RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 TAF1DQ9H5J8 278 aaPredicted RBP17.53■□□□□ 0.4
CTSA-219ENST00000607841 CNOT7Q9UIV1 285 aaKnown RBP17.53■□□□□ 0.4
CTSA-219ENST00000607841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
CTSA-219ENST00000607841 ZNF609O15014 1411 aa17.53■□□□□ 0.4
CTSA-219ENST00000607841 WDR90Q96KV7 1748 aa17.52■□□□□ 0.4
CTSA-219ENST00000607841 CCDC158Q5M9N0 1113 aa17.52■□□□□ 0.4
CTSA-219ENST00000607841 IFFO2Q5TF58 517 aa17.52■□□□□ 0.4
CTSA-219ENST00000607841 MICALL2Q8IY33 904 aa17.52■□□□□ 0.4
CTSA-219ENST00000607841 OGFOD1Q8N543 542 aa17.52■□□□□ 0.4
CTSA-219ENST00000607841 LRRCC1Q9C099 1032 aa17.52■□□□□ 0.4
CTSA-219ENST00000607841 RWDD1Q9H446 243 aaPredicted RBP17.52■□□□□ 0.4
CTSA-219ENST00000607841 ADARB2Q9NS39 739 aaKnown RBP17.52■□□□□ 0.4
CTSA-219ENST00000607841 DENND2AQ9ULE3 1009 aa17.52■□□□□ 0.4
CTSA-219ENST00000607841 IQSEC3Q9UPP2 1182 aaPredicted RBP17.52■□□□□ 0.4
CTSA-219ENST00000607841 USP17L8P0C7I0 530 aa17.51■□□□□ 0.39
CTSA-219ENST00000607841 UQCRFS1P1P0C7P4 283 aa17.51■□□□□ 0.39
CTSA-219ENST00000607841 EPS15P42566 896 aa17.51■□□□□ 0.39
CTSA-219ENST00000607841 PHKA1P46020 1223 aa17.51■□□□□ 0.39
CTSA-219ENST00000607841 CHAF1AQ13111 956 aaPredicted RBP17.51■□□□□ 0.39
CTSA-219ENST00000607841 USP50Q70EL3 339 aaPredicted RBP17.51■□□□□ 0.39
CTSA-219ENST00000607841 EAF2Q96CJ1 260 aaPredicted RBP17.51■□□□□ 0.39
CTSA-219ENST00000607841 GMLQ99445 158 aa17.51■□□□□ 0.39
CTSA-219ENST00000607841 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
CTSA-219ENST00000607841 HDAC9Q9UKV0 1011 aa17.51■□□□□ 0.39
CTSA-219ENST00000607841 TOMM70O94826 608 aa17.5■□□□□ 0.39
CTSA-219ENST00000607841 IFIT2P09913 472 aaKnown RBP17.5■□□□□ 0.39
CTSA-219ENST00000607841 MFSD14BQ5SR56 506 aa17.5■□□□□ 0.39
CTSA-219ENST00000607841 AACSQ86V21 672 aa17.5■□□□□ 0.39
CTSA-219ENST00000607841 WDR66Q8TBY9 1149 aa17.5■□□□□ 0.39
CTSA-219ENST00000607841 GCC1Q96CN9 775 aa17.5■□□□□ 0.39
CTSA-219ENST00000607841 CCDC8Q9H0W5 538 aaPredicted RBP17.5■□□□□ 0.39
CTSA-219ENST00000607841 JAG2Q9Y219 1238 aa17.5■□□□□ 0.39
CTSA-219ENST00000607841 EAPPQ56P03 285 aaPredicted RBP17.49■□□□□ 0.39
CTSA-219ENST00000607841 TTC39AQ5SRH9 613 aa17.49■□□□□ 0.39
CTSA-219ENST00000607841 DBNDD2Q9BQY9 259 aa17.49■□□□□ 0.39
CTSA-219ENST00000607841 MXD3Q9BW11 206 aa17.49■□□□□ 0.39
CTSA-219ENST00000607841 ZBTB47Q9UFB7 747 aaPredicted RBP17.49■□□□□ 0.39
CTSA-219ENST00000607841 ZNF280AP59817 542 aaPredicted RBP17.48■□□□□ 0.39
CTSA-219ENST00000607841 KIAA0825Q8IV33 1275 aa17.48■□□□□ 0.39
CTSA-219ENST00000607841 DBNLQ9UJU6 430 aaKnown RBP17.48■□□□□ 0.39
CTSA-219ENST00000607841 SUGT1Q9Y2Z0 365 aa17.48■□□□□ 0.39
CTSA-219ENST00000607841 PDS5AQ29RF7 1337 aaKnown RBP17.47■□□□□ 0.39
CTSA-219ENST00000607841 NEFLP07196 543 aa17.47■□□□□ 0.39
CTSA-219ENST00000607841 ARID4AP29374 1257 aaPredicted RBP17.47■□□□□ 0.39
CTSA-219ENST00000607841 LDHDQ86WU2 507 aa17.47■□□□□ 0.39
CTSA-219ENST00000607841 ZGPATQ8N5A5 531 aaKnown RBP17.47■□□□□ 0.39
CTSA-219ENST00000607841 CERS5Q8N5B7 392 aa17.47■□□□□ 0.39
CTSA-219ENST00000607841 RBM46Q8TBY0 533 aaKnown RBP17.47■□□□□ 0.39
CTSA-219ENST00000607841 ZNF512BQ96KM6 892 aaPredicted RBP17.47■□□□□ 0.39
CTSA-219ENST00000607841 BCL11AQ9H165 835 aa17.47■□□□□ 0.39
CTSA-219ENST00000607841 CLEC11AQ9Y240 323 aa17.47■□□□□ 0.39
CTSA-219ENST00000607841 RASGRF1Q13972 1273 aa17.46■□□□□ 0.39
CTSA-219ENST00000607841 SAMD7Q7Z3H4 446 aa17.46■□□□□ 0.39
CTSA-219ENST00000607841 MYOZ2Q9NPC6 264 aa17.46■□□□□ 0.39
CTSA-219ENST00000607841 SCN4AP35499 1836 aa17.46■□□□□ 0.39
CTSA-219ENST00000607841 SCN9AQ15858 1988 aa17.46■□□□□ 0.39
CTSA-219ENST00000607841 SALL1Q9NSC2 1324 aa17.46■□□□□ 0.38
CTSA-219ENST00000607841 SHTN1A0MZ66 631 aa17.45■□□□□ 0.38
CTSA-219ENST00000607841 F8W031 263 aaPredicted RBP17.45■□□□□ 0.38
CTSA-219ENST00000607841 KIF4BQ2VIQ3 1234 aa17.45■□□□□ 0.38
CTSA-219ENST00000607841 TBC1D10BQ4KMP7 808 aaPredicted RBP17.45■□□□□ 0.38
CTSA-219ENST00000607841 RBM26Q5T8P6 1007 aaKnown RBP17.45■□□□□ 0.38
CTSA-219ENST00000607841 SPATA5Q8NB90 893 aa17.45■□□□□ 0.38
CTSA-219ENST00000607841 SMC1BQ8NDV3 1235 aa17.45■□□□□ 0.38
CTSA-219ENST00000607841 ZC3H15Q8WU90 426 aaKnown RBP17.45■□□□□ 0.38
CTSA-219ENST00000607841 TLR7Q9NYK1 1049 aaKnown RBP17.45■□□□□ 0.38
CTSA-219ENST00000607841 HMG20BQ9P0W2 317 aa17.45■□□□□ 0.38
CTSA-219ENST00000607841 TTF2Q9UNY4 1162 aaKnown RBP17.45■□□□□ 0.38
CTSA-219ENST00000607841 MAST3O60307 1309 aa17.45■□□□□ 0.38
CTSA-219ENST00000607841 SMARCA5O60264 1052 aaPredicted RBP17.44■□□□□ 0.38
CTSA-219ENST00000607841 SPTY2D1Q68D10 685 aaPredicted RBP17.44■□□□□ 0.38
CTSA-219ENST00000607841 CHADLQ6NUI6 762 aa17.44■□□□□ 0.38
CTSA-219ENST00000607841 TRPM4Q8TD43 1214 aa17.44■□□□□ 0.38
CTSA-219ENST00000607841 LDHBP07195 334 aaKnown RBP17.43■□□□□ 0.38
CTSA-219ENST00000607841 MCAMP43121 646 aa17.43■□□□□ 0.38
CTSA-219ENST00000607841 FSTL1Q12841 308 aa17.43■□□□□ 0.38
CTSA-219ENST00000607841 ANKRD45Q5TZF3 282 aa17.43■□□□□ 0.38
CTSA-219ENST00000607841 GPATCH3Q96I76 525 aa17.43■□□□□ 0.38
CTSA-219ENST00000607841 MRIQ9BWK5 157 aa17.43■□□□□ 0.38
CTSA-219ENST00000607841 SERPINA10Q9UK55 444 aa17.43■□□□□ 0.38
CTSA-219ENST00000607841 ARAP2Q8WZ64 1704 aa17.43■□□□□ 0.38
CTSA-219ENST00000607841 IGHDP01880 384 aa17.42■□□□□ 0.38
CTSA-219ENST00000607841 POTEIP0CG38 1075 aa17.42■□□□□ 0.38
CTSA-219ENST00000607841 POTEJP0CG39 1038 aa17.42■□□□□ 0.38
CTSA-219ENST00000607841 HIRAP54198 1017 aaPredicted RBP17.42■□□□□ 0.38
CTSA-219ENST00000607841 HDLBPQ00341 1268 aaKnown RBP17.42■□□□□ 0.38
CTSA-219ENST00000607841 DLGAP5Q15398 846 aa17.42■□□□□ 0.38
CTSA-219ENST00000607841 SMC5Q8IY18 1101 aa17.42■□□□□ 0.38
CTSA-219ENST00000607841 MTMR14Q8NCE2 650 aa17.42■□□□□ 0.38
CTSA-219ENST00000607841 ABCF2Q9UG63 623 aa17.42■□□□□ 0.38
CTSA-219ENST00000607841 PSME4Q14997 1843 aa17.42■□□□□ 0.38
CTSA-219ENST00000607841 IGSF3O75054 1194 aa17.41■□□□□ 0.38
CTSA-219ENST00000607841 EGFRP00533 1210 aa17.41■□□□□ 0.38
CTSA-219ENST00000607841 RBM5P52756 815 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTSA-219ENST00000607841 SCARF1Q14162 830 aa17.41■□□□□ 0.38
CTSA-219ENST00000607841 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTSA-219ENST00000607841 PGAP2Q9UHJ9 254 aa17.41■□□□□ 0.38
CTSA-219ENST00000607841 COL1A1P02452 1464 aaPredicted RBP17.41■□□□□ 0.38
CTSA-219ENST00000607841 MYO1BO43795 1136 aa17.4■□□□□ 0.38
CTSA-219ENST00000607841 CFAP100Q494V2 611 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms