RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 NF2P35240 595 aa15.31■□□□□ 0.04
CBWD3-208ENST00000612050 GYG1P46976 350 aa15.31■□□□□ 0.04
CBWD3-208ENST00000612050 DLGAP5Q15398 846 aa15.31■□□□□ 0.04
CBWD3-208ENST00000612050 ANGEL2Q5VTE6 544 aaKnown RBP15.31■□□□□ 0.04
CBWD3-208ENST00000612050 TMEM57Q8N5G2 664 aa15.31■□□□□ 0.04
CBWD3-208ENST00000612050 C2orf69Q8N8R5 385 aa15.31■□□□□ 0.04
CBWD3-208ENST00000612050 JMYQ8N9B5 988 aa15.31■□□□□ 0.04
CBWD3-208ENST00000612050 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.31■□□□□ 0.04
CBWD3-208ENST00000612050 TBC1D22AQ8WUA7 517 aa15.31■□□□□ 0.04
CBWD3-208ENST00000612050 LPIN2Q92539 896 aa15.31■□□□□ 0.04
CBWD3-208ENST00000612050 CHMP4BQ9H444 224 aaKnown RBP15.31■□□□□ 0.04
CBWD3-208ENST00000612050 GNL3LQ9NVN8 582 aaKnown RBP15.31■□□□□ 0.04
CBWD3-208ENST00000612050 RBM5P52756 815 aaKnown RBP eCLIP15.3■□□□□ 0.04
CBWD3-208ENST00000612050 APOBEC3FQ8IUX4 373 aaKnown RBP15.3■□□□□ 0.04
CBWD3-208ENST00000612050 AKAP2Q9Y2D5 859 aa15.3■□□□□ 0.04
CBWD3-208ENST00000612050 RASSF10A6NK89 507 aa15.29■□□□□ 0.04
CBWD3-208ENST00000612050 F8W031 263 aaPredicted RBP15.29■□□□□ 0.04
CBWD3-208ENST00000612050 EGFRP00533 1210 aa15.29■□□□□ 0.04
CBWD3-208ENST00000612050 RFX5P48382 616 aaPredicted RBP15.29■□□□□ 0.04
CBWD3-208ENST00000612050 ATP2B3Q16720 1220 aa15.29■□□□□ 0.04
CBWD3-208ENST00000612050 MFSD14BQ5SR56 506 aa15.29■□□□□ 0.04
CBWD3-208ENST00000612050 TDRD7Q8NHU6 1098 aaKnown RBP15.29■□□□□ 0.04
CBWD3-208ENST00000612050 AIDAQ96BJ3 306 aa15.29■□□□□ 0.04
CBWD3-208ENST00000612050 FAM84BQ96KN1 310 aaPredicted RBP15.29■□□□□ 0.04
CBWD3-208ENST00000612050 MXD3Q9BW11 206 aa15.29■□□□□ 0.04
CBWD3-208ENST00000612050 COPRSQ9NQ92 184 aa15.29■□□□□ 0.04
CBWD3-208ENST00000612050 IRS2Q9Y4H2 1338 aa15.29■□□□□ 0.04
CBWD3-208ENST00000612050 MAST3O60307 1309 aa15.28■□□□□ 0.04
CBWD3-208ENST00000612050 FAM205AQ6ZU69 1335 aa15.28■□□□□ 0.04
CBWD3-208ENST00000612050 G3BP1Q13283 466 aaKnown RBP eCLIP15.28■□□□□ 0.04
CBWD3-208ENST00000612050 MTX1Q13505 466 aa15.28■□□□□ 0.04
CBWD3-208ENST00000612050 TLL2Q9Y6L7 1015 aa15.28■□□□□ 0.04
CBWD3-208ENST00000612050 MYH13Q9UKX3 1938 aa15.28■□□□□ 0.04
CBWD3-208ENST00000612050 WNT10BO00744 389 aa15.27■□□□□ 0.04
CBWD3-208ENST00000612050 CHAF1AQ13111 956 aaPredicted RBP15.27■□□□□ 0.04
CBWD3-208ENST00000612050 GRM1Q13255 1194 aa15.27■□□□□ 0.04
CBWD3-208ENST00000612050 OS9Q13438 667 aaPredicted RBP15.27■□□□□ 0.04
CBWD3-208ENST00000612050 VGLL2Q8N8G2 317 aa15.27■□□□□ 0.04
CBWD3-208ENST00000612050 BEGAINQ9BUH8 593 aa15.27■□□□□ 0.04
CBWD3-208ENST00000612050 RCAN3Q9UKA8 241 aa15.27■□□□□ 0.04
CBWD3-208ENST00000612050 POLR2AP24928 1970 aaKnown RBP15.27■□□□□ 0.04
CBWD3-208ENST00000612050 ZNF646O15015 1829 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-208ENST00000612050 ADM5C9JUS6 153 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 CST9Q5W186 159 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 FBXO33Q7Z6M2 555 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 HHIPL1Q96JK4 782 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 GBA2Q9HCG7 927 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-208ENST00000612050 TTF2Q9UNY4 1162 aaKnown RBP15.26■□□□□ 0.03
CBWD3-208ENST00000612050 JAG2Q9Y219 1238 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 ARAP2Q8WZ64 1704 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 WDR33Q9C0J8 1336 aaKnown RBP15.26■□□□□ 0.03
CBWD3-208ENST00000612050 VEGFBP49765 207 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 HUNKP57058 714 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 MAP2K1Q02750 393 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-208ENST00000612050 FMR1Q06787 632 aaKnown RBP eCLIP15.26■□□□□ 0.03
CBWD3-208ENST00000612050 NBPF9Q3BBW0 867 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 GORABQ5T7V8 394 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 ATG9AQ7Z3C6 839 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 SAPCD2Q86UD0 394 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 WDR66Q8TBY9 1149 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 CDCA5Q96FF9 252 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 CAPNS2Q96L46 248 aa15.26■□□□□ 0.03
CBWD3-208ENST00000612050 IQSEC3Q9UPP2 1182 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-208ENST00000612050 PA2G4Q9UQ80 394 aaKnown RBP15.26■□□□□ 0.03
CBWD3-208ENST00000612050 FGFR2P21802 821 aa15.25■□□□□ 0.03
CBWD3-208ENST00000612050 BCAMP50895 628 aa15.25■□□□□ 0.03
CBWD3-208ENST00000612050 FKBP1BP68106 108 aa15.25■□□□□ 0.03
CBWD3-208ENST00000612050 TNFAIP1Q13829 316 aa15.25■□□□□ 0.03
CBWD3-208ENST00000612050 TTLL12Q14166 644 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-208ENST00000612050 CFAP100Q494V2 611 aa15.25■□□□□ 0.03
CBWD3-208ENST00000612050 MTMR14Q8NCE2 650 aa15.25■□□□□ 0.03
CBWD3-208ENST00000612050 SERPINA10Q9UK55 444 aa15.25■□□□□ 0.03
CBWD3-208ENST00000612050 TNNQ9UQP3 1299 aa15.25■□□□□ 0.03
CBWD3-208ENST00000612050 SUGT1Q9Y2Z0 365 aa15.25■□□□□ 0.03
CBWD3-208ENST00000612050 ECM29Q5VYK3 1845 aa15.25■□□□□ 0.03
CBWD3-208ENST00000612050 COL1A1P02452 1464 aaPredicted RBP15.24■□□□□ 0.03
CBWD3-208ENST00000612050 SEMA3EO15041 775 aa15.24■□□□□ 0.03
CBWD3-208ENST00000612050 MVPQ14764 893 aaKnown RBP15.24■□□□□ 0.03
CBWD3-208ENST00000612050 ZGPATQ8N5A5 531 aaKnown RBP15.24■□□□□ 0.03
CBWD3-208ENST00000612050 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
CBWD3-208ENST00000612050 TMOD2Q9NZR1 351 aa15.24■□□□□ 0.03
CBWD3-208ENST00000612050 DENND2AQ9ULE3 1009 aa15.24■□□□□ 0.03
CBWD3-208ENST00000612050 PPP2R3BQ9Y5P8 575 aa15.24■□□□□ 0.03
CBWD3-208ENST00000612050 CEP350Q5VT06 3117 aa15.23■□□□□ 0.03
CBWD3-208ENST00000612050 HSPA1AP0DMV8 641 aaKnown RBP15.23■□□□□ 0.03
CBWD3-208ENST00000612050 HSPA1BP0DMV9 641 aaKnown RBP15.23■□□□□ 0.03
CBWD3-208ENST00000612050 TNNI2P48788 182 aa15.23■□□□□ 0.03
CBWD3-208ENST00000612050 CYP4F22Q6NT55 531 aa15.23■□□□□ 0.03
CBWD3-208ENST00000612050 TEKT1Q969V4 418 aa15.23■□□□□ 0.03
CBWD3-208ENST00000612050 CCDC102AQ96A19 550 aa15.23■□□□□ 0.03
CBWD3-208ENST00000612050 NEUROD6Q96NK8 337 aa15.23■□□□□ 0.03
CBWD3-208ENST00000612050 VEZTQ9HBM0 779 aa15.23■□□□□ 0.03
CBWD3-208ENST00000612050 DDX19BQ9UMR2 479 aa15.23■□□□□ 0.03
CBWD3-208ENST00000612050 ASTN2O75129 1339 aaPredicted RBP15.22■□□□□ 0.03
CBWD3-208ENST00000612050 SPDYE2BA6NHP3 402 aa15.22■□□□□ 0.03
CBWD3-208ENST00000612050 SPDYE6P0CI01 402 aa15.22■□□□□ 0.03
CBWD3-208ENST00000612050 MAP2K2P36507 400 aa15.22■□□□□ 0.03
CBWD3-208ENST00000612050 HDLBPQ00341 1268 aaKnown RBP15.22■□□□□ 0.03
CBWD3-208ENST00000612050 ARMC9Q7Z3E5 817 aa15.22■□□□□ 0.03
CBWD3-208ENST00000612050 A0A1B0GUL7 405 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms