RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 SSC5DA1L4H1 1573 aa17.13■□□□□ 0.33
CTSA-212ENST00000606394 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
CTSA-212ENST00000606394 SPEF2Q9C093 1822 aa17.12■□□□□ 0.33
CTSA-212ENST00000606394 EN2P19622 333 aaPredicted RBP17.12■□□□□ 0.33
CTSA-212ENST00000606394 IREB2P48200 963 aaKnown RBP17.12■□□□□ 0.33
CTSA-212ENST00000606394 CLMNQ96JQ2 1002 aa17.12■□□□□ 0.33
CTSA-212ENST00000606394 TMEM106CQ9BVX2 250 aa17.12■□□□□ 0.33
CTSA-212ENST00000606394 TRIOBPQ9H2D6 2365 aa17.12■□□□□ 0.33
CTSA-212ENST00000606394 ECM29Q5VYK3 1845 aa17.12■□□□□ 0.33
CTSA-212ENST00000606394 FKBP1AP62942 108 aaKnown RBP17.11■□□□□ 0.33
CTSA-212ENST00000606394 NBPF11Q86T75 865 aa17.11■□□□□ 0.33
CTSA-212ENST00000606394 ANKRD13AQ8IZ07 590 aa17.11■□□□□ 0.33
CTSA-212ENST00000606394 ZNF333Q96JL9 665 aa17.11■□□□□ 0.33
CTSA-212ENST00000606394 MPHOSPH8Q99549 860 aa17.11■□□□□ 0.33
CTSA-212ENST00000606394 PLA2G12BQ9BX93 195 aa17.11■□□□□ 0.33
CTSA-212ENST00000606394 CD209Q9NNX6 404 aa17.11■□□□□ 0.33
CTSA-212ENST00000606394 FZD1Q9UP38 647 aa17.11■□□□□ 0.33
CTSA-212ENST00000606394 ADAMTS8Q9UP79 889 aa17.11■□□□□ 0.33
CTSA-212ENST00000606394 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
CTSA-212ENST00000606394 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
CTSA-212ENST00000606394 H7C1W4 665 aa17.1■□□□□ 0.33
CTSA-212ENST00000606394 ELL2O00472 640 aaPredicted RBP17.1■□□□□ 0.33
CTSA-212ENST00000606394 KCNJ4P48050 445 aa17.1■□□□□ 0.33
CTSA-212ENST00000606394 C15orf52Q6ZUT6 534 aaKnown RBP17.1■□□□□ 0.33
CTSA-212ENST00000606394 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
CTSA-212ENST00000606394 RANBP2P49792 3224 aaKnown RBP17.1■□□□□ 0.33
CTSA-212ENST00000606394 SPDYE2BA6NHP3 402 aa17.09■□□□□ 0.33
CTSA-212ENST00000606394 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
CTSA-212ENST00000606394 SPDYE6P0CI01 402 aa17.09■□□□□ 0.33
CTSA-212ENST00000606394 ITGA6P23229 1130 aa17.09■□□□□ 0.33
CTSA-212ENST00000606394 KLRK1P26718 216 aa17.09■□□□□ 0.33
CTSA-212ENST00000606394 PTPN18Q99952 460 aa17.09■□□□□ 0.33
CTSA-212ENST00000606394 USP2O75604 605 aaPredicted RBP17.08■□□□□ 0.32
CTSA-212ENST00000606394 UBE3BQ7Z3V4 1068 aa17.08■□□□□ 0.32
CTSA-212ENST00000606394 CERS5Q8N5B7 392 aa17.08■□□□□ 0.32
CTSA-212ENST00000606394 C8orf58Q8NAV2 365 aa17.08■□□□□ 0.32
CTSA-212ENST00000606394 IRS2Q9Y4H2 1338 aa17.07■□□□□ 0.32
CTSA-212ENST00000606394 CSF1RP07333 972 aa17.07■□□□□ 0.32
CTSA-212ENST00000606394 IL1R1P14778 569 aa17.07■□□□□ 0.32
CTSA-212ENST00000606394 GJA5P36382 358 aa17.07■□□□□ 0.32
CTSA-212ENST00000606394 CHRNDQ07001 517 aa17.07■□□□□ 0.32
CTSA-212ENST00000606394 TNFAIP1Q13829 316 aa17.07■□□□□ 0.32
CTSA-212ENST00000606394 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
CTSA-212ENST00000606394 SLC9C1Q4G0N8 1177 aa17.07■□□□□ 0.32
CTSA-212ENST00000606394 NBPF12Q5TAG4 269 aaPredicted RBP17.07■□□□□ 0.32
CTSA-212ENST00000606394 COLQQ9Y215 455 aaPredicted RBP17.07■□□□□ 0.32
CTSA-212ENST00000606394 CWF19L2Q2TBE0 894 aaKnown RBP17.06■□□□□ 0.32
CTSA-212ENST00000606394 ZNF804AQ7Z570 1209 aa17.06■□□□□ 0.32
CTSA-212ENST00000606394 PRMT6Q96LA8 375 aaPredicted RBP17.06■□□□□ 0.32
CTSA-212ENST00000606394 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
CTSA-212ENST00000606394 VEZTQ9HBM0 779 aa17.06■□□□□ 0.32
CTSA-212ENST00000606394 CLRN2A0PK11 232 aa17.05■□□□□ 0.32
CTSA-212ENST00000606394 RASA3Q14644 834 aa17.05■□□□□ 0.32
CTSA-212ENST00000606394 OPTNQ96CV9 577 aa17.05■□□□□ 0.32
CTSA-212ENST00000606394 MS4A4AQ96JQ5 239 aa17.05■□□□□ 0.32
CTSA-212ENST00000606394 ZFYVE28Q9HCC9 887 aa17.05■□□□□ 0.32
CTSA-212ENST00000606394 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
CTSA-212ENST00000606394 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
CTSA-212ENST00000606394 GTF2A2P52657 109 aa17.04■□□□□ 0.32
CTSA-212ENST00000606394 GCKRQ14397 625 aa17.04■□□□□ 0.32
CTSA-212ENST00000606394 ANKRD18BA2A2Z9 1011 aa17.03■□□□□ 0.32
CTSA-212ENST00000606394 GNRH1P01148 92 aa17.03■□□□□ 0.32
CTSA-212ENST00000606394 CAP1Q01518 475 aa17.03■□□□□ 0.32
CTSA-212ENST00000606394 SLC4A8Q2Y0W8 1093 aa17.03■□□□□ 0.32
CTSA-212ENST00000606394 MYH16Q9H6N6 1097 aa17.03■□□□□ 0.32
CTSA-212ENST00000606394 PCDHAC2Q9Y5I4 1007 aa17.03■□□□□ 0.32
CTSA-212ENST00000606394 PTCH2Q9Y6C5 1203 aa17.03■□□□□ 0.32
CTSA-212ENST00000606394 F8W031 263 aaPredicted RBP17.02■□□□□ 0.32
CTSA-212ENST00000606394 APAF1O14727 1248 aa17.02■□□□□ 0.32
CTSA-212ENST00000606394 CASP7P55210 303 aa17.02■□□□□ 0.32
CTSA-212ENST00000606394 TAF1CQ15572 869 aaPredicted RBP17.02■□□□□ 0.32
CTSA-212ENST00000606394 BRI3BPQ8WY22 251 aa17.02■□□□□ 0.32
CTSA-212ENST00000606394 ELP3Q9H9T3 547 aa17.02■□□□□ 0.32
CTSA-212ENST00000606394 ZCCHC17Q9NP64 241 aaKnown RBP17.02■□□□□ 0.32
CTSA-212ENST00000606394 SERPINA10Q9UK55 444 aa17.02■□□□□ 0.32
CTSA-212ENST00000606394 OTOFQ9HC10 1997 aa17.02■□□□□ 0.31
CTSA-212ENST00000606394 A0A0C4DFX4 3053 aa17.02■□□□□ 0.31
CTSA-212ENST00000606394 CCL15-CCL14A0A0B4J2E2 113 aa17.01■□□□□ 0.31
CTSA-212ENST00000606394 RBM5P52756 815 aaKnown RBP eCLIP17.01■□□□□ 0.31
CTSA-212ENST00000606394 PRMT2P55345 433 aa17.01■□□□□ 0.31
CTSA-212ENST00000606394 CCL15Q16663 113 aa17.01■□□□□ 0.31
CTSA-212ENST00000606394 SPDYE2Q495Y8 402 aa17.01■□□□□ 0.31
CTSA-212ENST00000606394 TSPYL6Q8N831 410 aa17.01■□□□□ 0.31
CTSA-212ENST00000606394 OTUD5Q96G74 571 aa17.01■□□□□ 0.31
CTSA-212ENST00000606394 FAM205AQ6ZU69 1335 aa17■□□□□ 0.31
CTSA-212ENST00000606394 H0YGN5 161 aa17■□□□□ 0.31
CTSA-212ENST00000606394 MAP3K9P80192 1104 aa17■□□□□ 0.31
CTSA-212ENST00000606394 IFIT5Q13325 482 aaKnown RBP17■□□□□ 0.31
CTSA-212ENST00000606394 KIF22Q14807 665 aa17■□□□□ 0.31
CTSA-212ENST00000606394 PPP1R3FQ6ZSY5 799 aaPredicted RBP17■□□□□ 0.31
CTSA-212ENST00000606394 SNAP23O00161 211 aa16.99■□□□□ 0.31
CTSA-212ENST00000606394 TLR2O60603 784 aa16.99■□□□□ 0.31
CTSA-212ENST00000606394 TAF5LO75529 589 aa16.99■□□□□ 0.31
CTSA-212ENST00000606394 TNNI2P48788 182 aa16.99■□□□□ 0.31
CTSA-212ENST00000606394 LINS1Q8NG48 757 aa16.99■□□□□ 0.31
CTSA-212ENST00000606394 TEPSINQ96N21 525 aa16.99■□□□□ 0.31
CTSA-212ENST00000606394 ZNF70Q9UC06 446 aaPredicted RBP16.99■□□□□ 0.31
CTSA-212ENST00000606394 CSADQ9Y600 493 aa16.99■□□□□ 0.31
CTSA-212ENST00000606394 AOX1Q06278 1338 aa16.98■□□□□ 0.31
CTSA-212ENST00000606394 SLC4A2P04920 1241 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms