RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 BICC1Q9H694 974 aaKnown RBP25.76■■□□□ 1.71
POLR2J3-220ENST00000613744 CALCOCO1Q9P1Z2 691 aa25.76■■□□□ 1.71
POLR2J3-220ENST00000613744 ABCC12Q96J65 1359 aa25.76■■□□□ 1.71
POLR2J3-220ENST00000613744 PNMA6EA0A0J9YXQ4 647 aa25.76■■□□□ 1.71
POLR2J3-220ENST00000613744 NEMFO60524 1076 aa25.76■■□□□ 1.71
POLR2J3-220ENST00000613744 ZSCAN31Q96LW9 406 aaPredicted RBP25.76■■□□□ 1.71
POLR2J3-220ENST00000613744 MTFR1LQ9H019 292 aa25.76■■□□□ 1.71
POLR2J3-220ENST00000613744 MRVI1Q9Y6F6 885 aa25.76■■□□□ 1.71
POLR2J3-220ENST00000613744 CAVIN2O95810 425 aa25.75■■□□□ 1.71
POLR2J3-220ENST00000613744 TYRO3Q06418 890 aa25.75■■□□□ 1.71
POLR2J3-220ENST00000613744 RNF20Q5VTR2 975 aa25.75■■□□□ 1.71
POLR2J3-220ENST00000613744 C16orf45Q96MC5 204 aaPredicted RBP25.75■■□□□ 1.71
POLR2J3-220ENST00000613744 NUP62CLQ9H1M0 184 aa25.75■■□□□ 1.71
POLR2J3-220ENST00000613744 ZNF75DP51815 510 aa25.75■■□□□ 1.71
POLR2J3-220ENST00000613744 TDRD7Q8NHU6 1098 aaKnown RBP25.75■■□□□ 1.71
POLR2J3-220ENST00000613744 IPO4Q8TEX9 1081 aaKnown RBP25.75■■□□□ 1.71
POLR2J3-220ENST00000613744 SH2B1Q9NRF2 756 aaPredicted RBP25.75■■□□□ 1.71
POLR2J3-220ENST00000613744 MTMR6Q9Y217 621 aa25.75■■□□□ 1.71
POLR2J3-220ENST00000613744 SRCAPQ6ZRS2 3230 aa25.75■■□□□ 1.71
POLR2J3-220ENST00000613744 CDK11BP21127 795 aaKnown RBP25.74■■□□□ 1.71
POLR2J3-220ENST00000613744 SNX14Q9Y5W7 946 aa25.74■■□□□ 1.71
POLR2J3-220ENST00000613744 AK2P54819 239 aa25.73■■□□□ 1.71
POLR2J3-220ENST00000613744 C3orf67Q6ZVT6 689 aa25.73■■□□□ 1.71
POLR2J3-220ENST00000613744 ATP8B2P98198 1209 aa25.73■■□□□ 1.71
POLR2J3-220ENST00000613744 RBM43Q6ZSC3 357 aaKnown RBP25.73■■□□□ 1.71
POLR2J3-220ENST00000613744 RUFY3Q7L099 469 aa25.73■■□□□ 1.71
POLR2J3-220ENST00000613744 CHMP3Q9Y3E7 222 aa25.73■■□□□ 1.71
POLR2J3-220ENST00000613744 SRGAP3O43295 1099 aa25.72■■□□□ 1.71
POLR2J3-220ENST00000613744 FOXO4P98177 505 aa25.72■■□□□ 1.71
POLR2J3-220ENST00000613744 HDAC5Q9UQL6 1122 aa25.72■■□□□ 1.71
POLR2J3-220ENST00000613744 EXOC6BQ9Y2D4 811 aa25.72■■□□□ 1.71
POLR2J3-220ENST00000613744 CDHR2Q9BYE9 1310 aa25.72■■□□□ 1.71
POLR2J3-220ENST00000613744 DNM1Q05193 864 aaKnown RBP25.72■■□□□ 1.71
POLR2J3-220ENST00000613744 CEP135Q66GS9 1140 aa25.72■■□□□ 1.71
POLR2J3-220ENST00000613744 TSPYL1Q9H0U9 437 aa25.72■■□□□ 1.71
POLR2J3-220ENST00000613744 SGSM2O43147 1006 aa25.71■■□□□ 1.71
POLR2J3-220ENST00000613744 TPD52L1Q16890 204 aaPredicted RBP25.71■■□□□ 1.71
POLR2J3-220ENST00000613744 LMBR1LQ6UX01 489 aa25.71■■□□□ 1.71
POLR2J3-220ENST00000613744 DNAJC2Q99543 621 aaKnown RBP25.71■■□□□ 1.71
POLR2J3-220ENST00000613744 DDX19AQ9NUU7 478 aaKnown RBP25.71■■□□□ 1.71
POLR2J3-220ENST00000613744 ST5P78524 1137 aa25.7■■□□□ 1.71
POLR2J3-220ENST00000613744 DRC7Q8IY82 874 aa25.7■■□□□ 1.71
POLR2J3-220ENST00000613744 ERO1AQ96HE7 468 aa25.7■■□□□ 1.71
POLR2J3-220ENST00000613744 PDE8AO60658 829 aa25.7■■□□□ 1.7
POLR2J3-220ENST00000613744 CBX8Q9HC52 389 aa25.7■■□□□ 1.7
POLR2J3-220ENST00000613744 NAP1L2Q9ULW6 460 aaPredicted RBP25.7■■□□□ 1.7
POLR2J3-220ENST00000613744 KRT85P78386 507 aa25.69■■□□□ 1.7
POLR2J3-220ENST00000613744 IRX5P78411 483 aaPredicted RBP25.69■■□□□ 1.7
POLR2J3-220ENST00000613744 KCND1Q9NSA2 647 aa25.69■■□□□ 1.7
POLR2J3-220ENST00000613744 DDX60Q8IY21 1712 aaKnown RBP25.69■■□□□ 1.7
POLR2J3-220ENST00000613744 TSHZ3Q63HK5 1081 aa25.68■■□□□ 1.7
POLR2J3-220ENST00000613744 POLD1P28340 1107 aa25.68■■□□□ 1.7
POLR2J3-220ENST00000613744 GJB2P29033 226 aa25.68■■□□□ 1.7
POLR2J3-220ENST00000613744 KCNJ4P48050 445 aa25.68■■□□□ 1.7
POLR2J3-220ENST00000613744 CTSWP56202 376 aa25.68■■□□□ 1.7
POLR2J3-220ENST00000613744 VPS53Q5VIR6 699 aa25.68■■□□□ 1.7
POLR2J3-220ENST00000613744 TRIM5Q9C035 493 aa25.68■■□□□ 1.7
POLR2J3-220ENST00000613744 LSG1Q9H089 658 aaKnown RBP25.68■■□□□ 1.7
POLR2J3-220ENST00000613744 KIF2AO00139 706 aaPredicted RBP25.67■■□□□ 1.7
POLR2J3-220ENST00000613744 LRMPQ12912 555 aa25.67■■□□□ 1.7
POLR2J3-220ENST00000613744 TM6SF1Q9BZW5 370 aa25.67■■□□□ 1.7
POLR2J3-220ENST00000613744 TULP2O00295 520 aa25.67■■□□□ 1.7
POLR2J3-220ENST00000613744 SLC10A5Q5PT55 438 aa25.67■■□□□ 1.7
POLR2J3-220ENST00000613744 LUZP1Q86V48 1076 aa25.67■■□□□ 1.7
POLR2J3-220ENST00000613744 TTLL11Q8NHH1 800 aa25.67■■□□□ 1.7
POLR2J3-220ENST00000613744 PLA2G12BQ9BX93 195 aa25.67■■□□□ 1.7
POLR2J3-220ENST00000613744 KMT5BQ4FZB7 885 aa25.66■■□□□ 1.7
POLR2J3-220ENST00000613744 SARM1Q6SZW1 724 aa25.66■■□□□ 1.7
POLR2J3-220ENST00000613744 NLRP3Q96P20 1036 aa25.66■■□□□ 1.7
POLR2J3-220ENST00000613744 TNMDQ9H2S6 317 aa25.66■■□□□ 1.7
POLR2J3-220ENST00000613744 TNRC6CQ9HCJ0 1690 aaKnown RBP25.65■■□□□ 1.7
POLR2J3-220ENST00000613744 RAB11FIP3O75154 756 aa25.65■■□□□ 1.7
POLR2J3-220ENST00000613744 PTGER2P43116 358 aa25.65■■□□□ 1.7
POLR2J3-220ENST00000613744 NYAP1Q6ZVC0 841 aa25.65■■□□□ 1.7
POLR2J3-220ENST00000613744 GREM2Q9H772 168 aa25.65■■□□□ 1.7
POLR2J3-220ENST00000613744 PPP1R1BQ9UD71 204 aaPredicted RBP25.65■■□□□ 1.7
POLR2J3-220ENST00000613744 NRXN2Q9P2S2 1712 aa25.65■■□□□ 1.7
POLR2J3-220ENST00000613744 KLHDC4Q8TBB5 520 aa25.65■■□□□ 1.7
POLR2J3-220ENST00000613744 SSH3Q8TE77 659 aa25.65■■□□□ 1.7
POLR2J3-220ENST00000613744 GOLGB1Q14789 3259 aaKnown RBP25.65■■□□□ 1.7
POLR2J3-220ENST00000613744 RABL6Q3YEC7 729 aaPredicted RBP25.64■■□□□ 1.7
POLR2J3-220ENST00000613744 ANO6Q4KMQ2 910 aa25.64■■□□□ 1.7
POLR2J3-220ENST00000613744 KIF1BPQ96EK5 621 aa25.64■■□□□ 1.7
POLR2J3-220ENST00000613744 SGIP1Q9BQI5 828 aa25.64■■□□□ 1.7
POLR2J3-220ENST00000613744 SCAND2PQ9GZW5 306 aaPredicted RBP25.64■■□□□ 1.7
POLR2J3-220ENST00000613744 CACTINQ8WUQ7 758 aaKnown RBP25.64■■□□□ 1.69
POLR2J3-220ENST00000613744 CLSTN2Q9H4D0 955 aa25.64■■□□□ 1.69
POLR2J3-220ENST00000613744 CLIP2Q9UDT6 1046 aa25.64■■□□□ 1.69
POLR2J3-220ENST00000613744 CSF1RP07333 972 aa25.63■■□□□ 1.69
POLR2J3-220ENST00000613744 PDCP20941 246 aa25.63■■□□□ 1.69
POLR2J3-220ENST00000613744 MTX1Q13505 466 aa25.63■■□□□ 1.69
POLR2J3-220ENST00000613744 POLA2Q14181 598 aa25.63■■□□□ 1.69
POLR2J3-220ENST00000613744 TTC6Q86TZ1 520 aa25.63■■□□□ 1.69
POLR2J3-220ENST00000613744 IL25Q9H293 177 aa25.63■■□□□ 1.69
POLR2J3-220ENST00000613744 SPON1Q9HCB6 807 aa25.63■■□□□ 1.69
POLR2J3-220ENST00000613744 SEC31BQ9NQW1 1179 aa25.63■■□□□ 1.69
POLR2J3-220ENST00000613744 MYH3P11055 1940 aa25.62■■□□□ 1.69
POLR2J3-220ENST00000613744 KCNB2Q92953 911 aa25.62■■□□□ 1.69
POLR2J3-220ENST00000613744 SURF6O75683 361 aaKnown RBP25.62■■□□□ 1.69
POLR2J3-220ENST00000613744 HSP90B1P14625 803 aaKnown RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms