RNA–Protein interactions for RNA: ENST00000615024.4

RDM1-217, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 617 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-217ENST00000615024 ECM1Q16610 540 aa5.3□□□□□ -1.56
RDM1-217ENST00000615024 PUS10Q3MIT2 529 aaKnown RBP5.3□□□□□ -1.56
RDM1-217ENST00000615024 BLOC1S3Q6QNY0 202 aa5.3□□□□□ -1.56
RDM1-217ENST00000615024 SMIM5Q71RC9 77 aa5.3□□□□□ -1.56
RDM1-217ENST00000615024 PNMA8AQ86V59 439 aaPredicted RBP5.3□□□□□ -1.56
RDM1-217ENST00000615024 DNAJC10Q8IXB1 793 aa5.3□□□□□ -1.56
RDM1-217ENST00000615024 JDP2Q8WYK2 163 aa5.3□□□□□ -1.56
RDM1-217ENST00000615024 FMNL2Q96PY5 1086 aa5.3□□□□□ -1.56
RDM1-217ENST00000615024 BRIP1Q9BX63 1249 aa5.3□□□□□ -1.56
RDM1-217ENST00000615024 PANK3Q9H999 370 aa5.3□□□□□ -1.56
RDM1-217ENST00000615024 DLEC1Q9Y238 1755 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 SOS1Q07889 1333 aaPredicted RBP5.29□□□□□ -1.56
RDM1-217ENST00000615024 PER1O15534 1290 aaPredicted RBP5.29□□□□□ -1.56
RDM1-217ENST00000615024 FBXO45P0C2W1 286 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 ATP2B4P23634 1241 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 ECE1P42892 770 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 CTCFP49711 727 aaPredicted RBP5.29□□□□□ -1.56
RDM1-217ENST00000615024 RASSF7Q02833 373 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 DDR1Q08345 913 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 NFIXQ14938 502 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 SWI5Q1ZZU3 235 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 CCDC93Q567U6 631 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 EAPPQ56P03 285 aaPredicted RBP5.29□□□□□ -1.56
RDM1-217ENST00000615024 NAALADL2Q58DX5 795 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 STYK1Q6J9G0 422 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 NBPF5PQ86XG9 351 aaPredicted RBP5.29□□□□□ -1.56
RDM1-217ENST00000615024 EMID1Q96A84 441 aaPredicted RBP5.29□□□□□ -1.56
RDM1-217ENST00000615024 MASTLQ96GX5 879 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 PRKD2Q9BZL6 878 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 EGFL7Q9UHF1 273 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 ABT1Q9ULW3 272 aaKnown RBP5.29□□□□□ -1.56
RDM1-217ENST00000615024 PCDHB3Q9Y5E6 796 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 SRCAPQ6ZRS2 3230 aa5.29□□□□□ -1.56
RDM1-217ENST00000615024 VIRMAQ69YN4 1812 aaKnown RBP5.29□□□□□ -1.56
RDM1-217ENST00000615024 KDM6AO15550 1401 aaPredicted RBP5.29□□□□□ -1.56
RDM1-217ENST00000615024 TJP1Q07157 1748 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 KIAA1551Q9HCM1 1747 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 AFDNP55196 1824 aaKnown RBP5.28□□□□□ -1.56
RDM1-217ENST00000615024 MYH14Q7Z406 1995 aaKnown RBP5.28□□□□□ -1.56
RDM1-217ENST00000615024 GNAT3A8MTJ3 354 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 RNMTO43148 476 aaKnown RBP5.28□□□□□ -1.56
RDM1-217ENST00000615024 C21orf2O43822 256 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 HMOX1P09601 288 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 CYP19A1P11511 503 aaPredicted RBP5.28□□□□□ -1.56
RDM1-217ENST00000615024 ALDH1B1P30837 517 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 SCNN1AP37088 669 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 IL6STP40189 918 aaPredicted RBP5.28□□□□□ -1.56
RDM1-217ENST00000615024 EIF6P56537 245 aaKnown RBP5.28□□□□□ -1.56
RDM1-217ENST00000615024 MAP2K1Q02750 393 aaPredicted RBP5.28□□□□□ -1.56
RDM1-217ENST00000615024 LDLRAD1Q5T700 205 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 TPTE2Q6XPS3 522 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 AMIGO3Q86WK7 504 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 LDHDQ86WU2 507 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 RTKN2Q8IZC4 609 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 NYXQ9GZU5 481 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 MKRN1Q9UHC7 482 aaKnown RBP5.28□□□□□ -1.56
RDM1-217ENST00000615024 HACL1Q9UJ83 578 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 ZBTB1Q9Y2K1 713 aa5.28□□□□□ -1.56
RDM1-217ENST00000615024 V9GY48 417 aaPredicted RBP5.28□□□□□ -1.56
RDM1-217ENST00000615024 DICER1Q9UPY3 1922 aaKnown RBP5.28□□□□□ -1.56
RDM1-217ENST00000615024 SCN4AP35499 1836 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 LTBP3Q9NS15 1303 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 TLL1O43897 1013 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 DKK1O94907 266 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 HSPA5P11021 654 aaKnown RBP5.27□□□□□ -1.57
RDM1-217ENST00000615024 NPR1P16066 1061 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 TM4SF1P30408 202 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 HTRA3P83110 453 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 SLC39A6Q13433 755 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 CACNA1SQ13698 1873 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 MRPL58Q14197 206 aaKnown RBP5.27□□□□□ -1.57
RDM1-217ENST00000615024 COL19A1Q14993 1142 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 SF3A1Q15459 793 aaKnown RBP5.27□□□□□ -1.57
RDM1-217ENST00000615024 MORN1Q5T089 497 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 COL13A1Q5TAT6 717 aaPredicted RBP5.27□□□□□ -1.57
RDM1-217ENST00000615024 CC2D2BQ6DHV5 1058 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 INTS5Q6P9B9 1019 aaKnown RBP5.27□□□□□ -1.57
RDM1-217ENST00000615024 KIF6Q6ZMV9 814 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 TAS1R3Q7RTX0 852 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 DZIP3Q86Y13 1208 aaKnown RBP5.27□□□□□ -1.57
RDM1-217ENST00000615024 ANKMY2Q8IV38 441 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 DNAJC5GQ8N7S2 189 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 RPGRQ92834 1020 aaKnown RBP5.27□□□□□ -1.57
RDM1-217ENST00000615024 ASB16Q96NS5 453 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 PNNQ9H307 717 aaKnown RBP5.27□□□□□ -1.57
RDM1-217ENST00000615024 SLC27A5Q9Y2P5 690 aa5.27□□□□□ -1.57
RDM1-217ENST00000615024 MRC1P22897 1456 aa5.26□□□□□ -1.57
RDM1-217ENST00000615024 BTBD11A6QL63 1104 aa5.26□□□□□ -1.57
RDM1-217ENST00000615024 RNF223E7ERA6 249 aa5.26□□□□□ -1.57
RDM1-217ENST00000615024 C6orf229H3BNL8 230 aa5.26□□□□□ -1.57
RDM1-217ENST00000615024 SKIP12755 728 aa5.26□□□□□ -1.57
RDM1-217ENST00000615024 KCNA3P22001 575 aa5.26□□□□□ -1.57
RDM1-217ENST00000615024 IL13P35225 146 aa5.26□□□□□ -1.57
RDM1-217ENST00000615024 CNGB1Q14028 1251 aaPredicted RBP5.26□□□□□ -1.57
RDM1-217ENST00000615024 OCLNQ16625 522 aa5.26□□□□□ -1.57
RDM1-217ENST00000615024 PRPF40BQ6NWY9 871 aaKnown RBP5.26□□□□□ -1.57
RDM1-217ENST00000615024 GIMAP6Q6P9H5 292 aa5.26□□□□□ -1.57
RDM1-217ENST00000615024 ZNF790Q6PG37 636 aa5.26□□□□□ -1.57
RDM1-217ENST00000615024 CLEC4GQ6UXB4 293 aa5.26□□□□□ -1.57
RDM1-217ENST00000615024 PHTF2Q8N3S3 785 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms