RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 A0A1B0GUL6 1792 aa20.54■□□□□ 0.88
TUBE1-206ENST00000603722 BRPF1P55201 1214 aaPredicted RBP20.54■□□□□ 0.88
TUBE1-206ENST00000603722 PRAMEF18Q5VWM3 479 aa20.54■□□□□ 0.88
TUBE1-206ENST00000603722 UBTFL1P0CB47 393 aaPredicted RBP20.53■□□□□ 0.88
TUBE1-206ENST00000603722 HIBADHP31937 336 aaKnown RBP20.53■□□□□ 0.88
TUBE1-206ENST00000603722 NOGQ13253 232 aa20.53■□□□□ 0.88
TUBE1-206ENST00000603722 ZIC5Q96T25 663 aa20.53■□□□□ 0.88
TUBE1-206ENST00000603722 FAM155AB1AL88 458 aaPredicted RBP20.52■□□□□ 0.88
TUBE1-206ENST00000603722 ZNF157P51786 506 aaPredicted RBP20.52■□□□□ 0.88
TUBE1-206ENST00000603722 FKBP1AP62942 108 aaKnown RBP20.52■□□□□ 0.88
TUBE1-206ENST00000603722 DLGAP5Q15398 846 aa20.52■□□□□ 0.88
TUBE1-206ENST00000603722 VGLL2Q8N8G2 317 aa20.52■□□□□ 0.88
TUBE1-206ENST00000603722 ZBED3Q96IU2 234 aaPredicted RBP20.52■□□□□ 0.88
TUBE1-206ENST00000603722 FAM84BQ96KN1 310 aaPredicted RBP20.52■□□□□ 0.88
TUBE1-206ENST00000603722 TSKSQ9UJT2 592 aa20.52■□□□□ 0.88
TUBE1-206ENST00000603722 KIF16BQ96L93 1317 aa20.52■□□□□ 0.87
TUBE1-206ENST00000603722 APOBEC3FQ8IUX4 373 aaKnown RBP20.51■□□□□ 0.87
TUBE1-206ENST00000603722 TDRD7Q8NHU6 1098 aaKnown RBP20.51■□□□□ 0.87
TUBE1-206ENST00000603722 PCDHAC2Q9Y5I4 1007 aa20.51■□□□□ 0.87
TUBE1-206ENST00000603722 FAM205AQ6ZU69 1335 aa20.51■□□□□ 0.87
TUBE1-206ENST00000603722 CAPN15O75808 1086 aa20.5■□□□□ 0.87
TUBE1-206ENST00000603722 PDE8BO95263 885 aa20.5■□□□□ 0.87
TUBE1-206ENST00000603722 RFX5P48382 616 aaPredicted RBP20.5■□□□□ 0.87
TUBE1-206ENST00000603722 FKBP1BP68106 108 aa20.5■□□□□ 0.87
TUBE1-206ENST00000603722 CFAP100Q494V2 611 aa20.5■□□□□ 0.87
TUBE1-206ENST00000603722 MOB2Q70IA6 237 aa20.5■□□□□ 0.87
TUBE1-206ENST00000603722 VPS37DQ86XT2 251 aa20.5■□□□□ 0.87
TUBE1-206ENST00000603722 CCDC102AQ96A19 550 aa20.5■□□□□ 0.87
TUBE1-206ENST00000603722 HNRNPUQ00839 825 aaKnown RBP eCLIP20.49■□□□□ 0.87
TUBE1-206ENST00000603722 MFSD14BQ5SR56 506 aa20.49■□□□□ 0.87
TUBE1-206ENST00000603722 MTMR14Q8NCE2 650 aa20.49■□□□□ 0.87
TUBE1-206ENST00000603722 EYA2O00167 538 aa20.48■□□□□ 0.87
TUBE1-206ENST00000603722 SLC10A3P09131 477 aa20.48■□□□□ 0.87
TUBE1-206ENST00000603722 PTPN12Q05209 780 aaKnown RBP20.48■□□□□ 0.87
TUBE1-206ENST00000603722 TTLL12Q14166 644 aaPredicted RBP20.48■□□□□ 0.87
TUBE1-206ENST00000603722 CAVIN4Q5BKX8 364 aa20.48■□□□□ 0.87
TUBE1-206ENST00000603722 MEIS3Q99687 375 aa20.48■□□□□ 0.87
TUBE1-206ENST00000603722 IQSEC3Q9UPP2 1182 aaPredicted RBP20.48■□□□□ 0.87
TUBE1-206ENST00000603722 LRRFIP2Q9Y608 721 aaKnown RBP20.48■□□□□ 0.87
TUBE1-206ENST00000603722 CLRN2A0PK11 232 aa20.47■□□□□ 0.87
TUBE1-206ENST00000603722 SPDYE2BA6NHP3 402 aa20.47■□□□□ 0.87
TUBE1-206ENST00000603722 UBE2Q2LH0YL09 131 aa20.47■□□□□ 0.87
TUBE1-206ENST00000603722 CA12O43570 354 aa20.47■□□□□ 0.87
TUBE1-206ENST00000603722 SPDYE6P0CI01 402 aa20.47■□□□□ 0.87
TUBE1-206ENST00000603722 NF2P35240 595 aa20.47■□□□□ 0.87
TUBE1-206ENST00000603722 RBM5P52756 815 aaKnown RBP eCLIP20.47■□□□□ 0.87
TUBE1-206ENST00000603722 KIF23Q02241 960 aaPredicted RBP20.47■□□□□ 0.87
TUBE1-206ENST00000603722 CHAF1AQ13111 956 aaPredicted RBP20.47■□□□□ 0.87
TUBE1-206ENST00000603722 PUM3Q15397 648 aaKnown RBP20.47■□□□□ 0.87
TUBE1-206ENST00000603722 FBXO33Q7Z6M2 555 aa20.47■□□□□ 0.87
TUBE1-206ENST00000603722 RASAL3Q86YV0 1011 aa20.47■□□□□ 0.87
TUBE1-206ENST00000603722 ARHGAP45Q92619 1136 aa20.47■□□□□ 0.87
TUBE1-206ENST00000603722 PAPPA2Q9BXP8 1791 aa20.46■□□□□ 0.87
TUBE1-206ENST00000603722 MYO1BO43795 1136 aa20.46■□□□□ 0.87
TUBE1-206ENST00000603722 FRAT2O75474 233 aaPredicted RBP20.46■□□□□ 0.87
TUBE1-206ENST00000603722 PRMT6Q96LA8 375 aaPredicted RBP20.46■□□□□ 0.87
TUBE1-206ENST00000603722 SIL1Q9H173 461 aa20.46■□□□□ 0.87
TUBE1-206ENST00000603722 TTF2Q9UNY4 1162 aaKnown RBP20.46■□□□□ 0.87
TUBE1-206ENST00000603722 AOX1Q06278 1338 aa20.46■□□□□ 0.87
TUBE1-206ENST00000603722 BCAR3O75815 825 aa20.45■□□□□ 0.86
TUBE1-206ENST00000603722 FGFR2P21802 821 aa20.45■□□□□ 0.86
TUBE1-206ENST00000603722 BCAMP50895 628 aa20.45■□□□□ 0.86
TUBE1-206ENST00000603722 PRKG1Q13976 671 aa20.45■□□□□ 0.86
TUBE1-206ENST00000603722 FRAT1Q92837 279 aaPredicted RBP20.45■□□□□ 0.86
TUBE1-206ENST00000603722 DEFB129Q9H1M3 183 aa20.45■□□□□ 0.86
TUBE1-206ENST00000603722 VEZTQ9HBM0 779 aa20.45■□□□□ 0.86
TUBE1-206ENST00000603722 COL1A1P02452 1464 aaPredicted RBP20.44■□□□□ 0.86
TUBE1-206ENST00000603722 IFIT1P09914 478 aaKnown RBP20.44■□□□□ 0.86
TUBE1-206ENST00000603722 INTS3Q68E01 1043 aaKnown RBP20.44■□□□□ 0.86
TUBE1-206ENST00000603722 ATG9AQ7Z3C6 839 aa20.44■□□□□ 0.86
TUBE1-206ENST00000603722 HDAC5Q9UQL6 1122 aa20.44■□□□□ 0.86
TUBE1-206ENST00000603722 IPO8O15397 1037 aaKnown RBP20.43■□□□□ 0.86
TUBE1-206ENST00000603722 TRIM27P14373 513 aa20.43■□□□□ 0.86
TUBE1-206ENST00000603722 GRIK5Q16478 980 aa20.43■□□□□ 0.86
TUBE1-206ENST00000603722 LPIN2Q92539 896 aa20.43■□□□□ 0.86
TUBE1-206ENST00000603722 SERPINA10Q9UK55 444 aa20.43■□□□□ 0.86
TUBE1-206ENST00000603722 TNNQ9UQP3 1299 aa20.43■□□□□ 0.86
TUBE1-206ENST00000603722 CIAO1O76071 339 aa20.42■□□□□ 0.86
TUBE1-206ENST00000603722 SLC5A1P13866 664 aa20.42■□□□□ 0.86
TUBE1-206ENST00000603722 ATF7IPQ6VMQ6 1270 aa20.42■□□□□ 0.86
TUBE1-206ENST00000603722 PA2G4Q9UQ80 394 aaKnown RBP20.42■□□□□ 0.86
TUBE1-206ENST00000603722 PPP2R3BQ9Y5P8 575 aa20.42■□□□□ 0.86
TUBE1-206ENST00000603722 GNAI3P08754 354 aa20.41■□□□□ 0.86
TUBE1-206ENST00000603722 CRKP46108 304 aa20.41■□□□□ 0.86
TUBE1-206ENST00000603722 ARMC9Q7Z3E5 817 aa20.41■□□□□ 0.86
TUBE1-206ENST00000603722 TBC1D22AQ8WUA7 517 aa20.41■□□□□ 0.86
TUBE1-206ENST00000603722 FBXO3Q9UK99 471 aa20.41■□□□□ 0.86
TUBE1-206ENST00000603722 FZD1Q9UP38 647 aa20.41■□□□□ 0.86
TUBE1-206ENST00000603722 SSC5DA1L4H1 1573 aa20.4■□□□□ 0.86
TUBE1-206ENST00000603722 CLUAP1Q96AJ1 413 aa20.4■□□□□ 0.86
TUBE1-206ENST00000603722 CSRNP1Q96S65 589 aa20.4■□□□□ 0.86
TUBE1-206ENST00000603722 ANGEL1Q9UNK9 670 aaKnown RBP20.4■□□□□ 0.86
TUBE1-206ENST00000603722 IL15P40933 162 aaPredicted RBP20.39■□□□□ 0.85
TUBE1-206ENST00000603722 MKRN3Q13064 507 aaKnown RBP20.39■□□□□ 0.85
TUBE1-206ENST00000603722 ATP2B3Q16720 1220 aa20.39■□□□□ 0.85
TUBE1-206ENST00000603722 SPDYE2Q495Y8 402 aa20.39■□□□□ 0.85
TUBE1-206ENST00000603722 DZIP1LQ8IYY4 767 aaKnown RBP20.39■□□□□ 0.85
TUBE1-206ENST00000603722 TDRD3Q9H7E2 651 aaKnown RBP20.39■□□□□ 0.85
TUBE1-206ENST00000603722 SAGE1Q9NXZ1 904 aa20.39■□□□□ 0.85
TUBE1-206ENST00000603722 CEP126Q9P2H0 1117 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms