RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 CLMNQ96JQ2 1002 aa22.15■■□□□ 1.14
CHMP4A-211ENST00000609024 CLRN2A0PK11 232 aa22.14■■□□□ 1.13
CHMP4A-211ENST00000609024 IGF2BP3O00425 579 aaKnown RBP eCLIP22.14■■□□□ 1.13
CHMP4A-211ENST00000609024 GCKRQ14397 625 aa22.14■■□□□ 1.13
CHMP4A-211ENST00000609024 ARHGEF6Q15052 776 aa22.14■■□□□ 1.13
CHMP4A-211ENST00000609024 HABP4Q5JVS0 413 aaKnown RBP22.14■■□□□ 1.13
CHMP4A-211ENST00000609024 MTMR14Q8NCE2 650 aa22.14■■□□□ 1.13
CHMP4A-211ENST00000609024 CD99L2Q8TCZ2 262 aa22.14■■□□□ 1.13
CHMP4A-211ENST00000609024 PLA2G12BQ9BX93 195 aa22.14■■□□□ 1.13
CHMP4A-211ENST00000609024 EFCC1Q9HA90 598 aa22.14■■□□□ 1.13
CHMP4A-211ENST00000609024 PTPN22Q9Y2R2 807 aa22.14■■□□□ 1.13
CHMP4A-211ENST00000609024 CHMP3Q9Y3E7 222 aa22.14■■□□□ 1.13
CHMP4A-211ENST00000609024 ZNF646O15015 1829 aaPredicted RBP22.14■■□□□ 1.13
CHMP4A-211ENST00000609024 POTEFA5A3E0 1075 aa22.13■■□□□ 1.13
CHMP4A-211ENST00000609024 ANKRD13AQ8IZ07 590 aa22.13■■□□□ 1.13
CHMP4A-211ENST00000609024 TMEM106CQ9BVX2 250 aa22.13■■□□□ 1.13
CHMP4A-211ENST00000609024 SP3Q02447 781 aa22.12■■□□□ 1.13
CHMP4A-211ENST00000609024 IFIT5Q13325 482 aaKnown RBP22.12■■□□□ 1.13
CHMP4A-211ENST00000609024 FKBP5Q13451 457 aaPredicted RBP22.12■■□□□ 1.13
CHMP4A-211ENST00000609024 TWISTNBQ3B726 338 aaPredicted RBP22.12■■□□□ 1.13
CHMP4A-211ENST00000609024 TSR2Q969E8 191 aaKnown RBP22.12■■□□□ 1.13
CHMP4A-211ENST00000609024 SPDYE2BA6NHP3 402 aa22.11■■□□□ 1.13
CHMP4A-211ENST00000609024 TAF5LO75529 589 aa22.11■■□□□ 1.13
CHMP4A-211ENST00000609024 SPDYE6P0CI01 402 aa22.11■■□□□ 1.13
CHMP4A-211ENST00000609024 CRHR2Q13324 411 aa22.11■■□□□ 1.13
CHMP4A-211ENST00000609024 TNFAIP1Q13829 316 aa22.11■■□□□ 1.13
CHMP4A-211ENST00000609024 CSF1RP07333 972 aa22.1■■□□□ 1.13
CHMP4A-211ENST00000609024 TAF7LQ5H9L4 462 aa22.1■■□□□ 1.13
CHMP4A-211ENST00000609024 NBPF12Q5TAG4 269 aaPredicted RBP22.1■■□□□ 1.13
CHMP4A-211ENST00000609024 G2E3Q7L622 706 aa22.1■■□□□ 1.13
CHMP4A-211ENST00000609024 CERS5Q8N5B7 392 aa22.1■■□□□ 1.13
CHMP4A-211ENST00000609024 HELBQ8NG08 1087 aaPredicted RBP22.1■■□□□ 1.13
CHMP4A-211ENST00000609024 PRMT6Q96LA8 375 aaPredicted RBP22.1■■□□□ 1.13
CHMP4A-211ENST00000609024 WDHD1O75717 1129 aaPredicted RBP22.09■■□□□ 1.13
CHMP4A-211ENST00000609024 FKBP1AP62942 108 aaKnown RBP22.09■■□□□ 1.13
CHMP4A-211ENST00000609024 RASA3Q14644 834 aa22.09■■□□□ 1.13
CHMP4A-211ENST00000609024 NBPF11Q86T75 865 aa22.09■■□□□ 1.13
CHMP4A-211ENST00000609024 LINS1Q8NG48 757 aa22.09■■□□□ 1.13
CHMP4A-211ENST00000609024 DNAAF4Q8WXU2 420 aa22.09■■□□□ 1.13
CHMP4A-211ENST00000609024 ECM29Q5VYK3 1845 aa22.08■■□□□ 1.13
CHMP4A-211ENST00000609024 USP2O75604 605 aaPredicted RBP22.08■■□□□ 1.13
CHMP4A-211ENST00000609024 FLIIQ13045 1269 aa22.08■■□□□ 1.13
CHMP4A-211ENST00000609024 C15orf52Q6ZUT6 534 aaKnown RBP22.08■■□□□ 1.13
CHMP4A-211ENST00000609024 PRKRIP1Q9H875 184 aaPredicted RBP22.08■■□□□ 1.13
CHMP4A-211ENST00000609024 ELP3Q9H9T3 547 aa22.08■■□□□ 1.13
CHMP4A-211ENST00000609024 JAG2Q9Y219 1238 aa22.08■■□□□ 1.13
CHMP4A-211ENST00000609024 PCDHAC2Q9Y5I4 1007 aa22.08■■□□□ 1.13
CHMP4A-211ENST00000609024 SNAP23O00161 211 aa22.07■■□□□ 1.12
CHMP4A-211ENST00000609024 PLIN1O60240 522 aa22.07■■□□□ 1.12
CHMP4A-211ENST00000609024 IL1R1P14778 569 aa22.07■■□□□ 1.12
CHMP4A-211ENST00000609024 EN2P19622 333 aaPredicted RBP22.07■■□□□ 1.12
CHMP4A-211ENST00000609024 ARMC5Q96C12 935 aa22.07■■□□□ 1.12
CHMP4A-211ENST00000609024 OPTNQ96CV9 577 aa22.07■■□□□ 1.12
CHMP4A-211ENST00000609024 SSC5DA1L4H1 1573 aa22.07■■□□□ 1.12
CHMP4A-211ENST00000609024 CCDC57Q2TAC2 916 aa22.06■■□□□ 1.12
CHMP4A-211ENST00000609024 ZFYVE28Q9HCC9 887 aa22.06■■□□□ 1.12
CHMP4A-211ENST00000609024 CNNM1Q9NRU3 951 aa22.06■■□□□ 1.12
CHMP4A-211ENST00000609024 TNNI2P48788 182 aa22.05■■□□□ 1.12
CHMP4A-211ENST00000609024 SLC4A8Q2Y0W8 1093 aa22.05■■□□□ 1.12
CHMP4A-211ENST00000609024 SLC9C1Q4G0N8 1177 aa22.05■■□□□ 1.12
CHMP4A-211ENST00000609024 TESPA1A2RU30 521 aaPredicted RBP22.04■■□□□ 1.12
CHMP4A-211ENST00000609024 GJA5P36382 358 aa22.04■■□□□ 1.12
CHMP4A-211ENST00000609024 CASP7P55210 303 aa22.04■■□□□ 1.12
CHMP4A-211ENST00000609024 TAF1CQ15572 869 aaPredicted RBP22.04■■□□□ 1.12
CHMP4A-211ENST00000609024 LDHAL6AQ6ZMR3 332 aa22.04■■□□□ 1.12
CHMP4A-211ENST00000609024 CSADQ9Y600 493 aa22.04■■□□□ 1.12
CHMP4A-211ENST00000609024 RBBP6Q7Z6E9 1792 aaKnown RBP22.03■■□□□ 1.12
CHMP4A-211ENST00000609024 GTF2A2P52657 109 aa22.03■■□□□ 1.12
CHMP4A-211ENST00000609024 PTPN18Q99952 460 aa22.03■■□□□ 1.12
CHMP4A-211ENST00000609024 TTF2Q9UNY4 1162 aaKnown RBP22.03■■□□□ 1.12
CHMP4A-211ENST00000609024 CCL15-CCL14A0A0B4J2E2 113 aa22.02■■□□□ 1.12
CHMP4A-211ENST00000609024 KIF22Q14807 665 aa22.02■■□□□ 1.12
CHMP4A-211ENST00000609024 CCL15Q16663 113 aa22.02■■□□□ 1.12
CHMP4A-211ENST00000609024 MFSD14BQ5SR56 506 aa22.02■■□□□ 1.12
CHMP4A-211ENST00000609024 ZNF70Q9UC06 446 aaPredicted RBP22.02■■□□□ 1.12
CHMP4A-211ENST00000609024 SPDYE2Q495Y8 402 aa22.01■■□□□ 1.11
CHMP4A-211ENST00000609024 TDRD3Q9H7E2 651 aaKnown RBP22.01■■□□□ 1.11
CHMP4A-211ENST00000609024 SERPINA10Q9UK55 444 aa22.01■■□□□ 1.11
CHMP4A-211ENST00000609024 LAMB1P07942 1786 aa22.01■■□□□ 1.11
CHMP4A-211ENST00000609024 IRS2Q9Y4H2 1338 aa22.01■■□□□ 1.11
CHMP4A-211ENST00000609024 MAP3K9P80192 1104 aa22■■□□□ 1.11
CHMP4A-211ENST00000609024 LMBR1LQ6UX01 489 aa22■■□□□ 1.11
CHMP4A-211ENST00000609024 ZNF333Q96JL9 665 aa22■■□□□ 1.11
CHMP4A-211ENST00000609024 KIAA0100Q14667 2235 aaKnown RBP21.99■■□□□ 1.11
CHMP4A-211ENST00000609024 TCP10L2B9ZVM9 353 aa21.99■■□□□ 1.11
CHMP4A-211ENST00000609024 MYCP01106 439 aaPredicted RBP21.99■■□□□ 1.11
CHMP4A-211ENST00000609024 HIBADHP31937 336 aaKnown RBP21.99■■□□□ 1.11
CHMP4A-211ENST00000609024 FOXO4P98177 505 aa21.99■■□□□ 1.11
CHMP4A-211ENST00000609024 CCDC27Q2M243 656 aa21.99■■□□□ 1.11
CHMP4A-211ENST00000609024 WWC1Q8IX03 1113 aa21.99■■□□□ 1.11
CHMP4A-211ENST00000609024 OTUD5Q96G74 571 aa21.99■■□□□ 1.11
CHMP4A-211ENST00000609024 PTCH2Q9Y6C5 1203 aa21.99■■□□□ 1.11
CHMP4A-211ENST00000609024 FAM205AQ6ZU69 1335 aa21.99■■□□□ 1.11
CHMP4A-211ENST00000609024 VPS37DQ86XT2 251 aa21.98■■□□□ 1.11
CHMP4A-211ENST00000609024 DZIP1LQ8IYY4 767 aaKnown RBP21.98■■□□□ 1.11
CHMP4A-211ENST00000609024 ZNF594Q96JF6 807 aaPredicted RBP21.98■■□□□ 1.11
CHMP4A-211ENST00000609024 FRAT2O75474 233 aaPredicted RBP21.97■■□□□ 1.11
CHMP4A-211ENST00000609024 VGLL4Q14135 290 aa21.97■■□□□ 1.11
CHMP4A-211ENST00000609024 BRI3BPQ8WY22 251 aa21.97■■□□□ 1.11
CHMP4A-211ENST00000609024 MS4A4AQ96JQ5 239 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms