.02
MSH6-214ENST00000616033 NPHP4O75161 1426 aaPredicted RBP15.2■□□□□ 0.02
MSH6-214ENST00000616033 RHOXF2BP0C7M4 288 aa15.19■□□□□ 0.02
MSH6-214ENST00000616033 NEXNQ0ZGT2 675 aa15.19■□□□□ 0.02
MSH6-214ENST00000616033 RHOXF2Q9BQY4 288 aa15.19■□□□□ 0.02
MSH6-214ENST00000616033 PLEKHG1Q9ULL1 1385 aa15.19■□□□□ 0.02
MSH6-214ENST00000616033 PPP2R3AQ06190 1150 aa15.19■□□□□ 0.02
MSH6-214ENST00000616033 ILDR1Q86SU0 546 aaPredicted RBP15.19■□□□□ 0.02
MSH6-214ENST00000616033 KCNB2Q92953 911 aa15.19■□□□□ 0.02
MSH6-214ENST00000616033 HINFPQ9BQA5 517 aa15.19■□□□□ 0.02
MSH6-214ENST00000616033 RABEP2Q9H5N1 569 aa15.19■□□□□ 0.02
MSH6-214ENST00000616033 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
MSH6-214ENST00000616033 SBNO1A3KN83 1393 aa15.18■□□□□ 0.02
MSH6-214ENST00000616033 CCDC102AQ96A19 550 aa15.18■□□□□ 0.02
MSH6-214ENST00000616033 PARD6BQ9BYG5 372 aa15.18■□□□□ 0.02
MSH6-214ENST00000616033 L2HGDHQ9H9P8 463 aa15.18■□□□□ 0.02
MSH6-214ENST00000616033 RASSF4Q9H2L5 321 aa15.18■□□□□ 0.02
MSH6-214ENST00000616033 PLEKHG3A1L390 1219 aa15.18■□□□□ 0.02
MSH6-214ENST00000616033 GOLGA8BA8MQT2 603 aa15.18■□□□□ 0.02
MSH6-214ENST00000616033 PFKFB1P16118 471 aa15.18■□□□□ 0.02
MSH6-214ENST00000616033 KLHL10Q6JEL2 608 aa15.18■□□□□ 0.02
MSH6-214ENST00000616033 COBLO75128 1261 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 HSPA2P54652 639 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 MTF1Q14872 753 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 DHX58Q96C10 678 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 GDAP1L1Q96MZ0 367 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 OSBPL5Q9H0X9 879 aaPredicted RBP15.17■□□□□ 0.02
MSH6-214ENST00000616033 KLF18A0A0U1RQI7 1052 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 PFKFB2O60825 505 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 SYKP43405 635 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 TOGARAM2Q6ZUX3 1019 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 COPS6Q7L5N1 327 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 TXLNBQ8N3L3 684 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 USP6P35125 1406 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 TADA3O75528 432 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 TBC1D8O95759 1140 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 PDIA3P30101 505 aaKnown RBP15.17■□□□□ 0.02
MSH6-214ENST00000616033 PDE11AQ9HCR9 933 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 PPP2R2CQ9Y2T4 447 aa15.17■□□□□ 0.02
MSH6-214ENST00000616033 E7EWF7 191 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 MYO1CO00159 1063 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 FOXN1O15353 648 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 DDX58O95786 925 aaKnown RBP15.16■□□□□ 0.02
MSH6-214ENST00000616033 ADALQ6DHV7 355 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 CC2D1AQ6P1N0 951 aaPredicted RBP15.16■□□□□ 0.02
MSH6-214ENST00000616033 XAGE3Q8WTP9 111 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 PHF8Q9UPP1 1060 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 A0A0U1RQJ8 604 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 PSDA5PKW4 1024 aaPredicted RBP15.16■□□□□ 0.02
MSH6-214ENST00000616033 N4BP1O75113 896 aaKnown RBP15.16■□□□□ 0.02
MSH6-214ENST00000616033 LRRFIP1Q32MZ4 808 aaKnown RBP15.16■□□□□ 0.02
MSH6-214ENST00000616033 LONRF3Q496Y0 759 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 CCDC93Q567U6 631 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 TNNI3KQ59H18 835 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 OLFM4Q6UX06 510 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 PROSER2Q86WR7 435 aaPredicted RBP15.16■□□□□ 0.02
MSH6-214ENST00000616033 LINC00301Q8NCQ3 95 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 ATRIPQ8WXE1 791 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 IMPACTQ9P2X3 320 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 ADAM21Q9UKJ8 722 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 FPGT-TNNI3KV9GXZ4 949 aa15.16■□□□□ 0.02
MSH6-214ENST00000616033 FOXR1Q6PIV2 292 aa15.15■□□□□ 0.02
MSH6-214ENST00000616033 BANK1Q8NDB2 785 aa15.15■□□□□ 0.02
MSH6-214ENST00000616033 LINS1Q8NG48 757 aa15.15■□□□□ 0.02
MSH6-214ENST00000616033 AK7Q96M32 723 aa15.15■□□□□ 0.02
MSH6-214ENST00000616033 SRRTQ9BXP5 876 aaKnown RBP15.15■□□□□ 0.02
MSH6-214ENST00000616033 PARP3Q9Y6F1 533 aa15.15■□□□□ 0.02
MSH6-214ENST00000616033 DLC1Q96QB1 1528 aa15.15■□□□□ 0.02
MSH6-214ENST00000616033 USP42Q9H9J4 1324 aaKnown RBP15.15■□□□□ 0.02
MSH6-214ENST00000616033 NLRP12P59046 1061 aa15.15■□□□□ 0.02
MSH6-214ENST00000616033 NAA16Q6N069 864 aaPredicted RBP15.15■□□□□ 0.02
MSH6-214ENST00000616033 ALDH1L1O75891 902 aa15.15■□□□□ 0.02
MSH6-214ENST00000616033 TRIM65Q6PJ69 517 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms