RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ATP6V1DQ9Y5K8 247 aa12.61□□□□□ -0.39
FAM3A-221ENST00000612856 SOS1Q07889 1333 aaPredicted RBP12.61□□□□□ -0.39
FAM3A-221ENST00000612856 GOLGA8BA8MQT2 603 aa12.61□□□□□ -0.39
FAM3A-221ENST00000612856 POLR3GO15318 223 aaPredicted RBP12.61□□□□□ -0.39
FAM3A-221ENST00000612856 IQCA1Q86XH1 822 aa12.61□□□□□ -0.39
FAM3A-221ENST00000612856 SEC62Q99442 399 aaKnown RBP12.61□□□□□ -0.39
FAM3A-221ENST00000612856 LDHBP07195 334 aaKnown RBP12.6□□□□□ -0.39
FAM3A-221ENST00000612856 PARP10Q53GL7 1025 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 ARMT1Q9H993 441 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 RAD17O75943 681 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 MBD4O95243 580 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 ME1P48163 572 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 GIMAP6Q6P9H5 292 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.6□□□□□ -0.39
FAM3A-221ENST00000612856 TNNT1P13805 278 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 XBP1P17861 261 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 STK38Q15208 465 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 CAMK4Q16566 473 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 TMEM67Q5HYA8 995 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 SOGA3Q5TF21 947 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 ZNF804AQ7Z570 1209 aa12.6□□□□□ -0.39
FAM3A-221ENST00000612856 EAF2Q96CJ1 260 aaPredicted RBP12.6□□□□□ -0.39
FAM3A-221ENST00000612856 MYO1BO43795 1136 aa12.59□□□□□ -0.39
FAM3A-221ENST00000612856 ADORA1P30542 326 aa12.59□□□□□ -0.39
FAM3A-221ENST00000612856 GIGYF2Q6Y7W6 1299 aaKnown RBP12.59□□□□□ -0.39
FAM3A-221ENST00000612856 IPO4Q8TEX9 1081 aaKnown RBP12.59□□□□□ -0.39
FAM3A-221ENST00000612856 RBM17Q96I25 401 aaKnown RBP12.59□□□□□ -0.39
FAM3A-221ENST00000612856 RBM8AQ9Y5S9 174 aaKnown RBP12.59□□□□□ -0.39
FAM3A-221ENST00000612856 TNNI3KQ59H18 835 aa12.59□□□□□ -0.39
FAM3A-221ENST00000612856 BEND3Q5T5X7 828 aa12.59□□□□□ -0.39
FAM3A-221ENST00000612856 CCAR2Q8N163 923 aaKnown RBP12.59□□□□□ -0.39
FAM3A-221ENST00000612856 CCDC34Q96HJ3 373 aa12.59□□□□□ -0.39
FAM3A-221ENST00000612856 SCAF8Q9UPN6 1271 aaKnown RBP12.59□□□□□ -0.39
FAM3A-221ENST00000612856 FPGT-TNNI3KV9GXZ4 949 aa12.59□□□□□ -0.39
FAM3A-221ENST00000612856 C21orf2O43822 256 aa12.59□□□□□ -0.39
FAM3A-221ENST00000612856 LDHCP07864 332 aa12.59□□□□□ -0.39
FAM3A-221ENST00000612856 SUSD4Q5VX71 490 aa12.59□□□□□ -0.39
FAM3A-221ENST00000612856 MFSD6Q6ZSS7 791 aa12.59□□□□□ -0.39
FAM3A-221ENST00000612856 ARHGAP23Q9P227 1491 aa12.58□□□□□ -0.39
FAM3A-221ENST00000612856 ANKARQ7Z5J8 1434 aa12.58□□□□□ -0.39
FAM3A-221ENST00000612856 JCADQ9P266 1359 aa12.58□□□□□ -0.39
FAM3A-221ENST00000612856 SLFNL1Q499Z3 407 aa12.58□□□□□ -0.4
FAM3A-221ENST00000612856 TLR7Q9NYK1 1049 aaKnown RBP12.58□□□□□ -0.4
FAM3A-221ENST00000612856 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
FAM3A-221ENST00000612856 FNBP4Q8N3X1 1017 aaPredicted RBP12.58□□□□□ -0.4
FAM3A-221ENST00000612856 ARHGEF1Q92888 912 aaKnown RBP12.58□□□□□ -0.4
FAM3A-221ENST00000612856 BRMS1Q9HCU9 246 aa12.58□□□□□ -0.4
FAM3A-221ENST00000612856 TRMT1Q9NXH9 659 aaKnown RBP12.58□□□□□ -0.4
FAM3A-221ENST00000612856 KDRP35968 1356 aa12.58□□□□□ -0.4
FAM3A-221ENST00000612856 MAP3K15Q6ZN16 1313 aa12.58□□□□□ -0.4
FAM3A-221ENST00000612856 IRX3P78415 501 aaPredicted RBP12.58□□□□□ -0.4
FAM3A-221ENST00000612856 MAPKAPK5Q8IW41 473 aa12.58□□□□□ -0.4
FAM3A-221ENST00000612856 SLC12A7Q9Y666 1083 aa12.58□□□□□ -0.4
FAM3A-221ENST00000612856 SSH2Q76I76 1423 aa12.58□□□□□ -0.4
FAM3A-221ENST00000612856 UQCRFS1P1P0C7P4 283 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 ZNF76P36508 570 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 CTSWP56202 376 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 CCDC73Q6ZRK6 1079 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 PCMTD1Q96MG8 357 aaPredicted RBP12.57□□□□□ -0.4
FAM3A-221ENST00000612856 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.57□□□□□ -0.4
FAM3A-221ENST00000612856 PLS1Q14651 629 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 MFSD14BQ5SR56 506 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 NLGN1Q8N2Q7 840 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 CTCFLQ8NI51 663 aaPredicted RBP12.57□□□□□ -0.4
FAM3A-221ENST00000612856 TNS3Q68CZ2 1445 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 hCG_1642624A0A1W2PR95 340 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 NAA30Q147X3 362 aaPredicted RBP12.57□□□□□ -0.4
FAM3A-221ENST00000612856 TMEM132AQ24JP5 1023 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 EPHA10Q5JZY3 1008 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 USP26Q9BXU7 913 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 CRNKL1Q9BZJ0 848 aaKnown RBP12.57□□□□□ -0.4
FAM3A-221ENST00000612856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.4
FAM3A-221ENST00000612856 SLIT1O75093 1534 aa12.57□□□□□ -0.4
FAM3A-221ENST00000612856 GADD45BO75293 160 aaPredicted RBP12.56□□□□□ -0.4
FAM3A-221ENST00000612856 PHKA1P46020 1223 aa12.56□□□□□ -0.4
FAM3A-221ENST00000612856 MAGEB6P1A0A0J9YX57 407 aa12.56□□□□□ -0.4
FAM3A-221ENST00000612856 CLRN2A0PK11 232 aa12.56□□□□□ -0.4
FAM3A-221ENST00000612856 CHRNA5P30532 468 aa12.56□□□□□ -0.4
FAM3A-221ENST00000612856 FILIP1Q7Z7B0 1213 aa12.56□□□□□ -0.4
FAM3A-221ENST00000612856 TEX11Q8IYF3 940 aa12.56□□□□□ -0.4
FAM3A-221ENST00000612856 TSPY3P0CV98 308 aa12.56□□□□□ -0.4
FAM3A-221ENST00000612856 TSPY8P0CW00 308 aa12.56□□□□□ -0.4
FAM3A-221ENST00000612856 ZNF710Q8N1W2 664 aa12.56□□□□□ -0.4
FAM3A-221ENST00000612856 TMEM51Q9NW97 253 aa12.56□□□□□ -0.4
FAM3A-221ENST00000612856 SETD1AO15047 1707 aaKnown RBP12.56□□□□□ -0.4
FAM3A-221ENST00000612856 ANKRD26Q9UPS8 1709 aa12.56□□□□□ -0.4
FAM3A-221ENST00000612856 GOLGA8AA7E2F4 631 aa12.55□□□□□ -0.4
FAM3A-221ENST00000612856 IL6STP40189 918 aaPredicted RBP12.55□□□□□ -0.4
FAM3A-221ENST00000612856 OGFRQ9NZT2 677 aa12.55□□□□□ -0.4
FAM3A-221ENST00000612856 CALCOCO1Q9P1Z2 691 aa12.55□□□□□ -0.4
FAM3A-221ENST00000612856 KLF18A0A0U1RQI7 1052 aa12.55□□□□□ -0.4
FAM3A-221ENST00000612856 NBPF26B4DH59 902 aa12.55□□□□□ -0.4
FAM3A-221ENST00000612856 HLA-DOAP06340 250 aa12.55□□□□□ -0.4
FAM3A-221ENST00000612856 NBPF10Q6P3W6 841 aaKnown RBP12.55□□□□□ -0.4
FAM3A-221ENST00000612856 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
FAM3A-221ENST00000612856 NBPF15Q8N660 670 aa12.55□□□□□ -0.4
FAM3A-221ENST00000612856 SDR42E1Q8WUS8 393 aa12.55□□□□□ -0.4
FAM3A-221ENST00000612856 MYL10Q9BUA6 226 aa12.55□□□□□ -0.4
FAM3A-221ENST00000612856 CABP5Q9NP86 173 aa12.55□□□□□ -0.4
FAM3A-221ENST00000612856 TTF2Q9UNY4 1162 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms