RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 NEXMIFQ5QGS0 1516 aa12.86□□□□□ -0.35
ZNF559-213ENST00000603380 XRN1Q8IZH2 1706 aaKnown RBP12.86□□□□□ -0.35
ZNF559-213ENST00000603380 MINK1Q8N4C8 1332 aaPredicted RBP12.86□□□□□ -0.35
ZNF559-213ENST00000603380 NPHP4O75161 1426 aaPredicted RBP12.85□□□□□ -0.35
ZNF559-213ENST00000603380 TMEM232C9JQI7 657 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 IKBKBO14920 756 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.35
ZNF559-213ENST00000603380 NLRP12P59046 1061 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 SCRN1Q12765 414 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 NUTM2DQ5VT03 806 aaPredicted RBP12.85□□□□□ -0.35
ZNF559-213ENST00000603380 FAXDC2Q96IV6 333 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 BIN1O00499 593 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 GLRX3O76003 335 aaKnown RBP12.85□□□□□ -0.35
ZNF559-213ENST00000603380 ME1P48163 572 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 GBP6Q6ZN66 633 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 MRPS27Q92552 414 aaKnown RBP12.85□□□□□ -0.35
ZNF559-213ENST00000603380 MIS18AQ9NYP9 233 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 CRB1P82279 1406 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 ATP7AQ04656 1500 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 A0A1B0GVL5 298 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 GOLIM4O00461 696 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 CCT5P48643 541 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 NDUFA8P51970 172 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 PPP1R42Q7Z4L9 355 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 CEP112Q8N8E3 955 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 BAG1Q99933 345 aaPredicted RBP12.85□□□□□ -0.35
ZNF559-213ENST00000603380 CDC23Q9UJX2 597 aa12.85□□□□□ -0.35
ZNF559-213ENST00000603380 ABCC6O95255 1503 aa12.84□□□□□ -0.35
ZNF559-213ENST00000603380 TOP1P11387 765 aaKnown RBP12.84□□□□□ -0.35
ZNF559-213ENST00000603380 DDR1Q08345 913 aa12.84□□□□□ -0.35
ZNF559-213ENST00000603380 NBPF20Q3BBV1 942 aa12.84□□□□□ -0.35
ZNF559-213ENST00000603380 C11orf91Q3C1V1 193 aa12.84□□□□□ -0.35
ZNF559-213ENST00000603380 STK26Q9P289 416 aa12.84□□□□□ -0.35
ZNF559-213ENST00000603380 PCDHA7Q9UN72 937 aa12.84□□□□□ -0.35
ZNF559-213ENST00000603380 STX10O60499 249 aa12.84□□□□□ -0.35
ZNF559-213ENST00000603380 FLIIQ13045 1269 aa12.84□□□□□ -0.35
ZNF559-213ENST00000603380 KARSQ15046 597 aaKnown RBP12.84□□□□□ -0.35
ZNF559-213ENST00000603380 TBC1D22AQ8WUA7 517 aa12.84□□□□□ -0.35
ZNF559-213ENST00000603380 MRPL44Q9H9J2 332 aaKnown RBP12.84□□□□□ -0.35
ZNF559-213ENST00000603380 LMTK2Q8IWU2 1503 aa12.84□□□□□ -0.35
ZNF559-213ENST00000603380 ERCC6L2Q5T890 1561 aa12.84□□□□□ -0.35
ZNF559-213ENST00000603380 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
ZNF559-213ENST00000603380 RHOXF2BP0C7M4 288 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 MAP2K1Q02750 393 aaPredicted RBP12.83□□□□□ -0.36
ZNF559-213ENST00000603380 TBX2Q13207 712 aaPredicted RBP12.83□□□□□ -0.36
ZNF559-213ENST00000603380 CFAP100Q494V2 611 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 RHOXF2Q9BQY4 288 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 MCM8Q9UJA3 840 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 PTPRMP28827 1452 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 EBAG9O00559 213 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 CBFA2T2O43439 604 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 ELF1P32519 619 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 ATL3Q6DD88 541 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 NAA16Q6N069 864 aaPredicted RBP12.83□□□□□ -0.36
ZNF559-213ENST00000603380 POTEDQ86YR6 584 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 FAM227BQ96M60 508 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 GBP3Q9H0R5 595 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 ACBD3Q9H3P7 528 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 VIPAS39Q9H9C1 493 aa12.83□□□□□ -0.36
ZNF559-213ENST00000603380 ZC3H4Q9UPT8 1303 aaKnown RBP12.83□□□□□ -0.36
ZNF559-213ENST00000603380 SERPINC1P01008 464 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 UBTFL1P0CB47 393 aaPredicted RBP12.82□□□□□ -0.36
ZNF559-213ENST00000603380 ADALQ6DHV7 355 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 ILDR1Q86SU0 546 aaPredicted RBP12.82□□□□□ -0.36
ZNF559-213ENST00000603380 IGSF22Q8N9C0 903 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 GIMAP7Q8NHV1 300 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 DESI2Q9BSY9 194 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 TFRCP02786 760 aaKnown RBP12.82□□□□□ -0.36
ZNF559-213ENST00000603380 INPP5BP32019 993 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 FNTAP49354 379 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 TUBB4BP68371 445 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 NEDD9Q14511 834 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 TC2NQ8N9U0 490 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 CABS1Q96KC9 395 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 A0A1W2PQ27 194 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 A0A1W2PQ64 194 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 A0A1W2PQD8 194 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 IRF6O14896 467 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 SLC3A2P08195 630 aaKnown RBP12.82□□□□□ -0.36
ZNF559-213ENST00000603380 ZNF396Q96N95 335 aaPredicted RBP12.82□□□□□ -0.36
ZNF559-213ENST00000603380 SNRKQ9NRH2 765 aa12.82□□□□□ -0.36
ZNF559-213ENST00000603380 IRAK1P51617 712 aa12.81□□□□□ -0.36
ZNF559-213ENST00000603380 MTX1Q13505 466 aa12.81□□□□□ -0.36
ZNF559-213ENST00000603380 JMYQ8N9B5 988 aa12.81□□□□□ -0.36
ZNF559-213ENST00000603380 ZKSCAN4Q969J2 545 aaPredicted RBP12.81□□□□□ -0.36
ZNF559-213ENST00000603380 KAT14Q9H8E8 782 aa12.81□□□□□ -0.36
ZNF559-213ENST00000603380 KIF3CO14782 793 aa12.8□□□□□ -0.36
ZNF559-213ENST00000603380 NMIQ13287 307 aaPredicted RBP12.8□□□□□ -0.36
ZNF559-213ENST00000603380 CTCFLQ8NI51 663 aaPredicted RBP12.8□□□□□ -0.36
ZNF559-213ENST00000603380 CDK19Q9BWU1 502 aa12.8□□□□□ -0.36
ZNF559-213ENST00000603380 SIL1Q9H173 461 aa12.8□□□□□ -0.36
ZNF559-213ENST00000603380 NPATQ14207 1427 aa12.8□□□□□ -0.36
ZNF559-213ENST00000603380 N4BP2Q86UW6 1770 aaPredicted RBP12.8□□□□□ -0.36
ZNF559-213ENST00000603380 FOSBP53539 338 aa12.8□□□□□ -0.36
ZNF559-213ENST00000603380 WDR93Q6P2C0 686 aa12.8□□□□□ -0.36
ZNF559-213ENST00000603380 RIN2Q8WYP3 895 aaPredicted RBP12.8□□□□□ -0.36
ZNF559-213ENST00000603380 MYO1FO00160 1098 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms