RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 MNS1Q8NEH6 495 aa17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 JRKLQ9Y4A0 524 aa17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 ERC1Q8IUD2 1116 aa17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 SMARCE1Q969G3 411 aa17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 CCDC87Q9NVE4 849 aa17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 A0A1B0GUL7 405 aa17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 ANKRD65E5RJM6 399 aa17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 NUP62CLQ9H1M0 184 aa17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 TNMDQ9H2S6 317 aa17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 CLCN6P51797 869 aa17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 TTC31Q49AM3 519 aaPredicted RBP17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 SUSD4Q5VX71 490 aa17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 CREBRFQ8IUR6 639 aa17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 AK7Q96M32 723 aa17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 MPHOSPH8Q99549 860 aa17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 CCNL1Q9UK58 526 aaPredicted RBP17.86■□□□□ 0.45
PPFIA3-206ENST00000602655 ALS2Q96Q42 1657 aa17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 SPATA31A5Q5VU36 1347 aa17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 SPATA31A7Q8IWB4 1347 aa17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 PNMA6AP0CW24 399 aaPredicted RBP17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 CCAR2Q8N163 923 aaKnown RBP17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 ZNF446Q9NWS9 450 aa17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 FOXO4P98177 505 aa17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 TYRO3Q06418 890 aa17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 FERMT3Q86UX7 667 aa17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 NLRP10Q86W26 655 aa17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 SEPT12Q8IYM1 358 aa17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 YY1AP1Q9H869 796 aa17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 NOP2P46087 812 aaKnown RBP17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 GIGYF2Q6Y7W6 1299 aaKnown RBP17.85■□□□□ 0.45
PPFIA3-206ENST00000602655 A0A0D9SFI3 127 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 IDH1O75874 414 aaKnown RBP17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 IFIT1P09914 478 aaKnown RBP17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 SLC4A8Q2Y0W8 1093 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 LEKR1Q6ZMV7 388 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 RAB11FIP4Q86YS3 637 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 RASEFQ8IZ41 740 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 PALLDQ8WX93 1383 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 MAP3K15Q6ZN16 1313 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 HAND2P61296 217 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 FAM193AP78312 1265 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 TTC39AQ5SRH9 613 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 USPL1Q5W0Q7 1092 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 CHST3Q7LGC8 479 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 SLC51AQ86UW1 340 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 TEX13AQ9BXU3 409 aaPredicted RBP17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 RRP15Q9Y3B9 282 aaKnown RBP17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 XIRP1Q702N8 1843 aaKnown RBP17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 ROBO1Q9Y6N7 1651 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 BECN2A8MW95 431 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 STX6O43752 255 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 SEC31AO94979 1220 aaKnown RBP17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 ZSCAN22P10073 491 aaPredicted RBP17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 JAKMIP1Q96N16 626 aaKnown RBP17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 NCAPGQ9BPX3 1015 aa17.84■□□□□ 0.45
PPFIA3-206ENST00000602655 H7C1W4 665 aa17.83■□□□□ 0.45
PPFIA3-206ENST00000602655 CASTP20810 708 aaKnown RBP17.83■□□□□ 0.45
PPFIA3-206ENST00000602655 ZNF165P49910 485 aa17.83■□□□□ 0.45
PPFIA3-206ENST00000602655 CBX8Q9HC52 389 aa17.83■□□□□ 0.44
PPFIA3-206ENST00000602655 OAS2P29728 719 aaKnown RBP17.82■□□□□ 0.44
PPFIA3-206ENST00000602655 ZNF75DP51815 510 aa17.82■□□□□ 0.44
PPFIA3-206ENST00000602655 TTLL5Q6EMB2 1281 aa17.82■□□□□ 0.44
PPFIA3-206ENST00000602655 ZNF589Q86UQ0 364 aaPredicted RBP17.82■□□□□ 0.44
PPFIA3-206ENST00000602655 KCNG1Q9UIX4 513 aa17.82■□□□□ 0.44
PPFIA3-206ENST00000602655 TAF6LQ9Y6J9 622 aa17.82■□□□□ 0.44
PPFIA3-206ENST00000602655 DNAJC25Q9H1X3 360 aa17.82■□□□□ 0.44
PPFIA3-206ENST00000602655 EYA2O00167 538 aa17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 RNF20Q5VTR2 975 aa17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 FAM177A1Q8N128 213 aaPredicted RBP17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 LINC00116Q8NCU8 138 aa17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 ZNF219Q9P2Y4 722 aaPredicted RBP17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 CCDC171Q6TFL3 1326 aa17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 ZPR1O75312 459 aa17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 SYT1P21579 422 aa17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 PLA2G4AP47712 749 aa17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 CCDC144BQ3MJ40 725 aa17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 AMIGO3Q86WK7 504 aa17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 CCDC144CPQ8IYA2 1237 aa17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 ABCF2Q9UG63 623 aa17.81■□□□□ 0.44
PPFIA3-206ENST00000602655 ANKRD18BA2A2Z9 1011 aa17.8■□□□□ 0.44
PPFIA3-206ENST00000602655 SNW1Q13573 536 aaKnown RBP17.8■□□□□ 0.44
PPFIA3-206ENST00000602655 ADCK5Q3MIX3 580 aa17.8■□□□□ 0.44
PPFIA3-206ENST00000602655 INTS4Q96HW7 963 aaKnown RBP17.8■□□□□ 0.44
PPFIA3-206ENST00000602655 UBN2Q6ZU65 1347 aa17.8■□□□□ 0.44
PPFIA3-206ENST00000602655 SCARF1Q14162 830 aa17.8■□□□□ 0.44
PPFIA3-206ENST00000602655 BICD2Q8TD16 824 aa17.8■□□□□ 0.44
PPFIA3-206ENST00000602655 AXDND1Q5T1B0 1012 aaPredicted RBP17.8■□□□□ 0.44
PPFIA3-206ENST00000602655 FAM173BQ6P4H8 233 aa17.8■□□□□ 0.44
PPFIA3-206ENST00000602655 INTS5Q6P9B9 1019 aaKnown RBP17.8■□□□□ 0.44
PPFIA3-206ENST00000602655 NECAB1Q8N987 351 aa17.8■□□□□ 0.44
PPFIA3-206ENST00000602655 FHOD1Q9Y613 1164 aa17.8■□□□□ 0.44
PPFIA3-206ENST00000602655 RFX5P48382 616 aaPredicted RBP17.79■□□□□ 0.44
PPFIA3-206ENST00000602655 PHRF1Q9P1Y6 1649 aaKnown RBP17.79■□□□□ 0.44
PPFIA3-206ENST00000602655 CCDC69A6NI79 296 aa17.79■□□□□ 0.44
PPFIA3-206ENST00000602655 PSEN1P49768 467 aa17.79■□□□□ 0.44
PPFIA3-206ENST00000602655 GJD4Q96KN9 370 aaPredicted RBP17.79■□□□□ 0.44
PPFIA3-206ENST00000602655 DACT1Q9NYF0 836 aa17.79■□□□□ 0.44
PPFIA3-206ENST00000602655 FAM196AQ6ZSG2 479 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms