RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 SASH1O94885 1247 aa13.35□□□□□ -0.27
COL4A1-205ENST00000615732 RGS3P49796 1198 aa13.35□□□□□ -0.27
COL4A1-205ENST00000615732 CCT4P50991 539 aaKnown RBP13.35□□□□□ -0.27
COL4A1-205ENST00000615732 FKBP1BP68106 108 aa13.35□□□□□ -0.27
COL4A1-205ENST00000615732 FKBP5Q13451 457 aaPredicted RBP13.35□□□□□ -0.27
COL4A1-205ENST00000615732 HDAC1Q13547 482 aaPredicted RBP13.35□□□□□ -0.27
COL4A1-205ENST00000615732 PRAMEF18Q5VWM3 479 aa13.35□□□□□ -0.27
COL4A1-205ENST00000615732 INTS3Q68E01 1043 aaKnown RBP13.35□□□□□ -0.27
COL4A1-205ENST00000615732 CTU1Q7Z7A3 348 aaKnown RBP13.35□□□□□ -0.27
COL4A1-205ENST00000615732 TXNRD3Q86VQ6 643 aa13.35□□□□□ -0.27
COL4A1-205ENST00000615732 PDE4DIPQ5VU43 2346 aa13.34□□□□□ -0.27
COL4A1-205ENST00000615732 ITGA6P23229 1130 aa13.34□□□□□ -0.27
COL4A1-205ENST00000615732 IGHMBP2P38935 993 aaKnown RBP13.34□□□□□ -0.27
COL4A1-205ENST00000615732 GCKRQ14397 625 aa13.34□□□□□ -0.27
COL4A1-205ENST00000615732 NBPF9Q3BBW0 867 aa13.34□□□□□ -0.27
COL4A1-205ENST00000615732 DACT2Q5SW24 774 aa13.34□□□□□ -0.27
COL4A1-205ENST00000615732 PODNQ7Z5L7 613 aa13.34□□□□□ -0.27
COL4A1-205ENST00000615732 MYH3P11055 1940 aa13.33□□□□□ -0.28
COL4A1-205ENST00000615732 H7C1W4 665 aa13.33□□□□□ -0.28
COL4A1-205ENST00000615732 ZBTB7BO15156 539 aaPredicted RBP13.33□□□□□ -0.28
COL4A1-205ENST00000615732 CASP7P55210 303 aa13.33□□□□□ -0.28
COL4A1-205ENST00000615732 SLC4A10Q6U841 1118 aa13.33□□□□□ -0.28
COL4A1-205ENST00000615732 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
COL4A1-205ENST00000615732 DNAAF4Q8WXU2 420 aa13.33□□□□□ -0.28
COL4A1-205ENST00000615732 UBE2Q2LH0YL09 131 aa13.32□□□□□ -0.28
COL4A1-205ENST00000615732 SNAP23O00161 211 aa13.32□□□□□ -0.28
COL4A1-205ENST00000615732 SKAP1Q86WV1 359 aa13.32□□□□□ -0.28
COL4A1-205ENST00000615732 C1orf115Q9H7X2 142 aa13.32□□□□□ -0.28
COL4A1-205ENST00000615732 HPS5Q9UPZ3 1129 aa13.32□□□□□ -0.28
COL4A1-205ENST00000615732 ZNF804BA4D1E1 1349 aa13.32□□□□□ -0.28
COL4A1-205ENST00000615732 F6X3S4 739 aa13.31□□□□□ -0.28
COL4A1-205ENST00000615732 TBC1D8O95759 1140 aa13.31□□□□□ -0.28
COL4A1-205ENST00000615732 KCNJ4P48050 445 aa13.31□□□□□ -0.28
COL4A1-205ENST00000615732 MKRN3Q13064 507 aaKnown RBP13.31□□□□□ -0.28
COL4A1-205ENST00000615732 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
COL4A1-205ENST00000615732 KIAA0825Q8IV33 1275 aa13.31□□□□□ -0.28
COL4A1-205ENST00000615732 ZNF296Q8WUU4 475 aaPredicted RBP13.31□□□□□ -0.28
COL4A1-205ENST00000615732 MPHOSPH8Q99549 860 aa13.31□□□□□ -0.28
COL4A1-205ENST00000615732 PLA2G12BQ9BX93 195 aa13.31□□□□□ -0.28
COL4A1-205ENST00000615732 COA1Q9GZY4 146 aa13.31□□□□□ -0.28
COL4A1-205ENST00000615732 CHMP3Q9Y3E7 222 aa13.31□□□□□ -0.28
COL4A1-205ENST00000615732 WNT10BO00744 389 aa13.3□□□□□ -0.28
COL4A1-205ENST00000615732 CHRNDQ07001 517 aa13.3□□□□□ -0.28
COL4A1-205ENST00000615732 PRKG1Q13976 671 aa13.3□□□□□ -0.28
COL4A1-205ENST00000615732 STRIP1Q5VSL9 837 aa13.3□□□□□ -0.28
COL4A1-205ENST00000615732 OGFOD1Q8N543 542 aa13.3□□□□□ -0.28
COL4A1-205ENST00000615732 HELBQ8NG08 1087 aaPredicted RBP13.3□□□□□ -0.28
COL4A1-205ENST00000615732 HTTP42858 3142 aa13.29□□□□□ -0.28
COL4A1-205ENST00000615732 TAF5LO75529 589 aa13.29□□□□□ -0.28
COL4A1-205ENST00000615732 PDE4AP27815 886 aa13.29□□□□□ -0.28
COL4A1-205ENST00000615732 GTF2IP78347 998 aa13.29□□□□□ -0.28
COL4A1-205ENST00000615732 TTLL5Q6EMB2 1281 aa13.29□□□□□ -0.28
COL4A1-205ENST00000615732 LINS1Q8NG48 757 aa13.29□□□□□ -0.28
COL4A1-205ENST00000615732 PCDH10Q9P2E7 1040 aa13.29□□□□□ -0.28
COL4A1-205ENST00000615732 JAG2Q9Y219 1238 aa13.29□□□□□ -0.28
COL4A1-205ENST00000615732 LEMD3Q9Y2U8 911 aa13.29□□□□□ -0.28
COL4A1-205ENST00000615732 MYO3BQ8WXR4 1341 aa13.29□□□□□ -0.28
COL4A1-205ENST00000615732 ANKRD18BA2A2Z9 1011 aa13.28□□□□□ -0.28
COL4A1-205ENST00000615732 CSF1RP07333 972 aa13.28□□□□□ -0.28
COL4A1-205ENST00000615732 PRPF38BQ5VTL8 546 aaKnown RBP13.28□□□□□ -0.28
COL4A1-205ENST00000615732 ANKRD2Q9GZV1 360 aa13.28□□□□□ -0.28
COL4A1-205ENST00000615732 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.28□□□□□ -0.28
COL4A1-205ENST00000615732 HDAC9Q9UKV0 1011 aa13.28□□□□□ -0.28
COL4A1-205ENST00000615732 FZD1Q9UP38 647 aa13.28□□□□□ -0.28
COL4A1-205ENST00000615732 PCDHAC2Q9Y5I4 1007 aa13.28□□□□□ -0.28
COL4A1-205ENST00000615732 F8W031 263 aaPredicted RBP13.27□□□□□ -0.29
COL4A1-205ENST00000615732 GPR25O00155 361 aa13.27□□□□□ -0.29
COL4A1-205ENST00000615732 TM4SF4P48230 202 aa13.27□□□□□ -0.29
COL4A1-205ENST00000615732 PKN2Q16513 984 aaKnown RBP13.27□□□□□ -0.29
COL4A1-205ENST00000615732 EPHA10Q5JZY3 1008 aa13.27□□□□□ -0.29
COL4A1-205ENST00000615732 SMC5Q8IY18 1101 aa13.27□□□□□ -0.29
COL4A1-205ENST00000615732 CERS5Q8N5B7 392 aa13.27□□□□□ -0.29
COL4A1-205ENST00000615732 GCC1Q96CN9 775 aa13.27□□□□□ -0.29
COL4A1-205ENST00000615732 ZNF594Q96JF6 807 aaPredicted RBP13.27□□□□□ -0.29
COL4A1-205ENST00000615732 A0A1B0GUL6 1792 aa13.26□□□□□ -0.29
COL4A1-205ENST00000615732 SSC5DA1L4H1 1573 aa13.26□□□□□ -0.29
COL4A1-205ENST00000615732 GNAI3P08754 354 aa13.26□□□□□ -0.29
COL4A1-205ENST00000615732 NF2P35240 595 aa13.26□□□□□ -0.29
COL4A1-205ENST00000615732 FOXO4P98177 505 aa13.26□□□□□ -0.29
COL4A1-205ENST00000615732 PTPN12Q05209 780 aaKnown RBP13.26□□□□□ -0.29
COL4A1-205ENST00000615732 IFIT5Q13325 482 aaKnown RBP13.26□□□□□ -0.29
COL4A1-205ENST00000615732 BEND3Q5T5X7 828 aa13.26□□□□□ -0.29
COL4A1-205ENST00000615732 APOBEC3FQ8IUX4 373 aaKnown RBP13.26□□□□□ -0.29
COL4A1-205ENST00000615732 MEIS3Q99687 375 aa13.26□□□□□ -0.29
COL4A1-205ENST00000615732 BACH2Q9BYV9 841 aa13.26□□□□□ -0.29
COL4A1-205ENST00000615732 R3HDMLQ9H3Y0 253 aa13.26□□□□□ -0.29
COL4A1-205ENST00000615732 CD209Q9NNX6 404 aa13.26□□□□□ -0.29
COL4A1-205ENST00000615732 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
COL4A1-205ENST00000615732 IRS2Q9Y4H2 1338 aa13.26□□□□□ -0.29
COL4A1-205ENST00000615732 LAMB1P07942 1786 aa13.25□□□□□ -0.29
COL4A1-205ENST00000615732 AOX1Q06278 1338 aa13.25□□□□□ -0.29
COL4A1-205ENST00000615732 HMMRO75330 724 aa13.25□□□□□ -0.29
COL4A1-205ENST00000615732 GNAI2P04899 355 aa13.25□□□□□ -0.29
COL4A1-205ENST00000615732 SREBF2Q12772 1141 aa13.25□□□□□ -0.29
COL4A1-205ENST00000615732 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
COL4A1-205ENST00000615732 LMBR1LQ6UX01 489 aa13.25□□□□□ -0.29
COL4A1-205ENST00000615732 RPAP2Q8IXW5 612 aaPredicted RBP13.25□□□□□ -0.29
COL4A1-205ENST00000615732 ZBED3Q96IU2 234 aaPredicted RBP13.25□□□□□ -0.29
COL4A1-205ENST00000615732 CFHR5Q9BXR6 569 aa13.25□□□□□ -0.29
COL4A1-205ENST00000615732 COL1A1P02452 1464 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms