RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 MROH5Q6ZUA9 1318 aa14.41□□□□□ -0.1
LINC00539-204ENST00000608957 WNT10BO00744 389 aa14.41□□□□□ -0.1
LINC00539-204ENST00000608957 FOXN1O15353 648 aa14.41□□□□□ -0.1
LINC00539-204ENST00000608957 SASH1O94885 1247 aa14.41□□□□□ -0.1
LINC00539-204ENST00000608957 METTL24Q5JXM2 366 aa14.41□□□□□ -0.1
LINC00539-204ENST00000608957 COL13A1Q5TAT6 717 aaPredicted RBP14.41□□□□□ -0.1
LINC00539-204ENST00000608957 C20orf194Q5TEA3 1177 aa14.41□□□□□ -0.1
LINC00539-204ENST00000608957 ATG9AQ7Z3C6 839 aa14.41□□□□□ -0.1
LINC00539-204ENST00000608957 TDRD7Q8NHU6 1098 aaKnown RBP14.41□□□□□ -0.1
LINC00539-204ENST00000608957 CAPNS2Q96L46 248 aa14.41□□□□□ -0.1
LINC00539-204ENST00000608957 AOX1Q06278 1338 aa14.41□□□□□ -0.1
LINC00539-204ENST00000608957 PITPNM2Q9BZ72 1349 aa14.41□□□□□ -0.1
LINC00539-204ENST00000608957 PAPPA2Q9BXP8 1791 aa14.4□□□□□ -0.1
LINC00539-204ENST00000608957 AOC2O75106 756 aa14.4□□□□□ -0.1
LINC00539-204ENST00000608957 FGFR2P21802 821 aa14.4□□□□□ -0.1
LINC00539-204ENST00000608957 PDE3AQ14432 1141 aa14.4□□□□□ -0.1
LINC00539-204ENST00000608957 ZKSCAN2Q63HK3 967 aa14.4□□□□□ -0.1
LINC00539-204ENST00000608957 FBXO33Q7Z6M2 555 aa14.4□□□□□ -0.1
LINC00539-204ENST00000608957 CDCA5Q96FF9 252 aa14.4□□□□□ -0.1
LINC00539-204ENST00000608957 CRBNQ96SW2 442 aa14.4□□□□□ -0.1
LINC00539-204ENST00000608957 WBP1LQ9NX94 342 aa14.4□□□□□ -0.1
LINC00539-204ENST00000608957 FAM205AQ6ZU69 1335 aa14.4□□□□□ -0.1
LINC00539-204ENST00000608957 EYA2O00167 538 aa14.39□□□□□ -0.11
LINC00539-204ENST00000608957 PDE8BO95263 885 aa14.39□□□□□ -0.11
LINC00539-204ENST00000608957 HIBADHP31937 336 aaKnown RBP14.39□□□□□ -0.11
LINC00539-204ENST00000608957 FKBP1AP62942 108 aaKnown RBP14.39□□□□□ -0.11
LINC00539-204ENST00000608957 PRAMEF18Q5VWM3 479 aa14.39□□□□□ -0.11
LINC00539-204ENST00000608957 ATF7IPQ6VMQ6 1270 aa14.39□□□□□ -0.11
LINC00539-204ENST00000608957 PAXIP1Q6ZW49 1069 aaPredicted RBP14.39□□□□□ -0.11
LINC00539-204ENST00000608957 SULF1Q8IWU6 871 aa14.39□□□□□ -0.11
LINC00539-204ENST00000608957 GBA2Q9HCG7 927 aaPredicted RBP14.39□□□□□ -0.11
LINC00539-204ENST00000608957 PA2G4Q9UQ80 394 aaKnown RBP14.39□□□□□ -0.11
LINC00539-204ENST00000608957 F8W031 263 aaPredicted RBP14.38□□□□□ -0.11
LINC00539-204ENST00000608957 IPO8O15397 1037 aaKnown RBP14.38□□□□□ -0.11
LINC00539-204ENST00000608957 MS4A1P11836 297 aa14.38□□□□□ -0.11
LINC00539-204ENST00000608957 GRM1Q13255 1194 aa14.38□□□□□ -0.11
LINC00539-204ENST00000608957 GRIK5Q16478 980 aa14.38□□□□□ -0.11
LINC00539-204ENST00000608957 OGFOD1Q8N543 542 aa14.38□□□□□ -0.11
LINC00539-204ENST00000608957 EXOC6Q8TAG9 804 aa14.38□□□□□ -0.11
LINC00539-204ENST00000608957 CLUAP1Q96AJ1 413 aa14.38□□□□□ -0.11
LINC00539-204ENST00000608957 HHIPL1Q96JK4 782 aa14.38□□□□□ -0.11
LINC00539-204ENST00000608957 ZIC5Q96T25 663 aa14.38□□□□□ -0.11
LINC00539-204ENST00000608957 IQSEC3Q9UPP2 1182 aaPredicted RBP14.38□□□□□ -0.11
LINC00539-204ENST00000608957 COL1A1P02452 1464 aaPredicted RBP14.38□□□□□ -0.11
LINC00539-204ENST00000608957 AKAP11Q9UKA4 1901 aa14.37□□□□□ -0.11
LINC00539-204ENST00000608957 HUNKP57058 714 aa14.37□□□□□ -0.11
LINC00539-204ENST00000608957 TMEM57Q8N5G2 664 aa14.37□□□□□ -0.11
LINC00539-204ENST00000608957 MTMR14Q8NCE2 650 aa14.37□□□□□ -0.11
LINC00539-204ENST00000608957 SIL1Q9H173 461 aa14.37□□□□□ -0.11
LINC00539-204ENST00000608957 PPP4R2Q9NY27 417 aa14.37□□□□□ -0.11
LINC00539-204ENST00000608957 HDAC9Q9UKV0 1011 aa14.37□□□□□ -0.11
LINC00539-204ENST00000608957 FAM155AB1AL88 458 aaPredicted RBP14.36□□□□□ -0.11
LINC00539-204ENST00000608957 ECE1P42892 770 aa14.36□□□□□ -0.11
LINC00539-204ENST00000608957 MMP14P50281 582 aa14.36□□□□□ -0.11
LINC00539-204ENST00000608957 BCAMP50895 628 aa14.36□□□□□ -0.11
LINC00539-204ENST00000608957 CFAP100Q494V2 611 aa14.36□□□□□ -0.11
LINC00539-204ENST00000608957 MOB2Q70IA6 237 aa14.36□□□□□ -0.11
LINC00539-204ENST00000608957 FTSJ3Q8IY81 847 aaKnown RBP14.36□□□□□ -0.11
LINC00539-204ENST00000608957 PANK1Q8TE04 598 aa14.36□□□□□ -0.11
LINC00539-204ENST00000608957 OTOFQ9HC10 1997 aa14.35□□□□□ -0.11
LINC00539-204ENST00000608957 CASP8AP2Q9UKL3 1982 aa14.35□□□□□ -0.11
LINC00539-204ENST00000608957 CIAO1O76071 339 aa14.35□□□□□ -0.11
LINC00539-204ENST00000608957 RLBP1P12271 317 aa14.35□□□□□ -0.11
LINC00539-204ENST00000608957 PUM3Q15397 648 aaKnown RBP14.35□□□□□ -0.11
LINC00539-204ENST00000608957 MFSD14BQ5SR56 506 aa14.35□□□□□ -0.11
LINC00539-204ENST00000608957 DZIP1LQ8IYY4 767 aaKnown RBP14.35□□□□□ -0.11
LINC00539-204ENST00000608957 C2orf69Q8N8R5 385 aa14.35□□□□□ -0.11
LINC00539-204ENST00000608957 PRMT6Q96LA8 375 aaPredicted RBP14.35□□□□□ -0.11
LINC00539-204ENST00000608957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.35□□□□□ -0.11
LINC00539-204ENST00000608957 SSC5DA1L4H1 1573 aa14.34□□□□□ -0.11
LINC00539-204ENST00000608957 SPDYE2BA6NHP3 402 aa14.34□□□□□ -0.11
LINC00539-204ENST00000608957 GNAI3P08754 354 aa14.34□□□□□ -0.11
LINC00539-204ENST00000608957 SPDYE6P0CI01 402 aa14.34□□□□□ -0.11
LINC00539-204ENST00000608957 HSPA8P11142 646 aaKnown RBP14.34□□□□□ -0.11
LINC00539-204ENST00000608957 CHAF1AQ13111 956 aaPredicted RBP14.34□□□□□ -0.11
LINC00539-204ENST00000608957 MTX1Q13505 466 aa14.34□□□□□ -0.11
LINC00539-204ENST00000608957 DLGAP5Q15398 846 aa14.34□□□□□ -0.11
LINC00539-204ENST00000608957 RGMBQ6NW40 437 aa14.34□□□□□ -0.11
LINC00539-204ENST00000608957 COPRSQ9NQ92 184 aa14.34□□□□□ -0.11
LINC00539-204ENST00000608957 MYH2Q9UKX2 1941 aa14.33□□□□□ -0.11
LINC00539-204ENST00000608957 LAMB1P07942 1786 aa14.33□□□□□ -0.12
LINC00539-204ENST00000608957 CLRN2A0PK11 232 aa14.33□□□□□ -0.12
LINC00539-204ENST00000608957 MAP2K2P36507 400 aa14.33□□□□□ -0.12
LINC00539-204ENST00000608957 MAP2K1Q02750 393 aaPredicted RBP14.33□□□□□ -0.12
LINC00539-204ENST00000608957 IFFO2Q5TF58 517 aa14.33□□□□□ -0.12
LINC00539-204ENST00000608957 APOBEC3FQ8IUX4 373 aaKnown RBP14.33□□□□□ -0.12
LINC00539-204ENST00000608957 LPIN2Q92539 896 aa14.33□□□□□ -0.12
LINC00539-204ENST00000608957 FBXO3Q9UK99 471 aa14.33□□□□□ -0.12
LINC00539-204ENST00000608957 COG6Q9Y2V7 657 aa14.33□□□□□ -0.12
LINC00539-204ENST00000608957 PNMA6EA0A0J9YXQ4 647 aa14.32□□□□□ -0.12
LINC00539-204ENST00000608957 SLC10A3P09131 477 aa14.32□□□□□ -0.12
LINC00539-204ENST00000608957 IFIT1P09914 478 aaKnown RBP14.32□□□□□ -0.12
LINC00539-204ENST00000608957 SLC5A1P13866 664 aa14.32□□□□□ -0.12
LINC00539-204ENST00000608957 LBX1P52954 281 aa14.32□□□□□ -0.12
LINC00539-204ENST00000608957 ATP2B3Q16720 1220 aa14.32□□□□□ -0.12
LINC00539-204ENST00000608957 CAVIN4Q5BKX8 364 aa14.32□□□□□ -0.12
LINC00539-204ENST00000608957 VPS37DQ86XT2 251 aa14.32□□□□□ -0.12
LINC00539-204ENST00000608957 TTF2Q9UNY4 1162 aaKnown RBP14.32□□□□□ -0.12
LINC00539-204ENST00000608957 FZD1Q9UP38 647 aa14.32□□□□□ -0.12
LINC00539-204ENST00000608957 UBE2Q2LH0YL09 131 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms