RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.54□□□□□ -0.88
PTCHD3P1-201ENST00000612350 TRMT112Q9UI30 125 aaKnown RBP9.54□□□□□ -0.88
PTCHD3P1-201ENST00000612350 USP17L3A6NCW0 530 aa9.53□□□□□ -0.88
PTCHD3P1-201ENST00000612350 USP17L4A6NCW7 530 aa9.53□□□□□ -0.88
PTCHD3P1-201ENST00000612350 G3V3G9 751 aa9.53□□□□□ -0.88
PTCHD3P1-201ENST00000612350 HTATSF1O43719 755 aaKnown RBP9.53□□□□□ -0.88
PTCHD3P1-201ENST00000612350 SASH1O94885 1247 aa9.53□□□□□ -0.88
PTCHD3P1-201ENST00000612350 RPS8P62241 208 aaKnown RBP9.53□□□□□ -0.88
PTCHD3P1-201ENST00000612350 USP17L1Q7RTZ2 530 aa9.53□□□□□ -0.88
PTCHD3P1-201ENST00000612350 ZBED3Q96IU2 234 aaPredicted RBP9.53□□□□□ -0.88
PTCHD3P1-201ENST00000612350 MXD3Q9BW11 206 aa9.53□□□□□ -0.88
PTCHD3P1-201ENST00000612350 SSC5DA1L4H1 1573 aa9.53□□□□□ -0.88
PTCHD3P1-201ENST00000612350 EVI5O60447 810 aa9.52□□□□□ -0.89
PTCHD3P1-201ENST00000612350 UFL1O94874 794 aa9.52□□□□□ -0.89
PTCHD3P1-201ENST00000612350 BCAMP50895 628 aa9.52□□□□□ -0.89
PTCHD3P1-201ENST00000612350 PRMT2P55345 433 aa9.52□□□□□ -0.89
PTCHD3P1-201ENST00000612350 EIF4G2P78344 907 aaKnown RBP eCLIP9.52□□□□□ -0.89
PTCHD3P1-201ENST00000612350 PODNQ7Z5L7 613 aa9.52□□□□□ -0.89
PTCHD3P1-201ENST00000612350 APOBEC3FQ8IUX4 373 aaKnown RBP9.52□□□□□ -0.89
PTCHD3P1-201ENST00000612350 ZFYVE28Q9HCC9 887 aa9.52□□□□□ -0.89
PTCHD3P1-201ENST00000612350 RAPGEFL1Q9UHV5 662 aa9.52□□□□□ -0.89
PTCHD3P1-201ENST00000612350 ALPK3Q96L96 1907 aa9.52□□□□□ -0.89
PTCHD3P1-201ENST00000612350 USP2O75604 605 aaPredicted RBP9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 FARP2O94887 1054 aaPredicted RBP9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 GNRH1P01148 92 aa9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 PYGBP11216 843 aa9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 LACTBP83111 547 aaPredicted RBP9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 GSE1Q14687 1217 aa9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 TAF1CQ15572 869 aaPredicted RBP9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 PROSER3Q2NL68 480 aa9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 HSP90AB3PQ58FF7 597 aa9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 DACT2Q5SW24 774 aa9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 OGFOD1Q8N543 542 aa9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 BRI3BPQ8WY22 251 aa9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 DEFB129Q9H1M3 183 aa9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 GGA1Q9UJY5 639 aa9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 RPTORQ8N122 1335 aa9.51□□□□□ -0.89
PTCHD3P1-201ENST00000612350 UNC80Q8N2C7 3258 aa9.5□□□□□ -0.89
PTCHD3P1-201ENST00000612350 PPP1R12BO60237 982 aaPredicted RBP9.5□□□□□ -0.89
PTCHD3P1-201ENST00000612350 CCL5P13501 91 aa9.5□□□□□ -0.89
PTCHD3P1-201ENST00000612350 CTGFP29279 349 aa9.5□□□□□ -0.89
PTCHD3P1-201ENST00000612350 PLA2G5P39877 138 aa9.5□□□□□ -0.89
PTCHD3P1-201ENST00000612350 FAM43AQ8N2R8 423 aa9.5□□□□□ -0.89
PTCHD3P1-201ENST00000612350 U2AF1L4Q8WU68 220 aaKnown RBP9.5□□□□□ -0.89
PTCHD3P1-201ENST00000612350 ZNF428Q96B54 188 aa9.5□□□□□ -0.89
PTCHD3P1-201ENST00000612350 GUCD1Q96NT3 240 aa9.5□□□□□ -0.89
PTCHD3P1-201ENST00000612350 COL1A1P02452 1464 aaPredicted RBP9.49□□□□□ -0.89
PTCHD3P1-201ENST00000612350 TLR2O60603 784 aa9.49□□□□□ -0.89
PTCHD3P1-201ENST00000612350 ANXA1P04083 346 aa9.49□□□□□ -0.89
PTCHD3P1-201ENST00000612350 GRK4P32298 578 aa9.49□□□□□ -0.89
PTCHD3P1-201ENST00000612350 MMP14P50281 582 aa9.49□□□□□ -0.89
PTCHD3P1-201ENST00000612350 ANKRD13AQ8IZ07 590 aa9.49□□□□□ -0.89
PTCHD3P1-201ENST00000612350 PNISRQ8TF01 805 aaKnown RBP9.49□□□□□ -0.89
PTCHD3P1-201ENST00000612350 RNF208Q9H0X6 261 aa9.49□□□□□ -0.89
PTCHD3P1-201ENST00000612350 ANKIB1Q9P2G1 1089 aa9.49□□□□□ -0.89
PTCHD3P1-201ENST00000612350 TTC28Q96AY4 2481 aa9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 PER1O15534 1290 aaPredicted RBP9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 SGPL1O95470 568 aa9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 KIF22Q14807 665 aa9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 NBPF12Q5TAG4 269 aaPredicted RBP9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 FAM109BQ6ICB4 259 aaPredicted RBP9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 COPS6Q7L5N1 327 aa9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 OPTNQ96CV9 577 aa9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 FAM89AQ96GI7 184 aa9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 SEC31BQ9NQW1 1179 aa9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 SRRDQ9UH36 339 aa9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 RIPOR2Q9Y4F9 1068 aa9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 MYO3BQ8WXR4 1341 aa9.48□□□□□ -0.89
PTCHD3P1-201ENST00000612350 CCL15-CCL14A0A0B4J2E2 113 aa9.47□□□□□ -0.89
PTCHD3P1-201ENST00000612350 IREB2P48200 963 aaKnown RBP9.47□□□□□ -0.89
PTCHD3P1-201ENST00000612350 CCL15Q16663 113 aa9.47□□□□□ -0.89
PTCHD3P1-201ENST00000612350 SUPT20HL1Q3ZLR7 823 aa9.47□□□□□ -0.89
PTCHD3P1-201ENST00000612350 STRIP1Q5VSL9 837 aa9.47□□□□□ -0.89
PTCHD3P1-201ENST00000612350 TDHQ8IZJ6 230 aa9.47□□□□□ -0.89
PTCHD3P1-201ENST00000612350 ELP3Q9H9T3 547 aa9.47□□□□□ -0.89
PTCHD3P1-201ENST00000612350 PPP2R3BQ9Y5P8 575 aa9.47□□□□□ -0.89
PTCHD3P1-201ENST00000612350 OTOFQ9HC10 1997 aa9.46□□□□□ -0.89
PTCHD3P1-201ENST00000612350 POTEMA6NI47 508 aa9.46□□□□□ -0.9
PTCHD3P1-201ENST00000612350 HSPA5P11021 654 aaKnown RBP9.46□□□□□ -0.9
PTCHD3P1-201ENST00000612350 ATP2B4P23634 1241 aa9.46□□□□□ -0.9
PTCHD3P1-201ENST00000612350 GTF2A2P52657 109 aa9.46□□□□□ -0.9
PTCHD3P1-201ENST00000612350 CC2D1BQ5T0F9 858 aaKnown RBP9.46□□□□□ -0.9
PTCHD3P1-201ENST00000612350 XAGE3Q8WTP9 111 aa9.46□□□□□ -0.9
PTCHD3P1-201ENST00000612350 FAM122AQ96E09 287 aa9.46□□□□□ -0.9
PTCHD3P1-201ENST00000612350 TRIM47Q96LD4 638 aa9.46□□□□□ -0.9
PTCHD3P1-201ENST00000612350 ISCA1Q9BUE6 129 aa9.46□□□□□ -0.9
PTCHD3P1-201ENST00000612350 UNC93B1Q9H1C4 597 aa9.46□□□□□ -0.9
PTCHD3P1-201ENST00000612350 PLCG2P16885 1265 aa9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 EIF2S2P20042 333 aaKnown RBP9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 OSBPP22059 807 aa9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 MAGEA10P43363 369 aaPredicted RBP9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 PSMC4P43686 418 aa9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 AIMP1Q12904 312 aaKnown RBP9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 C17orf99Q6UX52 265 aa9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 KIAA0825Q8IV33 1275 aa9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 RAET1EQ8TD07 263 aa9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 ZMYND8Q9ULU4 1186 aaPredicted RBP9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 PCDHAC2Q9Y5I4 1007 aa9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 ZNF804BA4D1E1 1349 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms