RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 CCL15Q16663 113 aa12.14□□□□□ -0.47
CTCFL-220ENST00000608858 SUPT20HL1Q3ZLR7 823 aa12.14□□□□□ -0.47
CTCFL-220ENST00000608858 STRIP1Q5VSL9 837 aa12.14□□□□□ -0.47
CTCFL-220ENST00000608858 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
CTCFL-220ENST00000608858 RNF208Q9H0X6 261 aa12.14□□□□□ -0.47
CTCFL-220ENST00000608858 KDM3BQ7LBC6 1761 aa12.14□□□□□ -0.47
CTCFL-220ENST00000608858 ZSWIM8A7E2V4 1837 aa12.14□□□□□ -0.47
CTCFL-220ENST00000608858 CCL5P13501 91 aa12.13□□□□□ -0.47
CTCFL-220ENST00000608858 PPP2R1AP30153 589 aa12.13□□□□□ -0.47
CTCFL-220ENST00000608858 KIF22Q14807 665 aa12.13□□□□□ -0.47
CTCFL-220ENST00000608858 NFE2L2Q16236 605 aa12.13□□□□□ -0.47
CTCFL-220ENST00000608858 ANKRD18AQ8IVF6 992 aa12.13□□□□□ -0.47
CTCFL-220ENST00000608858 PRMT6Q96LA8 375 aaPredicted RBP12.13□□□□□ -0.47
CTCFL-220ENST00000608858 PCGF6Q9BYE7 350 aa12.13□□□□□ -0.47
CTCFL-220ENST00000608858 LAS1LQ9Y4W2 734 aaKnown RBP12.13□□□□□ -0.47
CTCFL-220ENST00000608858 LAMA3Q16787 3333 aa12.13□□□□□ -0.47
CTCFL-220ENST00000608858 AOX1Q06278 1338 aa12.12□□□□□ -0.47
CTCFL-220ENST00000608858 KLRK1P26718 216 aa12.12□□□□□ -0.47
CTCFL-220ENST00000608858 CTGFP29279 349 aa12.12□□□□□ -0.47
CTCFL-220ENST00000608858 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
CTCFL-220ENST00000608858 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
CTCFL-220ENST00000608858 ANKRD13AQ8IZ07 590 aa12.12□□□□□ -0.47
CTCFL-220ENST00000608858 ZBED3Q96IU2 234 aaPredicted RBP12.12□□□□□ -0.47
CTCFL-220ENST00000608858 MTMR10Q9NXD2 777 aa12.12□□□□□ -0.47
CTCFL-220ENST00000608858 STXBP5LQ9Y2K9 1186 aa12.12□□□□□ -0.47
CTCFL-220ENST00000608858 DLG5Q8TDM6 1919 aa12.11□□□□□ -0.47
CTCFL-220ENST00000608858 SSC5DA1L4H1 1573 aa12.11□□□□□ -0.47
CTCFL-220ENST00000608858 GJA8P48165 433 aa12.11□□□□□ -0.47
CTCFL-220ENST00000608858 RASA3Q14644 834 aa12.11□□□□□ -0.47
CTCFL-220ENST00000608858 UBE2Q1Q7Z7E8 422 aa12.11□□□□□ -0.47
CTCFL-220ENST00000608858 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTCFL-220ENST00000608858 MINPP1Q9UNW1 487 aa12.11□□□□□ -0.47
CTCFL-220ENST00000608858 FARP2O94887 1054 aaPredicted RBP12.1□□□□□ -0.47
CTCFL-220ENST00000608858 FMNL1O95466 1100 aaPredicted RBP12.1□□□□□ -0.47
CTCFL-220ENST00000608858 TFRCP02786 760 aaKnown RBP12.1□□□□□ -0.47
CTCFL-220ENST00000608858 GJB1P08034 283 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 GRK4P32298 578 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 PSMC4P43686 418 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 CCT4P50991 539 aaKnown RBP12.1□□□□□ -0.47
CTCFL-220ENST00000608858 RBM5P52756 815 aaKnown RBP eCLIP12.1□□□□□ -0.47
CTCFL-220ENST00000608858 CFAP100Q494V2 611 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 RIC3Q7Z5B4 369 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 CDAN1Q8IWY9 1227 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 ZBTB38Q8NAP3 1195 aaPredicted RBP12.1□□□□□ -0.47
CTCFL-220ENST00000608858 NKX2-3Q8TAU0 364 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 RAET1EQ8TD07 263 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 PLEKHF1Q96S99 279 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 COA1Q9GZY4 146 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 CPA4Q9UI42 421 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 JAG2Q9Y219 1238 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 MYO3BQ8WXR4 1341 aa12.1□□□□□ -0.47
CTCFL-220ENST00000608858 PSME4Q14997 1843 aa12.09□□□□□ -0.47
CTCFL-220ENST00000608858 TLR2O60603 784 aa12.09□□□□□ -0.47
CTCFL-220ENST00000608858 PDE8AO60658 829 aa12.09□□□□□ -0.47
CTCFL-220ENST00000608858 BCAMP50895 628 aa12.09□□□□□ -0.47
CTCFL-220ENST00000608858 GTF2A2P52657 109 aa12.09□□□□□ -0.47
CTCFL-220ENST00000608858 RIPK4P57078 832 aa12.09□□□□□ -0.47
CTCFL-220ENST00000608858 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.09□□□□□ -0.47
CTCFL-220ENST00000608858 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
CTCFL-220ENST00000608858 MYD88Q99836 296 aa12.09□□□□□ -0.47
CTCFL-220ENST00000608858 UNC93B1Q9H1C4 597 aa12.09□□□□□ -0.47
CTCFL-220ENST00000608858 RAPGEFL1Q9UHV5 662 aa12.09□□□□□ -0.47
CTCFL-220ENST00000608858 ZMYND8Q9ULU4 1186 aaPredicted RBP12.09□□□□□ -0.47
CTCFL-220ENST00000608858 RIPOR2Q9Y4F9 1068 aa12.09□□□□□ -0.47
CTCFL-220ENST00000608858 A0A1W2PPC1 479 aa12.08□□□□□ -0.48
CTCFL-220ENST00000608858 SNAP23O00161 211 aa12.08□□□□□ -0.48
CTCFL-220ENST00000608858 SYN1P17600 705 aa12.08□□□□□ -0.48
CTCFL-220ENST00000608858 OSBPP22059 807 aa12.08□□□□□ -0.48
CTCFL-220ENST00000608858 CERS5Q8N5B7 392 aa12.08□□□□□ -0.48
CTCFL-220ENST00000608858 U2AF1L4Q8WU68 220 aaKnown RBP12.08□□□□□ -0.48
CTCFL-220ENST00000608858 FAM161BQ96MY7 647 aa12.08□□□□□ -0.48
CTCFL-220ENST00000608858 SRRDQ9UH36 339 aa12.08□□□□□ -0.48
CTCFL-220ENST00000608858 UNCXA6NJT0 531 aa12.07□□□□□ -0.48
CTCFL-220ENST00000608858 BTBD19C9JJ37 291 aa12.07□□□□□ -0.48
CTCFL-220ENST00000608858 MYO1BO43795 1136 aa12.07□□□□□ -0.48
CTCFL-220ENST00000608858 WDHD1O75717 1129 aaPredicted RBP12.07□□□□□ -0.48
CTCFL-220ENST00000608858 SGPL1O95470 568 aa12.07□□□□□ -0.48
CTCFL-220ENST00000608858 MAP3K9P80192 1104 aa12.07□□□□□ -0.48
CTCFL-220ENST00000608858 TRIM28Q13263 835 aaKnown RBP12.07□□□□□ -0.48
CTCFL-220ENST00000608858 VGLL4Q14135 290 aa12.07□□□□□ -0.48
CTCFL-220ENST00000608858 HDGFL1Q5TGJ6 251 aa12.07□□□□□ -0.48
CTCFL-220ENST00000608858 PRDM6Q9NQX0 595 aa12.07□□□□□ -0.48
CTCFL-220ENST00000608858 NEUROD2Q15784 382 aa12.06□□□□□ -0.48
CTCFL-220ENST00000608858 C7orf61Q8IZ16 206 aa12.06□□□□□ -0.48
CTCFL-220ENST00000608858 PIP4P2Q8N4L2 257 aa12.06□□□□□ -0.48
CTCFL-220ENST00000608858 PAWRQ96IZ0 340 aaKnown RBP12.06□□□□□ -0.48
CTCFL-220ENST00000608858 PHAXQ9H814 394 aaKnown RBP12.06□□□□□ -0.48
CTCFL-220ENST00000608858 PPP2R3BQ9Y5P8 575 aa12.06□□□□□ -0.48
CTCFL-220ENST00000608858 VCANP13611 3396 aa12.05□□□□□ -0.48
CTCFL-220ENST00000608858 MED23Q9ULK4 1368 aa12.05□□□□□ -0.48
CTCFL-220ENST00000608858 TCP10L2B9ZVM9 353 aa12.05□□□□□ -0.48
CTCFL-220ENST00000608858 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
CTCFL-220ENST00000608858 UBXN2AP68543 259 aa12.05□□□□□ -0.48
CTCFL-220ENST00000608858 DEFB118Q96PH6 123 aa12.05□□□□□ -0.48
CTCFL-220ENST00000608858 GDF15Q99988 308 aa12.05□□□□□ -0.48
CTCFL-220ENST00000608858 GREM2Q9H772 168 aa12.05□□□□□ -0.48
CTCFL-220ENST00000608858 TDRD3Q9H7E2 651 aaKnown RBP12.05□□□□□ -0.48
CTCFL-220ENST00000608858 BSDC1Q9NW68 430 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-220ENST00000608858 GABRQQ9UN88 632 aa12.05□□□□□ -0.48
CTCFL-220ENST00000608858 ZNF804BA4D1E1 1349 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms