RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 RGMBQ6NW40 437 aa22.68■■□□□ 1.22
CCDC12-208ENST00000603885 KLHDC4Q8TBB5 520 aa22.68■■□□□ 1.22
CCDC12-208ENST00000603885 ARHGAP45Q92619 1136 aa22.68■■□□□ 1.22
CCDC12-208ENST00000603885 HDAC5Q9UQL6 1122 aa22.68■■□□□ 1.22
CCDC12-208ENST00000603885 HNRNPUQ00839 825 aaKnown RBP eCLIP22.67■■□□□ 1.223e-6■□□□□ 9.8
CCDC12-208ENST00000603885 NOGQ13253 232 aa22.67■■□□□ 1.22
CCDC12-208ENST00000603885 TDRD7Q8NHU6 1098 aaKnown RBP22.67■■□□□ 1.22
CCDC12-208ENST00000603885 FAM84BQ96KN1 310 aaPredicted RBP22.67■■□□□ 1.22
CCDC12-208ENST00000603885 SCAF8Q9UPN6 1271 aaKnown RBP22.67■■□□□ 1.22
CCDC12-208ENST00000603885 JAG2Q9Y219 1238 aa22.67■■□□□ 1.22
CCDC12-208ENST00000603885 FAM205AQ6ZU69 1335 aa22.66■■□□□ 1.22
CCDC12-208ENST00000603885 F8W031 263 aaPredicted RBP22.66■■□□□ 1.22
CCDC12-208ENST00000603885 PDE8BO95263 885 aa22.66■■□□□ 1.22
CCDC12-208ENST00000603885 FKBP1BP68106 108 aa22.66■■□□□ 1.22
CCDC12-208ENST00000603885 DLGAP5Q15398 846 aa22.66■■□□□ 1.22
CCDC12-208ENST00000603885 VPS37DQ86XT2 251 aa22.66■■□□□ 1.22
CCDC12-208ENST00000603885 APOBEC3FQ8IUX4 373 aaKnown RBP22.66■■□□□ 1.22
CCDC12-208ENST00000603885 VGLL2Q8N8G2 317 aa22.66■■□□□ 1.22
CCDC12-208ENST00000603885 ZBED3Q96IU2 234 aaPredicted RBP22.66■■□□□ 1.22
CCDC12-208ENST00000603885 HSPA8P11142 646 aaKnown RBP22.65■■□□□ 1.22
CCDC12-208ENST00000603885 RFX5P48382 616 aaPredicted RBP22.65■■□□□ 1.22
CCDC12-208ENST00000603885 LBX1P52954 281 aa22.65■■□□□ 1.22
CCDC12-208ENST00000603885 MTMR14Q8NCE2 650 aa22.65■■□□□ 1.22
CCDC12-208ENST00000603885 CCDC102AQ96A19 550 aa22.65■■□□□ 1.22
CCDC12-208ENST00000603885 PAPPA2Q9BXP8 1791 aa22.65■■□□□ 1.22
CCDC12-208ENST00000603885 EYA2O00167 538 aa22.64■■□□□ 1.21
CCDC12-208ENST00000603885 IPO8O15397 1037 aaKnown RBP22.64■■□□□ 1.21
CCDC12-208ENST00000603885 ZNF157P51786 506 aaPredicted RBP22.64■■□□□ 1.21
CCDC12-208ENST00000603885 CAVIN4Q5BKX8 364 aa22.64■■□□□ 1.21
CCDC12-208ENST00000603885 NF2P35240 595 aa22.63■■□□□ 1.21
CCDC12-208ENST00000603885 PTPN12Q05209 780 aaKnown RBP22.63■■□□□ 1.21
CCDC12-208ENST00000603885 MFSD14BQ5SR56 506 aa22.63■■□□□ 1.21
CCDC12-208ENST00000603885 INTS3Q68E01 1043 aaKnown RBP22.63■■□□□ 1.21
CCDC12-208ENST00000603885 FBXO33Q7Z6M2 555 aa22.63■■□□□ 1.21
CCDC12-208ENST00000603885 LRRFIP2Q9Y608 721 aaKnown RBP22.63■■□□□ 1.21
CCDC12-208ENST00000603885 FAM155AB1AL88 458 aaPredicted RBP22.62■■□□□ 1.21
CCDC12-208ENST00000603885 CA12O43570 354 aa22.62■■□□□ 1.21
CCDC12-208ENST00000603885 PUM3Q15397 648 aaKnown RBP22.62■■□□□ 1.21
CCDC12-208ENST00000603885 CFAP100Q494V2 611 aa22.62■■□□□ 1.21
CCDC12-208ENST00000603885 PRAMEF18Q5VWM3 479 aa22.62■■□□□ 1.21
CCDC12-208ENST00000603885 MEIS3Q99687 375 aa22.62■■□□□ 1.21
CCDC12-208ENST00000603885 MYO1BO43795 1136 aa22.61■■□□□ 1.21
CCDC12-208ENST00000603885 IFIT1P09914 478 aaKnown RBP22.61■■□□□ 1.21
CCDC12-208ENST00000603885 FBXO3Q9UK99 471 aa22.61■■□□□ 1.21
CCDC12-208ENST00000603885 COL1A1P02452 1464 aaPredicted RBP22.6■■□□□ 1.21
CCDC12-208ENST00000603885 SPDYE2BA6NHP3 402 aa22.6■■□□□ 1.21
CCDC12-208ENST00000603885 FRAT2O75474 233 aaPredicted RBP22.6■■□□□ 1.21
CCDC12-208ENST00000603885 BCAR3O75815 825 aa22.6■■□□□ 1.21
CCDC12-208ENST00000603885 SPDYE6P0CI01 402 aa22.6■■□□□ 1.21
CCDC12-208ENST00000603885 RBM5P52756 815 aaKnown RBP eCLIP22.6■■□□□ 1.21
CCDC12-208ENST00000603885 FRAT1Q92837 279 aaPredicted RBP22.6■■□□□ 1.21
CCDC12-208ENST00000603885 ZIC5Q96T25 663 aa22.6■■□□□ 1.21
CCDC12-208ENST00000603885 IQSEC3Q9UPP2 1182 aaPredicted RBP22.6■■□□□ 1.21
CCDC12-208ENST00000603885 ARAP2Q8WZ64 1704 aa22.6■■□□□ 1.21
CCDC12-208ENST00000603885 ECM29Q5VYK3 1845 aa22.59■■□□□ 1.21
CCDC12-208ENST00000603885 GNAI3P08754 354 aa22.59■■□□□ 1.21
CCDC12-208ENST00000603885 SLC10A3P09131 477 aa22.59■■□□□ 1.21
CCDC12-208ENST00000603885 TRIM27P14373 513 aa22.59■■□□□ 1.21
CCDC12-208ENST00000603885 FGFR2P21802 821 aa22.59■■□□□ 1.21
CCDC12-208ENST00000603885 TTLL12Q14166 644 aaPredicted RBP22.59■■□□□ 1.21
CCDC12-208ENST00000603885 ATF7IPQ6VMQ6 1270 aa22.59■■□□□ 1.21
CCDC12-208ENST00000603885 SIL1Q9H173 461 aa22.59■■□□□ 1.21
CCDC12-208ENST00000603885 TTF2Q9UNY4 1162 aaKnown RBP22.59■■□□□ 1.21
CCDC12-208ENST00000603885 PCDHAC2Q9Y5I4 1007 aa22.59■■□□□ 1.21
CCDC12-208ENST00000603885 CIAO1O76071 339 aa22.58■■□□□ 1.21
CCDC12-208ENST00000603885 SLC5A1P13866 664 aa22.58■■□□□ 1.21
CCDC12-208ENST00000603885 BCAMP50895 628 aa22.58■■□□□ 1.21
CCDC12-208ENST00000603885 CHAF1AQ13111 956 aaPredicted RBP22.58■■□□□ 1.21
CCDC12-208ENST00000603885 MOB2Q70IA6 237 aa22.58■■□□□ 1.21
CCDC12-208ENST00000603885 ATG9AQ7Z3C6 839 aa22.58■■□□□ 1.21
CCDC12-208ENST00000603885 TBC1D22AQ8WUA7 517 aa22.58■■□□□ 1.21
CCDC12-208ENST00000603885 PRMT6Q96LA8 375 aaPredicted RBP22.58■■□□□ 1.21
CCDC12-208ENST00000603885 CLRN2A0PK11 232 aa22.57■■□□□ 1.2
CCDC12-208ENST00000603885 KIF23Q02241 960 aaPredicted RBP22.57■■□□□ 1.2
CCDC12-208ENST00000603885 LPIN2Q92539 896 aa22.57■■□□□ 1.2
CCDC12-208ENST00000603885 DEFB129Q9H1M3 183 aa22.57■■□□□ 1.2
CCDC12-208ENST00000603885 SERPINA10Q9UK55 444 aa22.57■■□□□ 1.2
CCDC12-208ENST00000603885 PPP2R3BQ9Y5P8 575 aa22.57■■□□□ 1.2
CCDC12-208ENST00000603885 UBE2Q2LH0YL09 131 aa22.56■■□□□ 1.2
CCDC12-208ENST00000603885 RASAL3Q86YV0 1011 aa22.56■■□□□ 1.2
CCDC12-208ENST00000603885 VEZTQ9HBM0 779 aa22.56■■□□□ 1.2
CCDC12-208ENST00000603885 CEP126Q9P2H0 1117 aa22.56■■□□□ 1.2
CCDC12-208ENST00000603885 TSKSQ9UJT2 592 aa22.56■■□□□ 1.2
CCDC12-208ENST00000603885 IL15P40933 162 aaPredicted RBP22.55■■□□□ 1.2
CCDC12-208ENST00000603885 ARMC9Q7Z3E5 817 aa22.55■■□□□ 1.2
CCDC12-208ENST00000603885 COPRSQ9NQ92 184 aa22.55■■□□□ 1.2
CCDC12-208ENST00000603885 ATP2B3Q16720 1220 aa22.54■■□□□ 1.2
CCDC12-208ENST00000603885 ZKSCAN2Q63HK3 967 aa22.54■■□□□ 1.2
CCDC12-208ENST00000603885 CLUAP1Q96AJ1 413 aa22.54■■□□□ 1.2
CCDC12-208ENST00000603885 PA2G4Q9UQ80 394 aaKnown RBP22.54■■□□□ 1.2
CCDC12-208ENST00000603885 TNNQ9UQP3 1299 aa22.54■■□□□ 1.2
CCDC12-208ENST00000603885 ZBED9Q6R2W3 1325 aa22.54■■□□□ 1.2
CCDC12-208ENST00000603885 CRKP46108 304 aa22.53■■□□□ 1.2
CCDC12-208ENST00000603885 PRKG1Q13976 671 aa22.53■■□□□ 1.2
CCDC12-208ENST00000603885 REM2Q8IYK8 340 aaPredicted RBP22.53■■□□□ 1.2
CCDC12-208ENST00000603885 AOX1Q06278 1338 aa22.53■■□□□ 1.2
CCDC12-208ENST00000603885 SRGAP3O43295 1099 aa22.52■■□□□ 1.2
CCDC12-208ENST00000603885 CAPN15O75808 1086 aa22.52■■□□□ 1.2
CCDC12-208ENST00000603885 MTX1Q13505 466 aa22.52■■□□□ 1.2
CCDC12-208ENST00000603885 TNFAIP1Q13829 316 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms