RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TRIM44Q96DX7 344 aaPredicted RBP16.08■□□□□ 0.17
NEK3-205ENST00000610828 COL5A3P25940 1745 aaPredicted RBP16.08■□□□□ 0.17
NEK3-205ENST00000610828 ZNF213O14771 459 aa16.08■□□□□ 0.16
NEK3-205ENST00000610828 CCDC173Q0VFZ6 552 aa16.08■□□□□ 0.16
NEK3-205ENST00000610828 MYO5AQ9Y4I1 1855 aaKnown RBP16.08■□□□□ 0.16
NEK3-205ENST00000610828 ZNF532Q9HCE3 1301 aa16.08■□□□□ 0.16
NEK3-205ENST00000610828 H3BQV1 296 aa16.07■□□□□ 0.16
NEK3-205ENST00000610828 UBE3CQ15386 1083 aa16.07■□□□□ 0.16
NEK3-205ENST00000610828 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
NEK3-205ENST00000610828 SPATA5Q8NB90 893 aa16.07■□□□□ 0.16
NEK3-205ENST00000610828 LLPHQ9BRT6 129 aaKnown RBP16.07■□□□□ 0.16
NEK3-205ENST00000610828 WWC3Q9ULE0 1092 aa16.07■□□□□ 0.16
NEK3-205ENST00000610828 PDE6AP16499 860 aa16.07■□□□□ 0.16
NEK3-205ENST00000610828 CCDC183Q5T5S1 534 aa16.07■□□□□ 0.16
NEK3-205ENST00000610828 CLEC4GQ6UXB4 293 aa16.07■□□□□ 0.16
NEK3-205ENST00000610828 PTF1AQ7RTS3 328 aa16.07■□□□□ 0.16
NEK3-205ENST00000610828 NSUN7Q8NE18 718 aaKnown RBP16.07■□□□□ 0.16
NEK3-205ENST00000610828 SMARCC2Q8TAQ2 1214 aa16.07■□□□□ 0.16
NEK3-205ENST00000610828 NCOA5Q9HCD5 579 aaKnown RBP16.07■□□□□ 0.16
NEK3-205ENST00000610828 APPP05067 770 aa16.06■□□□□ 0.16
NEK3-205ENST00000610828 RASGRF1Q13972 1273 aa16.06■□□□□ 0.16
NEK3-205ENST00000610828 ARAP2Q8WZ64 1704 aa16.06■□□□□ 0.16
NEK3-205ENST00000610828 TSPY26PQ9H489 355 aa16.06■□□□□ 0.16
NEK3-205ENST00000610828 RTL9Q8NET4 1388 aa16.06■□□□□ 0.16
NEK3-205ENST00000610828 ATRNO75882 1429 aa16.06■□□□□ 0.16
NEK3-205ENST00000610828 PDIA3P30101 505 aaKnown RBP16.06■□□□□ 0.16
NEK3-205ENST00000610828 RALYLQ86SE5 291 aaKnown RBP16.06■□□□□ 0.16
NEK3-205ENST00000610828 RNF214Q8ND24 703 aa16.06■□□□□ 0.16
NEK3-205ENST00000610828 NCOA7Q8NI08 942 aa16.06■□□□□ 0.16
NEK3-205ENST00000610828 ZNF274Q96GC6 653 aaPredicted RBP16.06■□□□□ 0.16
NEK3-205ENST00000610828 PTPDC1A2A3K4 754 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 CTDNEP1O95476 244 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 MCM5P33992 734 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 CHRNDQ07001 517 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 ERFEQ4G0M1 354 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 BICDL1Q6ZP65 573 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 SMIM5Q71RC9 77 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 TTC6Q86TZ1 520 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 AIDAQ96BJ3 306 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 RRAGDQ9NQL2 400 aaPredicted RBP16.05■□□□□ 0.16
NEK3-205ENST00000610828 GPHNQ9NQX3 736 aaPredicted RBP16.05■□□□□ 0.16
NEK3-205ENST00000610828 BCORQ6W2J9 1755 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 PRC1O43663 620 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 PPFIA3O75145 1194 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 BCAMP50895 628 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 HMGN5P82970 282 aaKnown RBP16.05■□□□□ 0.16
NEK3-205ENST00000610828 PPP1R9BQ96SB3 815 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 TFIP11Q9UBB9 837 aaKnown RBP16.05■□□□□ 0.16
NEK3-205ENST00000610828 LAMB2P55268 1798 aa16.05■□□□□ 0.16
NEK3-205ENST00000610828 TCRBV5S4A2TA0A5A2 114 aa16.04■□□□□ 0.16
NEK3-205ENST00000610828 MB21D2Q8IYB1 491 aaPredicted RBP16.04■□□□□ 0.16
NEK3-205ENST00000610828 FBXL16Q8N461 479 aa16.04■□□□□ 0.16
NEK3-205ENST00000610828 CDC5LQ99459 802 aaKnown RBP16.04■□□□□ 0.16
NEK3-205ENST00000610828 FOSBP53539 338 aa16.04■□□□□ 0.16
NEK3-205ENST00000610828 MAP3K12Q12852 859 aa16.04■□□□□ 0.16
NEK3-205ENST00000610828 FNBP4Q8N3X1 1017 aaPredicted RBP16.04■□□□□ 0.16
NEK3-205ENST00000610828 MAGEB6Q8N7X4 407 aa16.04■□□□□ 0.16
NEK3-205ENST00000610828 SCAND2PQ9GZW5 306 aaPredicted RBP16.04■□□□□ 0.16
NEK3-205ENST00000610828 USP21Q9UK80 565 aa16.04■□□□□ 0.16
NEK3-205ENST00000610828 KIF3AQ9Y496 699 aa16.04■□□□□ 0.16
NEK3-205ENST00000610828 GTF2E1P29083 439 aaPredicted RBP16.03■□□□□ 0.16
NEK3-205ENST00000610828 TRDNQ13061 729 aa16.03■□□□□ 0.16
NEK3-205ENST00000610828 FAM182BQ5T319 152 aa16.03■□□□□ 0.16
NEK3-205ENST00000610828 SPATA32Q96LK8 384 aa16.03■□□□□ 0.16
NEK3-205ENST00000610828 ZNF831Q5JPB2 1677 aa16.03■□□□□ 0.16
NEK3-205ENST00000610828 LETM1O95202 739 aaPredicted RBP16.02■□□□□ 0.16
NEK3-205ENST00000610828 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.16
NEK3-205ENST00000610828 ELP1O95163 1332 aa16.02■□□□□ 0.16
NEK3-205ENST00000610828 CNTNAP4Q9C0A0 1308 aa16.02■□□□□ 0.16
NEK3-205ENST00000610828 ANTXR2P58335 489 aa16.02■□□□□ 0.15
NEK3-205ENST00000610828 RESTQ13127 1097 aa16.02■□□□□ 0.15
NEK3-205ENST00000610828 STRBPQ96SI9 672 aaKnown RBP16.02■□□□□ 0.15
NEK3-205ENST00000610828 ZSCAN16Q9H4T2 348 aaPredicted RBP16.02■□□□□ 0.15
NEK3-205ENST00000610828 SALL1Q9NSC2 1324 aa16.01■□□□□ 0.15
NEK3-205ENST00000610828 KLF18A0A0U1RQI7 1052 aa16.01■□□□□ 0.15
NEK3-205ENST00000610828 EVCP57679 992 aa16.01■□□□□ 0.15
NEK3-205ENST00000610828 TBC1D9BQ66K14 1250 aa16.01■□□□□ 0.15
NEK3-205ENST00000610828 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
NEK3-205ENST00000610828 CHMP4CQ96CF2 233 aa16.01■□□□□ 0.15
NEK3-205ENST00000610828 NBPF3Q9H094 633 aa16.01■□□□□ 0.15
NEK3-205ENST00000610828 COL4A1P02462 1669 aa16.01■□□□□ 0.15
NEK3-205ENST00000610828 GOLGA6L4A6NEF3 574 aa16.01■□□□□ 0.15
NEK3-205ENST00000610828 TBC1D10CQ8IV04 446 aa16.01■□□□□ 0.15
NEK3-205ENST00000610828 DENND2AQ9ULE3 1009 aa16.01■□□□□ 0.15
NEK3-205ENST00000610828 GOLGA8BA8MQT2 603 aa16■□□□□ 0.15
NEK3-205ENST00000610828 MBD4O95243 580 aa16■□□□□ 0.15
NEK3-205ENST00000610828 NAA16Q6N069 864 aaPredicted RBP16■□□□□ 0.15
NEK3-205ENST00000610828 LEO1Q8WVC0 666 aaPredicted RBP16■□□□□ 0.15
NEK3-205ENST00000610828 IQSEC3Q9UPP2 1182 aaPredicted RBP16■□□□□ 0.15
NEK3-205ENST00000610828 GNPATO15228 680 aa16■□□□□ 0.15
NEK3-205ENST00000610828 SF3B3Q15393 1217 aaKnown RBP16■□□□□ 0.15
NEK3-205ENST00000610828 GIMAP6Q6P9H5 292 aa16■□□□□ 0.15
NEK3-205ENST00000610828 ARMT1Q9H993 441 aa16■□□□□ 0.15
NEK3-205ENST00000610828 BCL2L12Q9HB09 334 aa16■□□□□ 0.15
NEK3-205ENST00000610828 CARMIL3Q8ND23 1372 aa15.99■□□□□ 0.15
NEK3-205ENST00000610828 RAB11FIP4Q86YS3 637 aa15.99■□□□□ 0.15
NEK3-205ENST00000610828 LRP2BPQ9P2M1 347 aa15.99■□□□□ 0.15
NEK3-205ENST00000610828 SRP68Q9UHB9 627 aaKnown RBP15.99■□□□□ 0.15
NEK3-205ENST00000610828 DOCK2Q92608 1830 aa15.99■□□□□ 0.15
NEK3-205ENST00000610828 ESPNB1AK53 854 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms