RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 DEFB115Q30KQ5 88 aa13.39□□□□□ -0.27
TUBE1-210ENST00000604967 METTL24Q5JXM2 366 aa13.39□□□□□ -0.27
TUBE1-210ENST00000604967 ZNF408Q9H9D4 720 aa13.39□□□□□ -0.27
TUBE1-210ENST00000604967 ABT1Q9ULW3 272 aaKnown RBP13.39□□□□□ -0.27
TUBE1-210ENST00000604967 COL1A1P02452 1464 aaPredicted RBP13.39□□□□□ -0.27
TUBE1-210ENST00000604967 FAM205AQ6ZU69 1335 aa13.39□□□□□ -0.27
TUBE1-210ENST00000604967 MROH5Q6ZUA9 1318 aa13.39□□□□□ -0.27
TUBE1-210ENST00000604967 WDR33Q9C0J8 1336 aaKnown RBP13.39□□□□□ -0.27
TUBE1-210ENST00000604967 AOC2O75106 756 aa13.38□□□□□ -0.27
TUBE1-210ENST00000604967 ZNF804AQ7Z570 1209 aa13.38□□□□□ -0.27
TUBE1-210ENST00000604967 SIL1Q9H173 461 aa13.38□□□□□ -0.27
TUBE1-210ENST00000604967 PNMA6EA0A0J9YXQ4 647 aa13.37□□□□□ -0.27
TUBE1-210ENST00000604967 F8W031 263 aaPredicted RBP13.37□□□□□ -0.27
TUBE1-210ENST00000604967 HIBADHP31937 336 aaKnown RBP13.37□□□□□ -0.27
TUBE1-210ENST00000604967 COL13A1Q5TAT6 717 aaPredicted RBP13.37□□□□□ -0.27
TUBE1-210ENST00000604967 MOB2Q70IA6 237 aa13.37□□□□□ -0.27
TUBE1-210ENST00000604967 CDCA5Q96FF9 252 aa13.37□□□□□ -0.27
TUBE1-210ENST00000604967 FOXN1O15353 648 aa13.36□□□□□ -0.27
TUBE1-210ENST00000604967 ADORA1P30542 326 aa13.36□□□□□ -0.27
TUBE1-210ENST00000604967 MTX1Q13505 466 aa13.36□□□□□ -0.27
TUBE1-210ENST00000604967 DCPSQ96C86 337 aaKnown RBP13.36□□□□□ -0.27
TUBE1-210ENST00000604967 CAPNS2Q96L46 248 aa13.36□□□□□ -0.27
TUBE1-210ENST00000604967 COPRSQ9NQ92 184 aa13.36□□□□□ -0.27
TUBE1-210ENST00000604967 MYO3BQ8WXR4 1341 aa13.36□□□□□ -0.27
TUBE1-210ENST00000604967 FAM155AB1AL88 458 aaPredicted RBP13.35□□□□□ -0.27
TUBE1-210ENST00000604967 FKBP1AP62942 108 aaKnown RBP13.35□□□□□ -0.27
TUBE1-210ENST00000604967 ZKSCAN2Q63HK3 967 aa13.35□□□□□ -0.27
TUBE1-210ENST00000604967 PRMT6Q96LA8 375 aaPredicted RBP13.35□□□□□ -0.27
TUBE1-210ENST00000604967 WBP1LQ9NX94 342 aa13.35□□□□□ -0.27
TUBE1-210ENST00000604967 FZD1Q9UP38 647 aa13.35□□□□□ -0.27
TUBE1-210ENST00000604967 SSC5DA1L4H1 1573 aa13.35□□□□□ -0.27
TUBE1-210ENST00000604967 PITPNM2Q9BZ72 1349 aa13.35□□□□□ -0.27
TUBE1-210ENST00000604967 ARAP2Q8WZ64 1704 aa13.34□□□□□ -0.27
TUBE1-210ENST00000604967 CIAO1O76071 339 aa13.34□□□□□ -0.27
TUBE1-210ENST00000604967 GRM1Q13255 1194 aa13.34□□□□□ -0.27
TUBE1-210ENST00000604967 PUM3Q15397 648 aaKnown RBP13.34□□□□□ -0.27
TUBE1-210ENST00000604967 CFAP100Q494V2 611 aa13.34□□□□□ -0.27
TUBE1-210ENST00000604967 MFSD14BQ5SR56 506 aa13.34□□□□□ -0.27
TUBE1-210ENST00000604967 SULF1Q8IWU6 871 aa13.34□□□□□ -0.27
TUBE1-210ENST00000604967 CDAN1Q8IWY9 1227 aa13.34□□□□□ -0.27
TUBE1-210ENST00000604967 MTMR14Q8NCE2 650 aa13.34□□□□□ -0.27
TUBE1-210ENST00000604967 PANK1Q8TE04 598 aa13.34□□□□□ -0.27
TUBE1-210ENST00000604967 C1orf115Q9H7X2 142 aa13.34□□□□□ -0.27
TUBE1-210ENST00000604967 GBA2Q9HCG7 927 aaPredicted RBP13.34□□□□□ -0.27
TUBE1-210ENST00000604967 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
TUBE1-210ENST00000604967 IPO8O15397 1037 aaKnown RBP13.33□□□□□ -0.28
TUBE1-210ENST00000604967 SRGAP3O43295 1099 aa13.33□□□□□ -0.28
TUBE1-210ENST00000604967 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
TUBE1-210ENST00000604967 CHAF1AQ13111 956 aaPredicted RBP13.33□□□□□ -0.28
TUBE1-210ENST00000604967 CLRN2A0PK11 232 aa13.32□□□□□ -0.28
TUBE1-210ENST00000604967 ZBTB7BO15156 539 aaPredicted RBP13.32□□□□□ -0.28
TUBE1-210ENST00000604967 GNAI3P08754 354 aa13.32□□□□□ -0.28
TUBE1-210ENST00000604967 PHKA1P46020 1223 aa13.32□□□□□ -0.28
TUBE1-210ENST00000604967 HUNKP57058 714 aa13.32□□□□□ -0.28
TUBE1-210ENST00000604967 TFCP2Q12800 502 aa13.32□□□□□ -0.28
TUBE1-210ENST00000604967 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
TUBE1-210ENST00000604967 HHIPL1Q96JK4 782 aa13.32□□□□□ -0.28
TUBE1-210ENST00000604967 GNAI2P04899 355 aa13.31□□□□□ -0.28
TUBE1-210ENST00000604967 TIMM10P62072 90 aa13.31□□□□□ -0.28
TUBE1-210ENST00000604967 POLA2Q14181 598 aa13.31□□□□□ -0.28
TUBE1-210ENST00000604967 ATP2B3Q16720 1220 aa13.31□□□□□ -0.28
TUBE1-210ENST00000604967 PAXIP1Q6ZW49 1069 aaPredicted RBP13.31□□□□□ -0.28
TUBE1-210ENST00000604967 DZIP1LQ8IYY4 767 aaKnown RBP13.31□□□□□ -0.28
TUBE1-210ENST00000604967 LPIN2Q92539 896 aa13.31□□□□□ -0.28
TUBE1-210ENST00000604967 TTF2Q9UNY4 1162 aaKnown RBP13.31□□□□□ -0.28
TUBE1-210ENST00000604967 IL15P40933 162 aaPredicted RBP13.3□□□□□ -0.28
TUBE1-210ENST00000604967 DLGAP5Q15398 846 aa13.3□□□□□ -0.28
TUBE1-210ENST00000604967 C20orf194Q5TEA3 1177 aa13.3□□□□□ -0.28
TUBE1-210ENST00000604967 CEP126Q9P2H0 1117 aa13.3□□□□□ -0.28
TUBE1-210ENST00000604967 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
TUBE1-210ENST00000604967 PAPPA2Q9BXP8 1791 aa13.3□□□□□ -0.28
TUBE1-210ENST00000604967 UBE2Q2LH0YL09 131 aa13.29□□□□□ -0.28
TUBE1-210ENST00000604967 IFIT1P09914 478 aaKnown RBP13.29□□□□□ -0.28
TUBE1-210ENST00000604967 HSPA8P11142 646 aaKnown RBP13.29□□□□□ -0.28
TUBE1-210ENST00000604967 SLC5A1P13866 664 aa13.29□□□□□ -0.28
TUBE1-210ENST00000604967 CRKP46108 304 aa13.29□□□□□ -0.28
TUBE1-210ENST00000604967 RGMBQ6NW40 437 aa13.29□□□□□ -0.28
TUBE1-210ENST00000604967 DEFB129Q9H1M3 183 aa13.29□□□□□ -0.28
TUBE1-210ENST00000604967 TDRD3Q9H7E2 651 aaKnown RBP13.29□□□□□ -0.28
TUBE1-210ENST00000604967 TSKSQ9UJT2 592 aa13.29□□□□□ -0.28
TUBE1-210ENST00000604967 HDAC9Q9UKV0 1011 aa13.29□□□□□ -0.28
TUBE1-210ENST00000604967 ECM29Q5VYK3 1845 aa13.29□□□□□ -0.28
TUBE1-210ENST00000604967 CACNB3P54284 484 aa13.28□□□□□ -0.28
TUBE1-210ENST00000604967 SPDYE2Q495Y8 402 aa13.28□□□□□ -0.28
TUBE1-210ENST00000604967 CAVIN4Q5BKX8 364 aa13.28□□□□□ -0.28
TUBE1-210ENST00000604967 APOBEC3HQ6NTF7 200 aaKnown RBP13.28□□□□□ -0.28
TUBE1-210ENST00000604967 VPS37DQ86XT2 251 aa13.28□□□□□ -0.28
TUBE1-210ENST00000604967 RASAL3Q86YV0 1011 aa13.28□□□□□ -0.28
TUBE1-210ENST00000604967 C2orf69Q8N8R5 385 aa13.28□□□□□ -0.28
TUBE1-210ENST00000604967 SSH3Q8TE77 659 aa13.28□□□□□ -0.28
TUBE1-210ENST00000604967 ZNF384Q8TF68 577 aa13.28□□□□□ -0.28
TUBE1-210ENST00000604967 TEPSINQ96N21 525 aa13.28□□□□□ -0.28
TUBE1-210ENST00000604967 ZNF70Q9UC06 446 aaPredicted RBP13.28□□□□□ -0.28
TUBE1-210ENST00000604967 SERPINA10Q9UK55 444 aa13.28□□□□□ -0.28
TUBE1-210ENST00000604967 SLC10A3P09131 477 aa13.27□□□□□ -0.29
TUBE1-210ENST00000604967 PRDX5P30044 214 aa13.27□□□□□ -0.29
TUBE1-210ENST00000604967 ECE1P42892 770 aa13.27□□□□□ -0.29
TUBE1-210ENST00000604967 MMP14P50281 582 aa13.27□□□□□ -0.29
TUBE1-210ENST00000604967 LBX1P52954 281 aa13.27□□□□□ -0.29
TUBE1-210ENST00000604967 ATP8B2P98198 1209 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms