RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 TTC6Q86TZ1 520 aa13.83□□□□□ -0.2
PPP4R3B-204ENST00000612688 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
PPP4R3B-204ENST00000612688 ARHGEF1Q92888 912 aaKnown RBP13.83□□□□□ -0.2
PPP4R3B-204ENST00000612688 DBNLQ9UJU6 430 aaKnown RBP13.83□□□□□ -0.2
PPP4R3B-204ENST00000612688 RBM8AQ9Y5S9 174 aaKnown RBP13.83□□□□□ -0.2
PPP4R3B-204ENST00000612688 RBM6P78332 1123 aaKnown RBP13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 TPD52L1Q16890 204 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 TNNI3KQ59H18 835 aa13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 TBC1D9BQ66K14 1250 aa13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 ZNF34Q8IZ26 560 aa13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 FPGT-TNNI3KV9GXZ4 949 aa13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 SH3TC1Q8TE82 1336 aa13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 RFC4P35249 363 aa13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 ZNF772Q68DY9 489 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 CCDC129Q6ZRS4 1044 aa13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 GPATCH3Q96I76 525 aa13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 TMX1Q9H3N1 280 aa13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 CYP46A1Q9Y6A2 500 aa13.82□□□□□ -0.2
PPP4R3B-204ENST00000612688 JAK2O60674 1132 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 RXRBP28702 533 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 CTSWP56202 376 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 ATG9AQ7Z3C6 839 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 A0A0D9SFI3 127 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 EYA2O00167 538 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 GORABQ5T7V8 394 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 CCDC112Q8NEF3 446 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 ANKRD7Q92527 254 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 FSD1Q9BTV5 496 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 FTOQ9C0B1 505 aaKnown RBP eCLIP13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 SNRKQ9NRH2 765 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 CEP126Q9P2H0 1117 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 CTNNA3Q9UI47 895 aa13.81□□□□□ -0.2
PPP4R3B-204ENST00000612688 GLRX3O76003 335 aaKnown RBP13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 APBA3O96018 575 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 SLFN14P0C7P3 912 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 TRMT1Q9NXH9 659 aaKnown RBP13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 DACT1Q9NYF0 836 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 ZNF652Q9Y2D9 606 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 GOLGA6L4A6NEF3 574 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 ERFEQ4G0M1 354 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 METTL24Q5JXM2 366 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 ZNF589Q86UQ0 364 aaPredicted RBP13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 GTF3C6Q969F1 213 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 CHMP4CQ96CF2 233 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 SEC62Q99442 399 aaKnown RBP13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 TJP1Q07157 1748 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 N4BP2Q86UW6 1770 aaPredicted RBP13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 ANKRD18BA2A2Z9 1011 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 PDE8AO60658 829 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 RPS6KA4O75676 772 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 CREB3L3Q68CJ9 461 aa13.8□□□□□ -0.2
PPP4R3B-204ENST00000612688 TRAPPC3LQ5T215 181 aa13.79□□□□□ -0.2
PPP4R3B-204ENST00000612688 POTEAQ6S8J7 498 aa13.79□□□□□ -0.2
PPP4R3B-204ENST00000612688 A0A1B0GUL7 405 aa13.79□□□□□ -0.2
PPP4R3B-204ENST00000612688 TAF5LO75529 589 aa13.79□□□□□ -0.2
PPP4R3B-204ENST00000612688 ADORA1P30542 326 aa13.79□□□□□ -0.2
PPP4R3B-204ENST00000612688 GUCY1B3Q02153 619 aa13.79□□□□□ -0.2
PPP4R3B-204ENST00000612688 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
PPP4R3B-204ENST00000612688 DDX46Q7L014 1031 aaKnown RBP13.79□□□□□ -0.2
PPP4R3B-204ENST00000612688 TIGD1Q96MW7 591 aa13.79□□□□□ -0.2
PPP4R3B-204ENST00000612688 SETDB2Q96T68 719 aa13.79□□□□□ -0.2
PPP4R3B-204ENST00000612688 TRIM5Q9C035 493 aa13.79□□□□□ -0.2
PPP4R3B-204ENST00000612688 ANO6Q4KMQ2 910 aa13.78□□□□□ -0.2
PPP4R3B-204ENST00000612688 NBPF5PQ86XG9 351 aaPredicted RBP13.78□□□□□ -0.2
PPP4R3B-204ENST00000612688 IL15P40933 162 aaPredicted RBP13.78□□□□□ -0.2
PPP4R3B-204ENST00000612688 ARID5BQ14865 1188 aa13.78□□□□□ -0.2
PPP4R3B-204ENST00000612688 BICD2Q8TD16 824 aa13.78□□□□□ -0.2
PPP4R3B-204ENST00000612688 BTAF1O14981 1849 aa13.78□□□□□ -0.2
PPP4R3B-204ENST00000612688 HSP90B1P14625 803 aaKnown RBP13.77□□□□□ -0.2
PPP4R3B-204ENST00000612688 ZKSCAN1P17029 563 aaPredicted RBP13.77□□□□□ -0.2
PPP4R3B-204ENST00000612688 CHST3Q7LGC8 479 aa13.77□□□□□ -0.2
PPP4R3B-204ENST00000612688 MPHOSPH8Q99549 860 aa13.77□□□□□ -0.2
PPP4R3B-204ENST00000612688 FEZ1Q99689 392 aa13.77□□□□□ -0.2
PPP4R3B-204ENST00000612688 NUP188Q5SRE5 1749 aa13.77□□□□□ -0.2
PPP4R3B-204ENST00000612688 GOLGA6L6A8MZA4 724 aa13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 FKBP4Q02790 459 aaKnown RBP eCLIP13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 DNAJC25Q9H1X3 360 aa13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 NUP98P52948 1817 aa13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 CCDC66A2RUB6 948 aa13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 NTSR2O95665 410 aa13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 CSF1RP07333 972 aa13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 TNNT3P45378 269 aaPredicted RBP13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 TERF2Q15554 542 aa13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 ELF2Q15723 593 aa13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 TXNRD1Q16881 649 aa13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 TAF3Q5VWG9 929 aa13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 RAB11FIP4Q86YS3 637 aa13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 UTRNP46939 3433 aa13.77□□□□□ -0.21
PPP4R3B-204ENST00000612688 CNTNAP4Q9C0A0 1308 aa13.76□□□□□ -0.21
PPP4R3B-204ENST00000612688 SLC27A2O14975 620 aa13.76□□□□□ -0.21
PPP4R3B-204ENST00000612688 POLR3GO15318 223 aaPredicted RBP13.76□□□□□ -0.21
PPP4R3B-204ENST00000612688 NR1I2O75469 434 aa13.76□□□□□ -0.21
PPP4R3B-204ENST00000612688 PI16Q6UXB8 463 aa13.76□□□□□ -0.21
PPP4R3B-204ENST00000612688 PROM2Q8N271 834 aa13.76□□□□□ -0.21
PPP4R3B-204ENST00000612688 NUP62CLQ9H1M0 184 aa13.76□□□□□ -0.21
PPP4R3B-204ENST00000612688 TNMDQ9H2S6 317 aa13.76□□□□□ -0.21
PPP4R3B-204ENST00000612688 NARFQ9UHQ1 456 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms