RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ZBTB22O15209 634 aa25.83■■□□□ 1.73
USP6NL-204ENST00000606752 HSPD1P10809 573 aaKnown RBP25.83■■□□□ 1.73
USP6NL-204ENST00000606752 NPR1P16066 1061 aa25.83■■□□□ 1.73
USP6NL-204ENST00000606752 VPS53Q5VIR6 699 aa25.83■■□□□ 1.73
USP6NL-204ENST00000606752 WWC3Q9ULE0 1092 aa25.83■■□□□ 1.73
USP6NL-204ENST00000606752 ZNF532Q9HCE3 1301 aa25.82■■□□□ 1.72
USP6NL-204ENST00000606752 CCDC125Q86Z20 511 aa25.82■■□□□ 1.72
USP6NL-204ENST00000606752 TCRBV5S4A2TA0A5A2 114 aa25.81■■□□□ 1.72
USP6NL-204ENST00000606752 GPSM2P81274 684 aa25.81■■□□□ 1.72
USP6NL-204ENST00000606752 ADCK5Q3MIX3 580 aa25.81■■□□□ 1.72
USP6NL-204ENST00000606752 JAKMIP1Q96N16 626 aaKnown RBP25.81■■□□□ 1.72
USP6NL-204ENST00000606752 ATP2B4P23634 1241 aa25.81■■□□□ 1.72
USP6NL-204ENST00000606752 PSMA5P28066 241 aa25.81■■□□□ 1.72
USP6NL-204ENST00000606752 C15orf52Q6ZUT6 534 aaKnown RBP25.81■■□□□ 1.72
USP6NL-204ENST00000606752 ZSWIM6Q9HCJ5 1215 aa25.81■■□□□ 1.72
USP6NL-204ENST00000606752 LRP2BPQ9P2M1 347 aa25.81■■□□□ 1.72
USP6NL-204ENST00000606752 NSFL1CQ9UNZ2 370 aaKnown RBP25.81■■□□□ 1.72
USP6NL-204ENST00000606752 PDS5AQ29RF7 1337 aaKnown RBP25.8■■□□□ 1.72
USP6NL-204ENST00000606752 FRAT2O75474 233 aaPredicted RBP25.8■■□□□ 1.72
USP6NL-204ENST00000606752 HSP90AA1P07900 732 aaKnown RBP25.8■■□□□ 1.72
USP6NL-204ENST00000606752 CASTP20810 708 aaKnown RBP25.8■■□□□ 1.72
USP6NL-204ENST00000606752 ALDH1B1P30837 517 aa25.8■■□□□ 1.72
USP6NL-204ENST00000606752 SLC51AQ86UW1 340 aa25.8■■□□□ 1.72
USP6NL-204ENST00000606752 TXNRD3Q86VQ6 643 aa25.8■■□□□ 1.72
USP6NL-204ENST00000606752 PODXL2Q9NZ53 605 aa25.8■■□□□ 1.72
USP6NL-204ENST00000606752 GPAA1O43292 621 aa25.79■■□□□ 1.72
USP6NL-204ENST00000606752 SP8Q8IXZ3 490 aa25.79■■□□□ 1.72
USP6NL-204ENST00000606752 MAGEB6Q8N7X4 407 aa25.79■■□□□ 1.72
USP6NL-204ENST00000606752 QSER1Q2KHR3 1735 aa25.79■■□□□ 1.72
USP6NL-204ENST00000606752 ANKRD31Q8N7Z5 1873 aa25.79■■□□□ 1.72
USP6NL-204ENST00000606752 KRT32Q14532 448 aa25.79■■□□□ 1.72
USP6NL-204ENST00000606752 MASTLQ96GX5 879 aa25.79■■□□□ 1.72
USP6NL-204ENST00000606752 CYP46A1Q9Y6A2 500 aa25.79■■□□□ 1.72
USP6NL-204ENST00000606752 MYH7P12883 1935 aa25.78■■□□□ 1.72
USP6NL-204ENST00000606752 PPEF1O14829 653 aaPredicted RBP25.78■■□□□ 1.72
USP6NL-204ENST00000606752 TTC14Q96N46 770 aa25.78■■□□□ 1.72
USP6NL-204ENST00000606752 GGA1Q9UJY5 639 aa25.78■■□□□ 1.72
USP6NL-204ENST00000606752 CYP21A2P08686 494 aa25.77■■□□□ 1.72
USP6NL-204ENST00000606752 ABCF2Q9UG63 623 aa25.77■■□□□ 1.72
USP6NL-204ENST00000606752 ATP6V0A2Q9Y487 856 aa25.77■■□□□ 1.72
USP6NL-204ENST00000606752 RPAP1Q9BWH6 1393 aaPredicted RBP25.77■■□□□ 1.72
USP6NL-204ENST00000606752 COL1A1P02452 1464 aaPredicted RBP25.77■■□□□ 1.72
USP6NL-204ENST00000606752 RUFY3Q7L099 469 aa25.77■■□□□ 1.72
USP6NL-204ENST00000606752 CTNNA3Q9UI47 895 aa25.77■■□□□ 1.72
USP6NL-204ENST00000606752 UFL1O94874 794 aa25.76■■□□□ 1.71
USP6NL-204ENST00000606752 TAF6LQ9Y6J9 622 aa25.76■■□□□ 1.71
USP6NL-204ENST00000606752 FOXP2O15409 715 aa25.75■■□□□ 1.71
USP6NL-204ENST00000606752 TMX3Q96JJ7 454 aa25.75■■□□□ 1.71
USP6NL-204ENST00000606752 ZNF804AQ7Z570 1209 aa25.74■■□□□ 1.71
USP6NL-204ENST00000606752 AIDAQ96BJ3 306 aa25.74■■□□□ 1.71
USP6NL-204ENST00000606752 MYO5AQ9Y4I1 1855 aaKnown RBP25.74■■□□□ 1.71
USP6NL-204ENST00000606752 DOCK2Q92608 1830 aa25.74■■□□□ 1.71
USP6NL-204ENST00000606752 CPA1P15085 419 aa25.74■■□□□ 1.71
USP6NL-204ENST00000606752 BLOC1S2Q6QNY1 142 aa25.74■■□□□ 1.71
USP6NL-204ENST00000606752 TDRD7Q8NHU6 1098 aaKnown RBP25.74■■□□□ 1.71
USP6NL-204ENST00000606752 TBC1D16Q8TBP0 767 aa25.74■■□□□ 1.71
USP6NL-204ENST00000606752 STRBPQ96SI9 672 aaKnown RBP25.74■■□□□ 1.71
USP6NL-204ENST00000606752 PDRG1Q9NUG6 133 aa25.74■■□□□ 1.71
USP6NL-204ENST00000606752 RAI14Q9P0K7 980 aa25.74■■□□□ 1.71
USP6NL-204ENST00000606752 H0YIN7 160 aa25.73■■□□□ 1.71
USP6NL-204ENST00000606752 DDIT3P35638 169 aa25.73■■□□□ 1.71
USP6NL-204ENST00000606752 C2CD5Q86YS7 1000 aa25.73■■□□□ 1.71
USP6NL-204ENST00000606752 SLC16A10Q8TF71 515 aa25.73■■□□□ 1.71
USP6NL-204ENST00000606752 PDGFDQ9GZP0 370 aaPredicted RBP25.73■■□□□ 1.71
USP6NL-204ENST00000606752 CHMP5Q9NZZ3 219 aa25.73■■□□□ 1.71
USP6NL-204ENST00000606752 POLLQ9UGP5 575 aa25.73■■□□□ 1.71
USP6NL-204ENST00000606752 FGAP02671 866 aa25.72■■□□□ 1.71
USP6NL-204ENST00000606752 AK2P54819 239 aa25.72■■□□□ 1.71
USP6NL-204ENST00000606752 STYK1Q6J9G0 422 aa25.72■■□□□ 1.71
USP6NL-204ENST00000606752 NEK1Q96PY6 1258 aa25.72■■□□□ 1.71
USP6NL-204ENST00000606752 FOXD4L1Q9NU39 408 aa25.72■■□□□ 1.71
USP6NL-204ENST00000606752 CYP7A1P22680 504 aa25.71■■□□□ 1.71
USP6NL-204ENST00000606752 CHAF1AQ13111 956 aaPredicted RBP25.71■■□□□ 1.71
USP6NL-204ENST00000606752 ZNF622Q969S3 477 aaKnown RBP eCLIP25.71■■□□□ 1.71
USP6NL-204ENST00000606752 GPR101Q96P66 508 aaPredicted RBP25.71■■□□□ 1.71
USP6NL-204ENST00000606752 TTLL5Q6EMB2 1281 aa25.7■■□□□ 1.71
USP6NL-204ENST00000606752 TMX4Q9H1E5 349 aaPredicted RBP25.7■■□□□ 1.71
USP6NL-204ENST00000606752 C6orf229H3BNL8 230 aa25.7■■□□□ 1.7
USP6NL-204ENST00000606752 MBD4O95243 580 aa25.7■■□□□ 1.7
USP6NL-204ENST00000606752 RPS6KB1P23443 525 aa25.7■■□□□ 1.7
USP6NL-204ENST00000606752 CUL4AQ13619 759 aa25.7■■□□□ 1.7
USP6NL-204ENST00000606752 IMMTQ16891 758 aaKnown RBP25.7■■□□□ 1.7
USP6NL-204ENST00000606752 NOL8Q76FK4 1167 aaKnown RBP25.7■■□□□ 1.7
USP6NL-204ENST00000606752 WDR66Q8TBY9 1149 aa25.7■■□□□ 1.7
USP6NL-204ENST00000606752 ALDH8A1Q9H2A2 487 aaPredicted RBP25.7■■□□□ 1.7
USP6NL-204ENST00000606752 CIZ1Q9ULV3 898 aaPredicted RBP25.7■■□□□ 1.7
USP6NL-204ENST00000606752 LIMCH1Q9UPQ0 1083 aa25.7■■□□□ 1.7
USP6NL-204ENST00000606752 IGSF3O75054 1194 aa25.69■■□□□ 1.7
USP6NL-204ENST00000606752 TMED8Q6PL24 325 aaPredicted RBP25.69■■□□□ 1.7
USP6NL-204ENST00000606752 CD209Q9NNX6 404 aa25.69■■□□□ 1.7
USP6NL-204ENST00000606752 PATL2C9JE40 543 aaKnown RBP25.68■■□□□ 1.7
USP6NL-204ENST00000606752 APPP05067 770 aa25.68■■□□□ 1.7
USP6NL-204ENST00000606752 HMGB1P09429 215 aaKnown RBP25.68■■□□□ 1.7
USP6NL-204ENST00000606752 GNAT2P19087 354 aa25.68■■□□□ 1.7
USP6NL-204ENST00000606752 MPNDQ8N594 471 aa25.68■■□□□ 1.7
USP6NL-204ENST00000606752 ZGPATQ8N5A5 531 aaKnown RBP25.68■■□□□ 1.7
USP6NL-204ENST00000606752 SALL1Q9NSC2 1324 aa25.68■■□□□ 1.7
USP6NL-204ENST00000606752 ALX1Q15699 326 aa25.67■■□□□ 1.7
USP6NL-204ENST00000606752 SPTY2D1Q68D10 685 aaPredicted RBP25.67■■□□□ 1.7
USP6NL-204ENST00000606752 NAA16Q6N069 864 aaPredicted RBP25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms